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1E08

Structural model of the [Fe]-Hydrogenase/cytochrome c553 complex combining NMR and soft-docking

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
[FE]-HYDROGENASE (LARGE SUBUNIT)polymer37140239.41Pfam (PF00037)
Pfam (PF02906)
UniProt (by SIFTS) (P07598)
DESULFOVIBRIO DESULFURICANS
2B
(D)
[FE]-HYDROGENASE (SMALL SUBUNIT)polymer8810082.41Pfam (PF02256)
UniProt (by SIFTS) (P07603)
DESULFOVIBRIO DESULFURICANS
3C
(E)
CYTOCHROME C553polymer788246.51Pfam (PF00034)
UniProt (by SIFTS) (P04032)
DESULFOVIBRIO VULGARIS
4D, E, F
(A)
IRON/SULFUR CLUSTERnon-polymer351.63Chemie (SF4)
5G
(A)
1,3-PROPANEDITHIOLnon-polymer108.21Chemie (PDT)
6H, I
(A)
FE (II) IONnon-polymer55.82Chemie (FE2)
7J, K
(A)
CYANIDE IONnon-polymer26.02Chemie (CYN)
8L, M
(A)
CARBON MONOXIDEnon-polymer28.02Chemie (CMO)
9N
(D)
ZINC IONnon-polymer65.41Chemie (ZN)
10O
(E)
HEME Cnon-polymer618.51Chemie (HEC)
11P
(A)
waterwater18.01Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight58568.3
Non-Polymers*Number of molecules12
Total formula weight2066.8
All*Total formula weight60635.1
*Water molecules are not included.

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PDB entries from 2025-06-18

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