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11YC

The structure of human Vacuolar Protein Sorting 34 catalytic domain bound to RD-II-123

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(B)
Phosphatidylinositol 3-kinase catalytic subunit type 3polymer59468149.91UniProt (Q8NEB9)Homo sapiens (human)PI3-kinase type 3,PI3K type 3,PtdIns-3-kinase type 3,Phosphatidylinositol 3-kinase p100 subunit,Phosphoinositide-3-kinase class 3,hVps34
2B
(B)
(8S)-3-(6-butyl-1,3-benzothiazol-2-yl)pyrazolo[1,5-a]pyrimidinenon-polymer308.41Chemie (A1DAY)
3C
(B)
1,2-ETHANEDIOLnon-polymer62.11Chemie (EDO)
4D
(B)
DI(HYDROXYETHYL)ETHERnon-polymer106.11Chemie (PEG)
PubChem (8117)
5E, F, G, H
(B)
CHLORIDE IONnon-polymer35.54Chemie (CL)
PubChem (312)
6I
(B)
waterwater18.035Chemie (HOH)
Sequence modifications
B: 290 - 871 (UniProt: Q8NEB9)
PDBExternal DatabaseDetails
Met 278-expression tag
Gly 279-expression tag
His 280-expression tag
His 281-expression tag
His 282-expression tag
His 283-expression tag
His 284-expression tag
His 285-expression tag
His 286-expression tag
His 287-expression tag
His 288-expression tag
His 289-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight68149.9
Non-Polymers*Number of molecules7
Total formula weight618.4
All*Total formula weight68768.3
*Water molecules are not included.

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PDB entries from 2026-03-25

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