Loading
PDBj
English日本語简体中文繁體中文한국어
✖
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

1FFK

CRYSTAL STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT FROM HALOARCULA MARISMORTUI AT 2.4 ANGSTROM RESOLUTION

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(0)		23S RRNApolymer2922946034.41GenBank (3377779)Haloarcula marismortui
2B
(9)		5S RRNApolymer12239318.41GenBank (3377779)Haloarcula marismortui
3C
(A)		RIBOSOMAL PROTEIN L2polymer23925237.51UniProt (P20276)
Pfam (PF00181)
Pfam (PF03947)		Haloarcula marismortui50S RIBOSOMAL PROTEIN L2P, HMAL2, HL4
4D
(B)		RIBOSOMAL PROTEIN L3polymer33737223.21UniProt (P20279)
Pfam (PF00297)		Haloarcula marismortui50S RIBOSOMAL PROTEIN L3P, HMAL3, HL1
5E
(C)		RIBOSOMAL PROTEIN L4polymer24626443.11UniProt (P12735)
Pfam (PF00573)		Haloarcula marismortui50S RIBOSOMAL PROTEIN L4E, HMAL4, HL6
6F
(D)		RIBOSOMAL PROTEIN L5polymer17619420.51UniProt (P14124)
Pfam (PF00281)
Pfam (PF00673)		Haloarcula marismortui50S RIBOSOMAL PROTEIN L5P, HMAL5, HL13
7G
(E)		RIBOSOMAL PROTEIN L7AEpolymer11912600.81UniProt (P12743)
Pfam (PF01248)		Haloarcula marismortui30S RIBOSOMAL PROTEIN HS6
8H
(F)		RIBOSOMAL PROTEIN L10Epolymer15717231.41Pfam (PF00252)
UniProt (by SIFTS) (P60617)		Haloarcula marismortui
9I
(G)		RIBOSOMAL PROTEIN L13polymer14516249.21UniProt (P29198)
Pfam (PF00572)		Haloarcula marismortui50S RIBOSOMAL PROTEIN L13P, HMAL13
10J
(H)		RIBOSOMAL PROTEIN L14polymer13214216.21UniProt (P22450)
Pfam (PF00238)		Haloarcula marismortui50S RIBOSOMAL PROTEIN L14P, HMAL14, HL27
11K
(I)		RIBOSOMAL PROTEIN L15Epolymer19423372.61Pfam (PF00827)
UniProt (by SIFTS) (P60618)		Haloarcula marismortui
12L
(J)		RIBOSOMAL PROTEIN L15polymer16417874.21UniProt (P12737)
Pfam (PF00828)		Haloarcula marismortui50S RIBOSOMAL PROTEIN L15P, HMAL15, HL9
13M
(K)		RIBOSOMAL PROTEIN L18polymer18620509.71UniProt (P14123)
Pfam (PF17144)		Haloarcula marismortui50S RIBOSOMAL PROTEIN L18P, HMAL18, HL12
14N
(L)		RIBOSOMAL PROTEIN L18Epolymer11512307.71UniProt (P12733)
Pfam (PF00828)		Haloarcula marismortui50S RIBOSOMAL PROTEIN L18E, HL29, L19
15O
(M)		RIBOSOMAL PROTEIN L19polymer14816631.31UniProt (P14119)
Pfam (PF01280)		Haloarcula marismortui50S RIBOSOMAL PROTEIN L19E, HMAL19, HL24
16P
(N)		RIBOSOMAL PROTEIN L21Epolymer9510436.61UniProt (P12734)
Pfam (PF01157)		Haloarcula marismortui50S RIBOSOMAL PROTEIN L21E, HL31
17Q
(O)		RIBOSOMAL PROTEIN L22polymer15416835.71UniProt (P10970)
Pfam (PF00237)		Haloarcula marismortui50S RIBOSOMAL PROTEIN L22P, HMAL22, HL23
18R
(P)		RIBOSOMAL PROTEIN L23polymer849481.31UniProt (P12732)
Pfam (PF00276)		Haloarcula marismortui50S RIBOSOMAL PROTEIN L23P, HMAL23, HL25, L21
19S
(Q)		RIBOSOMAL PROTEIN L24polymer11913539.81UniProt (P10972)
Pfam (PF16906)
Pfam (PF00467)		Haloarcula marismortui50S RIBOSOMAL PROTEIN L24P, HMAL24, HL16, HL15
20T
(R)		RIBOSOMAL PROTEIN L24Epolymer667233.71UniProt (P14116)
Pfam (PF01246)		Haloarcula marismortui50S RIBOSOMAL PROTEIN L24E, HL21/HL22
21U
(S)		RIBOSOMAL PROTEIN L29polymer707758.71UniProt (P10971)
Pfam (PF00831)		Haloarcula marismortui50S RIBOSOMAL PROTEIN L29P, HMAL29, HL33
22V
(T)		RIBOSOMAL PROTEIN L30polymer15417062.91UniProt (P14121)
Pfam (PF00327)		Haloarcula marismortui50S RIBOSOMAL PROTEIN L30P, HMAL30, HL20, HL16
23W
(U)		RIBOSOMAL PROTEIN L31Epolymer9110253.41UniProt (P18138)
Pfam (PF01198)		Haloarcula marismortui50S RIBOSOMAL PROTEIN L31E, L34, HL30
24X
(V)		RIBOSOMAL PROTEIN L32Epolymer14316223.11UniProt (P12736)
Pfam (PF01655)		Haloarcula marismortui50S RIBOSOMAL PROTEIN L32E, HL5
25Y
(W)		RIBOSOMAL PROTEIN L37AEpolymer738085.71Pfam (PF01780)
UniProt (by SIFTS) (P60619)		Haloarcula marismortui
26Z
(X)		RIBOSOMAL PROTEIN L37Epolymer566199.01UniProt (P32410)
Pfam (PF01907)		Haloarcula marismortui50S RIBOSOMAL PROTEIN L37E, L35E
27AA
(Y)		RIBOSOMAL PROTEIN L39Epolymer495994.91UniProt (P22452)
Pfam (PF00832)		Haloarcula marismortui50S RIBOSOMAL PROTEINS L39E, HL39E, HL46E
28BA
(Z)		RIBOSOMAL PROTEIN L44Epolymer9210815.21UniProt (P32411)
Pfam (PF00935)		Haloarcula marismortui50S RIBOSOMAL PROTEIN L44E, LA, HLA
29CA
(1)		RIBOSOMAL PROTEIN L6polymer17719830.51UniProt (P14135)
Pfam (PF00347)		Haloarcula marismortui50S RIBOSOMAL PROTEIN L6P, HMAL6, HL10
30DA
(0)		POTASSIUM IONnon-polymer39.11Chemie (K)
31EA, FA
(0)		MAGNESIUM IONnon-polymer24.32Chemie (MG)
32GA, HA, IA, JA
(R, W, X, Z)		CADMIUM IONnon-polymer112.44Chemie (CD)
33KA
(0)		waterwater18.06Chemie (HOH)
Sequence modifications
0: 2 - 2923 (GenBank: 3377779)
PDBExternal DatabaseDetails
C 560U 3155conflict
B: 1 - 337 (UniProt: P20279)
PDBExternal DatabaseDetails
-Glu 67deletion
Phe 311-insertion
C: 1 - 246 (UniProt: P12735)
PDBExternal DatabaseDetails
Leu 73Gln 73conflict
K: 1 - 185 (UniProt: P14123)
PDBExternal DatabaseDetails
Leu 186-insertion
M: 1 - 148 (UniProt: P14119)
PDBExternal DatabaseDetails
Lys 71Tyr 71conflict
E: 1 - 119 (UniProt: P12743)
PDBExternal DatabaseDetails
Leu 108-insertion
Glu 109-insertion
Glu 110-insertion
V: 1 - 143 (UniProt: P12736)
PDBExternal DatabaseDetails
Asn 109Ala 206conflict
Y: 1 - 49 (UniProt: P22452)
PDBExternal DatabaseDetails
Lys 11Leu 11conflict
Tyr 24Trp 24conflict
Trp 42Tyr 42conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains29
Total formula weight1404420.9
Non-Polymers*Number of molecules7
Total formula weight537.4
All*Total formula weight1404958.2
*Water molecules are not included.

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon