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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

1FFK

CRYSTAL STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT FROM HALOARCULA MARISMORTUI AT 2.4 ANGSTROM RESOLUTION

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1023S RRNApolymer2922946034.41GenBank (3377779)Haloarcula marismortui
295S RRNApolymer12239318.41GenBank (3377779)Haloarcula marismortui
3ARIBOSOMAL PROTEIN L2polymer23925237.51UniProt (P20276)
Pfam (PF00181)
Pfam (PF03947)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L2P, HMAL2, HL4
4BRIBOSOMAL PROTEIN L3polymer33737223.21UniProt (P20279)
Pfam (PF00297)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L3P, HMAL3, HL1
5CRIBOSOMAL PROTEIN L4polymer24626443.11UniProt (P12735)
Pfam (PF00573)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L4E, HMAL4, HL6
6DRIBOSOMAL PROTEIN L5polymer17619420.51UniProt (P14124)
Pfam (PF00281)
Pfam (PF00673)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L5P, HMAL5, HL13
7ERIBOSOMAL PROTEIN L7AEpolymer11912600.81UniProt (P12743)
Pfam (PF01248)
In PDB		Haloarcula marismortui30S RIBOSOMAL PROTEIN HS6
8FRIBOSOMAL PROTEIN L10Epolymer15717231.41Pfam (PF00252)
UniProt (by SIFTS) (P60617)
In PDB		Haloarcula marismortui
9GRIBOSOMAL PROTEIN L13polymer14516249.21UniProt (P29198)
Pfam (PF00572)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L13P, HMAL13
10HRIBOSOMAL PROTEIN L14polymer13214216.21UniProt (P22450)
Pfam (PF00238)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L14P, HMAL14, HL27
11IRIBOSOMAL PROTEIN L15Epolymer19423372.61Pfam (PF00827)
UniProt (by SIFTS) (P60618)
In PDB		Haloarcula marismortui
12JRIBOSOMAL PROTEIN L15polymer16417874.21UniProt (P12737)
Pfam (PF00828)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L15P, HMAL15, HL9
13KRIBOSOMAL PROTEIN L18polymer18620509.71UniProt (P14123)
Pfam (PF17144)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L18P, HMAL18, HL12
14LRIBOSOMAL PROTEIN L18Epolymer11512307.71UniProt (P12733)
Pfam (PF00828)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L18E, HL29, L19
15MRIBOSOMAL PROTEIN L19polymer14816631.31UniProt (P14119)
Pfam (PF01280)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L19E, HMAL19, HL24
16NRIBOSOMAL PROTEIN L21Epolymer9510436.61UniProt (P12734)
Pfam (PF01157)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L21E, HL31
17ORIBOSOMAL PROTEIN L22polymer15416835.71UniProt (P10970)
Pfam (PF00237)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L22P, HMAL22, HL23
18PRIBOSOMAL PROTEIN L23polymer849481.31UniProt (P12732)
Pfam (PF00276)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L23P, HMAL23, HL25, L21
19QRIBOSOMAL PROTEIN L24polymer11913539.81UniProt (P10972)
Pfam (PF16906)
Pfam (PF00467)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L24P, HMAL24, HL16, HL15
20RRIBOSOMAL PROTEIN L24Epolymer667233.71UniProt (P14116)
Pfam (PF01246)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L24E, HL21/HL22
21SRIBOSOMAL PROTEIN L29polymer707758.71UniProt (P10971)
Pfam (PF00831)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L29P, HMAL29, HL33
22TRIBOSOMAL PROTEIN L30polymer15417062.91UniProt (P14121)
Pfam (PF00327)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L30P, HMAL30, HL20, HL16
23URIBOSOMAL PROTEIN L31Epolymer9110253.41UniProt (P18138)
Pfam (PF01198)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L31E, L34, HL30
24VRIBOSOMAL PROTEIN L32Epolymer14316223.11UniProt (P12736)
Pfam (PF01655)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L32E, HL5
25WRIBOSOMAL PROTEIN L37AEpolymer738085.71Pfam (PF01780)
UniProt (by SIFTS) (P60619)
In PDB		Haloarcula marismortui
26XRIBOSOMAL PROTEIN L37Epolymer566199.01UniProt (P32410)
Pfam (PF01907)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L37E, L35E
27YRIBOSOMAL PROTEIN L39Epolymer495994.91UniProt (P22452)
Pfam (PF00832)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEINS L39E, HL39E, HL46E
28ZRIBOSOMAL PROTEIN L44Epolymer9210815.21UniProt (P32411)
Pfam (PF00935)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L44E, LA, HLA
291RIBOSOMAL PROTEIN L6polymer17719830.51UniProt (P14135)
Pfam (PF00347)
In PDB		Haloarcula marismortui50S RIBOSOMAL PROTEIN L6P, HMAL6, HL10
300POTASSIUM IONnon-polymer39.11Chemie (K)
310MAGNESIUM IONnon-polymer24.32Chemie (MG)
32R, W, X, ZCADMIUM IONnon-polymer112.44Chemie (CD)
33waterwater18.06Chemie (HOH)
Sequence modifications
0: 2 - 2923 (GenBank: 3377779)
PDBExternal DatabaseDetails
C 560U 3155conflict
B: 1 - 337 (UniProt: P20279)
PDBExternal DatabaseDetails
-Glu 67deletion
Phe 311-insertion
C: 1 - 246 (UniProt: P12735)
PDBExternal DatabaseDetails
Leu 73Gln 73conflict
K: 1 - 185 (UniProt: P14123)
PDBExternal DatabaseDetails
Leu 186-insertion
M: 1 - 148 (UniProt: P14119)
PDBExternal DatabaseDetails
Lys 71Tyr 71conflict
E: 1 - 119 (UniProt: P12743)
PDBExternal DatabaseDetails
Leu 108-insertion
Glu 109-insertion
Glu 110-insertion
V: 1 - 143 (UniProt: P12736)
PDBExternal DatabaseDetails
Asn 109Ala 206conflict
Y: 1 - 49 (UniProt: P22452)
PDBExternal DatabaseDetails
Lys 11Leu 11conflict
Tyr 24Trp 24conflict
Trp 42Tyr 42conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains29
Total formula weight1404420.9
Non-Polymers*Number of molecules7
Total formula weight537.4
All*Total formula weight1404958.2
*Water molecules are not included.

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PDB entries from 2024-04-17

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