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1H8D

X-ray structure of the human alpha-thrombin complex with a tripeptide phosphonate inhibitor.

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(H)
THROMBINpolymer26029797.41UniProt (P00734)
Pfam (PF00089)
HOMO SAPIENS (HUMAN)COAGULATION FACTOR II
2B
(I)
HIRUDIN Ipolymer101363.41UniProt (P01050)HIRUDO MEDICINALIS (MEDICINAL LEECH)LEPIRUDIN
3C
(L)
THROMBINpolymer293404.81UniProt (P00734)
Pfam (PF09396)
HOMO SAPIENS (HUMAN)COAGULATION FACTOR II
4D
(H)
N-[(benzyloxy)carbonyl]-beta-phenyl-D-phenylalanyl-N-{(1S,3E)-1-[dihydroxy(diphenoxy)-lambda~5~-phosphanyl]-4-methoxybut-3-en-1-yl}-L-prolinamidenon-polymer805.91Chemie (PHW)
5E, F, G
(H, I, L)
waterwater18.0684Chemie (HOH)
Sequence modifications
H: 16 - 147 (UniProt: P00734)
H: 150 - 259 (UniProt: P00734)
H: 261 - 268 (PDB: 1H8D)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight34565.6
Non-Polymers*Number of molecules1
Total formula weight805.9
All*Total formula weight35371.5
*Water molecules are not included.

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PDB entries from 2025-06-25

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