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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

1KQS

The Haloarcula marismortui 50S Complexed with a Pretranslocational Intermediate in Protein Synthesis

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1023S RRNApolymer2922946034.41GenBank (3377779)Haloarcula marismortui
295S RRNApolymer12239318.41GenBank (3377779)Haloarcula marismortui
33CCApolymer3894.61
44CC-Pmn-pcbpolymer2565.41
5ARIBOSOMAL PROTEIN L2polymer23925237.51UniProt (P20276)
Pfam (PF00181)
Pfam (PF03947)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L2P, HMAL2, HL4
6BRIBOSOMAL PROTEIN L3polymer33737265.21UniProt (P20279)
Pfam (PF00297)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L3P, HMAL3, HL1
7CRIBOSOMAL PROTEIN L4polymer24626442.11UniProt (P12735)
Pfam (PF00573)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L4E, HMAL4, HL6
8DRIBOSOMAL PROTEIN L5polymer17619420.51UniProt (P14124)
Pfam (PF00281)
Pfam (PF00673)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L5P, HMAL5, HL13
9ERIBOSOMAL PROTEIN L6polymer17719830.51UniProt (P14135)
Pfam (PF00347)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L6P, HMAL6, HL10
10FRIBOSOMAL PROTEIN L7AEpolymer11912600.81UniProt (P12743)
Pfam (PF01248)
In PDB		Haloarcula marismortui30S RIBOSOMAL PROTEIN HS6
11GRIBOSOMAL PROTEIN L10polymer34837213.81UniProt (P15825)
Pfam (PF00466)
Pfam (PF17777)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN P0, HMAL10, L10E
12HRIBOSOMAL PROTEIN L10Epolymer16718022.51Pfam (PF00252)
UniProt (by SIFTS) (P60617)
In PDB		Haloarcula marismortui
13IRIBOSOMAL PROTEIN L13polymer14516249.21UniProt (P29198)
Pfam (PF00572)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L13P, HMAL13
14JRIBOSOMAL PROTEIN L14polymer13214216.21UniProt (P22450)
Pfam (PF00238)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L14P, HMAL14, HL27
15KRIBOSOMAL PROTEIN L15polymer16417874.21UniProt (P12737)
Pfam (PF00828)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L15P, HMAL15, HL9
16LRIBOSOMAL PROTEIN L15Epolymer19422856.61Pfam (PF00827)
UniProt (by SIFTS) (P60618)
In PDB		Haloarcula marismortui
17MRIBOSOMAL PROTEIN L18polymer18620509.71UniProt (P14123)
Pfam (PF17144)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L18P, HMAL18, HL12
18NRIBOSOMAL PROTEIN L18Epolymer11512307.71UniProt (P12733)
Pfam (PF00828)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L18E, HL29, L19
19ORIBOSOMAL PROTEIN L19Epolymer14816631.31UniProt (P14119)
Pfam (PF01280)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L19E, HMAL19, HL24
20PRIBOSOMAL PROTEIN L21Epolymer9510436.61UniProt (P12734)
Pfam (PF01157)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L21E, HL31
21QRIBOSOMAL PROTEIN L22polymer15416835.71UniProt (P10970)
Pfam (PF00237)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L22P, HMAL22, HL23
22RRIBOSOMAL PROTEIN L23polymer849481.31UniProt (P12732)
Pfam (PF00276)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L23P, HMAL23, HL25, L21
23SRIBOSOMAL PROTEIN L24polymer11913539.81UniProt (P10972)
Pfam (PF16906)
Pfam (PF00467)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L24P, HMAL24, HL16, HL15
24TRIBOSOMAL PROTEIN L24Epolymer667233.71UniProt (P14116)
Pfam (PF01246)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L24E, HL21/HL22
25URIBOSOMAL PROTEIN L29polymer707758.71UniProt (P10971)
Pfam (PF00831)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L29P, HMAL29, HL33
26VRIBOSOMAL PROTEIN L30polymer15417062.91UniProt (P14121)
Pfam (PF00327)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L30P, HMAL30, HL20, HL16
27WRIBOSOMAL PROTEIN L31Epolymer9110253.41UniProt (P18138)
Pfam (PF01198)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L31E, L34, HL30
28XRIBOSOMAL PROTEIN L32Epolymer24026324.51UniProt (P12736)
Pfam (PF14520)
Pfam (PF01655)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L32E, HL5
29YRIBOSOMAL PROTEIN L37Aepolymer738097.81Pfam (PF01780)
UniProt (by SIFTS) (P60619)
In PDB		Haloarcula marismortui
30ZRIBOSOMAL PROTEIN L37Epolymer566199.01UniProt (P32410)
Pfam (PF01907)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L37E, L35E
311RIBOSOMAL PROTEIN L39Epolymer485844.71UniProt (P22452)
Pfam (PF00832)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEINS L39E, HL39E, HL46E
322RIBOSOMAL PROTEIN L44Epolymer9210815.21UniProt (P32411)
Pfam (PF00935)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L44E, LA, HLA
330, A, X, Y, 2...MAGNESIUM IONnon-polymer24.3117Chemie (MG)
340POTASSIUM IONnon-polymer39.12Chemie (K)
350, A, C, H, I...SODIUM IONnon-polymer23.086Chemie (NA)
36X, A, B, I, 2...CHLORIDE IONnon-polymer35.522Chemie (CL)
374PUROMYCIN-5'-MONOPHOSPHATEnon-polymer551.51Chemie (PPU)
384PHENYLALANINALnon-polymer149.21Chemie (PHA)
3946-AMINOHEXANOIC ACIDnon-polymer131.21Chemie (ACA)
404BIOTINnon-polymer244.31Chemie (BTN)
41Y, Z, 2, N, TCADMIUM IONnon-polymer112.45Chemie (CD)
42waterwater18.07871Chemie (HOH)
Sequence modifications
0: 2 - 2923 (GenBank: 3377779)
PDBExternal DatabaseDetails
C 560U 3155conflict
B: 1 - 337 (UniProt: P20279)
PDBExternal DatabaseDetails
-Pro 310deletion
Arg 310Phe 311conflict
O: 1 - 148 (UniProt: P14119)
PDBExternal DatabaseDetails
Lys 71Tyr 71conflict
1: 1 - 48 (UniProt: P22452)
PDBExternal DatabaseDetails
-Arg 31deletion
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains32
Total formula weight1453374.2
Non-Polymers*Number of molecules236
Total formula weight7317.2
All*Total formula weight1460691.4
*Water molecules are not included.

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PDB entries from 2024-05-01

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