1GXS
Crystal Structure of Hydroxynitrile Lyase from Sorghum bicolor in Complex with Inhibitor Benzoic Acid: a novel cyanogenic enzyme
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, C | P-(S)-HYDROXYMANDELONITRILE LYASE CHAIN A | polymer | 270 | 30395.6 | 2 | UniProt (Q8W4X3) Pfam (PF00450) UniProt (by SIFTS) (P52708) In PDB | SORGHUM BICOLOR (SORGHUM) | HNL, HYDROXYNITRILE LYASE |
2 | B, D | P-(S)-HYDROXYMANDELONITRILE LYASE CHAIN B | polymer | 158 | 17713.1 | 2 | UniProt (Q8W4X3) Pfam (PF00450) UniProt (by SIFTS) (P52708) In PDB | SORGHUM BICOLOR (SORGHUM) | HNL, HYDROXYNITRILE LYASE |
3 | E, F | beta-L-fucopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 570.5 | 2 | In PDB GlyTouCan (G46874CY) | |||
4 | A, C | BENZOIC ACID | non-polymer | 122.1 | 2 | Chemie (BEZ) | |||
5 | A, C | DECANOIC ACID | non-polymer | 172.3 | 2 | Chemie (DKA) | |||
6 | B, D | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) | |||
7 | water | water | 18.0 | 331 | Chemie (HOH) |
Sequence modifications
A, C: 1 - 270 (UniProt: Q8W4X3)
B, D: 283 - 440 (UniProt: Q8W4X3)
PDB | External Database | Details |
---|---|---|
Leu 11 | Pro 66 | variant |
Ala 79 | Pro 134 | variant |
Gly 112 | Val 167 | variant |
Ser 203 | Leu 258 | variant |
PDB | External Database | Details |
---|---|---|
Thr 408 | Ser 463 | variant |
Val 409 | Pro 464 | variant |
Arg 410 | Ser 465 | variant |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 96217.3 | |
Branched | Number of molecules | 2 |
Total formula weight | 1141.1 | |
Non-Polymers* | Number of molecules | 6 |
Total formula weight | 1031.2 | |
All* | Total formula weight | 98389.6 |