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100D	CRYSTAL STRUCTURE OF THE HIGHLY DISTORTED CHIMERIC DECAMER R(C)D(CGGCGCCG)R(G)-SPERMINE COMPLEX-SPERMINE BINDING TO PHOSPHATE ONLY AND MINOR GROOVE TERTIARY BASE-PAIRING Descriptor: DNA/RNA (5'-R(*CP*)-D(*CP*GP*GP*CP*GP*CP*CP*GP*)-R(*G)-3'), SPERMINE Authors: Ban, C, Ramakrishnan, B, Sundaralingam, M. Deposit date: 1994-12-05 Release date: 1995-03-31 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Crystal structure of the highly distorted chimeric decamer r(C)d(CGGCGCCG)r(G).spermine complex--spermine binding to phosphate only and minor groove tertiary base-pairing. Nucleic Acids Res., 22, 1994
101D	REFINEMENT OF NETROPSIN BOUND TO DNA: BIAS AND FEEDBACK IN ELECTRON DENSITY MAP INTERPRETATION Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(CBR)P*GP*CP*G)-3'), MAGNESIUM ION, NETROPSIN Authors: Goodsell, D.S, Kopka, M.L, Dickerson, R.E. Deposit date: 1994-12-14 Release date: 1995-02-27 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.25 Å) Cite: Refinement of netropsin bound to DNA: bias and feedback in electron density map interpretation. Biochemistry, 34, 1995
104D	DNA DUPLEXES FLANKED BY HYBRID DUPLEXES: THE SOLUTION STRUCTURE OF CHIMERIC JUNCTIONS IN Descriptor: DNA/RNA (5'-R(*CP*GP*CP*G)-D(P*TP*AP*TP*AP*CP*GP*CP*G)-3') Authors: Zhu, L, Salazar, M, Reid, B.R. Deposit date: 1994-12-16 Release date: 1995-03-31 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: DNA duplexes flanked by hybrid duplexes: the solution structure of chimeric junctions in [r(cgcg)d(TATACGCG)]2. Biochemistry, 34, 1995
10MH	TERNARY STRUCTURE OF HHAI METHYLTRANSFERASE WITH ADOHCY AND HEMIMETHYLATED DNA CONTAINING 5,6-DIHYDRO-5-AZACYTOSINE AT THE TARGET Descriptor: DNA (5'-D(P*CP*CP*AP*TP*GP*(5CM)P*GP*CP*TP*GP*AP*C)-3'), DNA (5'-D(P*GP*TP*CP*AP*GP*5NCP*GP*CP*AP*TP*GP*G)-3'), PROTEIN (CYTOSINE-SPECIFIC METHYLTRANSFERASE HHAI), ... Authors: Sheikhnejad, G, Brank, A, Christman, J.K, Goddard, A, Alvarez, E, Ford Junior, H, Marquez, V.E, Marasco, C.J, Sufrin, J.R, O'Gara, M, Cheng, X. Deposit date: 1998-08-10 Release date: 1999-02-09 Last modified: 2023-08-09 Method: X-RAY DIFFRACTION (2.55 Å) Cite: Mechanism of inhibition of DNA (cytosine C5)-methyltransferases by oligodeoxyribonucleotides containing 5,6-dihydro-5-azacytosine. J.Mol.Biol., 285, 1999
114D	INOSINE-ADENINE BASE PAIRS IN A B-DNA DUPLEX Descriptor: DNA (5'-D(*CP*GP*CP*IP*AP*AP*TP*TP*AP*GP*CP*G)-3') Authors: Corfield, P.W.R, Hunter, W.N, Brown, T, Robinson, P, Kennard, O. Deposit date: 1993-01-04 Release date: 1993-07-15 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Inosine.adenine base pairs in a B-DNA duplex. Nucleic Acids Res., 15, 1987
116D	CRYSTAL AND MOLECULAR STRUCTURE OF THE A-DNA DODECAMER D(CCGTACGTACGG): CHOICE OF FRAGMENT HELICAL AXIS Descriptor: DNA (5'-D(*CP*CP*GP*TP*AP*CP*GP*TP*AP*CP*GP*G)-3') Authors: Bingman, C.A, Zon, G, Sundaralingam, M. Deposit date: 1993-02-10 Release date: 1993-04-15 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Crystal and molecular structure of the A-DNA dodecamer d(CCGTACGTACGG). Choice of fragment helical axis. J.Mol.Biol., 227, 1992
117D	CRYSTAL AND MOLECULAR STRUCTURE OF THE ALTERNATING DODECAMER D(GCGTACGTACGC) IN THE A-DNA FORM: COMPARISON WITH THE ISOMORPHOUS NON-ALTERNATING DODECAMER D(CCGTACGTACGG) Descriptor: DNA (5'-D(*GP*CP*GP*TP*AP*CP*GP*TP*AP*CP*GP*C)-3') Authors: Bingman, C.A, Jain, S, Zon, G, Sundaralingam, M. Deposit date: 1993-02-10 Release date: 1993-04-15 Last modified: 2023-03-22 Method: X-RAY DIFFRACTION (2.55 Å) Cite: Crystal and molecular structure of the alternating dodecamer d(GCGTACGTACGC) in the A-DNA form: comparison with the isomorphous non-alternating dodecamer d(CCGTACGTACGG). Nucleic Acids Res., 20, 1992
117E	THE R78K AND D117E ACTIVE SITE VARIANTS OF SACCHAROMYCES CEREVISIAE SOLUBLE INORGANIC PYROPHOSPHATASE: STRUCTURAL STUDIES AND MECHANISTIC IMPLICATIONS Descriptor: MANGANESE (II) ION, PHOSPHATE ION, PROTEIN (INORGANIC PYROPHOSPHATASE) Authors: Tuominen, V, Heikinheimo, P, Kajander, T, Torkkel, T, Hyytia, T, Kapyla, J, Lahti, R, Cooperman, B.S, Goldman, A. Deposit date: 1998-09-15 Release date: 1998-12-23 Last modified: 2023-08-09 Method: X-RAY DIFFRACTION (2.15 Å) Cite: The R78K and D117E active-site variants of Saccharomyces cerevisiae soluble inorganic pyrophosphatase: structural studies and mechanistic implications. J.Mol.Biol., 284, 1998
11AS	ASPARAGINE SYNTHETASE MUTANT C51A, C315A COMPLEXED WITH L-ASPARAGINE Descriptor: ASPARAGINE, ASPARAGINE SYNTHETASE Authors: Nakatsu, T, Kato, H, Oda, J. Deposit date: 1997-12-02 Release date: 1998-12-30 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Crystal structure of asparagine synthetase reveals a close evolutionary relationship to class II aminoacyl-tRNA synthetase. Nat.Struct.Biol., 5, 1998
11BA	BINDING OF A SUBSTRATE ANALOGUE TO A DOMAIN SWAPPING PROTEIN IN THE COMPLEX OF BOVINE SEMINAL RIBONUCLEASE WITH URIDYLYL-2',5'-ADENOSINE Descriptor: PROTEIN (RIBONUCLEASE, SEMINAL), SULFATE ION, ... Authors: Vitagliano, L, Adinolfi, S, Riccio, A, Sica, F, Zagari, A, Mazzarella, L. Deposit date: 1999-03-17 Release date: 1999-03-26 Last modified: 2023-08-09 Method: X-RAY DIFFRACTION (2.06 Å) Cite: Binding of a substrate analog to a domain swapping protein: X-ray structure of the complex of bovine seminal ribonuclease with uridylyl(2',5')adenosine. Protein Sci., 7, 1998
11BG	A POTENTIAL ALLOSTERIC SUBSITE GENERATED BY DOMAIN SWAPPING IN BOVINE SEMINAL RIBONUCLEASE Descriptor: PROTEIN (BOVINE SEMINAL RIBONUCLEASE), SULFATE ION, URIDYLYL-2'-5'-PHOSPHO-GUANOSINE Authors: Vitagliano, L, Adinolfi, S, Sica, F, Merlino, A, Zagari, A, Mazzarella, L. Deposit date: 1999-03-11 Release date: 1999-11-05 Last modified: 2023-08-09 Method: X-RAY DIFFRACTION (1.9 Å) Cite: A potential allosteric subsite generated by domain swapping in bovine seminal ribonuclease. J.Mol.Biol., 293, 1999
121P	STRUKTUR UND GUANOSINTRIPHOSPHAT-HYDROLYSEMECHANISMUS DES C-TERMINAL VERKUERZTEN MENSCHLICHEN KREBSPROTEINS P21-H-RAS Descriptor: H-RAS P21 PROTEIN, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER Authors: Krengel, U, Scheffzek, K, Scherer, A, Kabsch, W, Wittinghofer, A, Pai, E.F. Deposit date: 1991-06-06 Release date: 1994-01-31 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.54 Å) Cite: Struktur Und Guanosintriphosphat-Hydrolysemechanismus Des C-Terminal Verkuerzten Menschlichen Krebsproteins P21-H-Ras Thesis, 1991
124D	STRUCTURE OF A DNA:RNA HYBRID DUPLEX: WHY RNASE H DOES NOT CLEAVE PURE RNA Descriptor: DNA (5'-D(*GP*TP*CP*AP*CP*AP*TP*G)-3'), RNA (5'-R(*CP*AP*UP*GP*UP*GP*AP*C)-3') Authors: Fedoroff, O.Y, Salazar, M, Reid, B.R. Deposit date: 1993-05-07 Release date: 1993-10-31 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Structure of a DNA:RNA Hybrid Duplex. Why Rnase H Does not Cleave Pure RNA J.Mol.Biol., 233, 1993
12AS	ASPARAGINE SYNTHETASE MUTANT C51A, C315A COMPLEXED WITH L-ASPARAGINE AND AMP Descriptor: ADENOSINE MONOPHOSPHATE, ASPARAGINE, ASPARAGINE SYNTHETASE Authors: Nakatsu, T, Kato, H, Oda, J. Deposit date: 1997-12-02 Release date: 1998-12-30 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Crystal structure of asparagine synthetase reveals a close evolutionary relationship to class II aminoacyl-tRNA synthetase. Nat.Struct.Biol., 5, 1998
131D	THE LOW-TEMPERATURE CRYSTAL STRUCTURE OF THE PURE-SPERMINE FORM OF Z-DNA REVEALS BINDING OF A SPERMINE MOLECULE IN THE MINOR GROOVE Descriptor: DNA (5'-D(*CP*GP*CP*GP*CP*G)-3'), SODIUM ION, SPERMINE Authors: Bancroft, D, Williams, L.D, Rich, A, Egli, M. Deposit date: 1993-06-18 Release date: 1993-10-15 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1 Å) Cite: The low-temperature crystal structure of the pure-spermine form of Z-DNA reveals binding of a spermine molecule in the minor groove. Biochemistry, 33, 1994
13PK	TERNARY COMPLEX OF PHOSPHOGLYCERATE KINASE FROM TRYPANOSOMA BRUCEI Descriptor: 3-PHOSPHOGLYCERATE KINASE, 3-PHOSPHOGLYCERIC ACID, ADENOSINE-5'-DIPHOSPHATE, ... Authors: Bernstein, B.E, Michels, P.A.M, Hol, W.G.J. Deposit date: 1996-11-23 Release date: 1997-12-24 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Synergistic effects of substrate-induced conformational changes in phosphoglycerate kinase activation. Nature, 385, 1997
145D	Structure and thermodynamics of nonalternating C/G base pairs in Z-DNA: the 1.3 angstroms crystal structure of the asymmetric hexanucleotide D(M(5)CGGGM(5) CG)/D(M(5)CGCCM(5)CG) Descriptor: DNA (5'-D(*(5CM)P*DGP*DGP*DGP*(5CM)P*DG)-3'), DNA (5'-D(*(MCY)P*GP*CP*CP*(5CM)P*G)-3'), DNA (5'-D(*(MCY)P*GP*GP*GP*(5CM)P*G)-3') Authors: Schroth, G.P, Kagawa, T.F, Shing Ho, P. Deposit date: 1993-11-11 Release date: 1994-01-15 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.25 Å) Cite: Structure and thermodynamics of nonalternating C.G base pairs in Z-DNA: the 1.3-A crystal structure of the asymmetric hexanucleotide d(m5CGGGm5CG).d(m5CGCCm5CG). Biochemistry, 32, 1993
148L	A COVALENT ENZYME-SUBSTRATE INTERMEDIATE WITH SACCHARIDE DISTORTION IN A MUTANT T4 LYSOZYME Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-alpha-muramic acid, BETA-MERCAPTOETHANOL, SUBSTRATE CLEAVED FROM CELL WALL OF ESCHERICHIA COLI, ... Authors: Kuroki, R, Weaver, L.H, Matthews, B.W. Deposit date: 1993-10-27 Release date: 1994-04-30 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.9 Å) Cite: A covalent enzyme-substrate intermediate with saccharide distortion in a mutant T4 lysozyme. Science, 262, 1993
149L	CONSERVATION OF SOLVENT-BINDING SITES IN 10 CRYSTAL FORMS OF T4 LYSOZYME Descriptor: T4 LYSOZYME Authors: Wilson, K, Matthews, B.W. Deposit date: 1994-01-25 Release date: 1994-04-30 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Conservation of solvent-binding sites in 10 crystal forms of T4 lysozyme. Protein Sci., 3, 1994
150L	CONSERVATION OF SOLVENT-BINDING SITES IN 10 CRYSTAL FORMS OF T4 LYSOZYME Descriptor: T4 LYSOZYME Authors: Faber, H.R, Matthews, B.W. Deposit date: 1994-01-25 Release date: 1994-04-30 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Conservation of solvent-binding sites in 10 crystal forms of T4 lysozyme. Protein Sci., 3, 1994
151L	CONSERVATION OF SOLVENT-BINDING SITES IN 10 CRYSTAL FORMS OF T4 LYSOZYME Descriptor: PHOSPHATE ION, T4 LYSOZYME Authors: Zhang, X.-J, Matthews, B.W. Deposit date: 1994-01-25 Release date: 1994-04-30 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Conservation of solvent-binding sites in 10 crystal forms of T4 lysozyme. Protein Sci., 3, 1994
152L	CONSERVATION OF SOLVENT-BINDING SITES IN 10 CRYSTAL FORMS OF T4 LYSOZYME Descriptor: SULFATE ION, T4 LYSOZYME Authors: Matsumura, M, Weaver, L.H, Matthews, B.W. Deposit date: 1994-01-26 Release date: 1994-05-31 Last modified: 2020-07-22 Method: X-RAY DIFFRACTION (2 Å) Cite: Conservation of solvent-binding sites in 10 crystal forms of T4 lysozyme. Protein Sci., 3, 1994
154D	DNA DISTORTION IN BIS-INTERCALATED COMPLEXES Descriptor: BIS-(N-ETHYLPYRIDINIUM-(3-METHOXYCARBAZOLE))HEXANE-1,6-DIAMINE, DNA (5'-D(*(CBR)P*GP*CP*G)-3') Authors: Peek, M.E, Lipscomb, L.A, Bertrand, J.A, Gao, Q, Roques, B.P, Garbay-Jaureguiberry, C, Williams, L.D. Deposit date: 1993-12-14 Release date: 1994-08-31 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.5 Å) Cite: DNA distortion in bis-intercalated complexes. Biochemistry, 33, 1994
157D	CRYSTAL AND MOLECULAR STRUCTURE OF R(CGCGAAUUAGCG): AN RNA DUPLEX CONTAINING TWO G(ANTI).A(ANTI) BASE-PAIRS Descriptor: RNA (5'-R(*CP*GP*CP*GP*AP*AP*UP*UP*AP*GP*CP*G)-3') Authors: Leonard, G.A, McAuley-Hecht, K.E, Ebel, S, Lough, D.M, Brown, T, Hunter, W.N. Deposit date: 1994-02-01 Release date: 1994-05-31 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Crystal and molecular structure of r(CGCGAAUUAGCG): an RNA duplex containing two G(anti).A(anti) base pairs. Structure, 2, 1994
159D	SIDE BY SIDE BINDING OF TWO DISTAMYCIN A DRUGS IN THE MINOR GROOVE OF AN ALTERNATING B-DNA DUPLEX Descriptor: DISTAMYCIN A, DNA (5'-D(*IP*CP*IP*CP*IP*CP*IP*C)-3'), MAGNESIUM ION Authors: Chen, X, Ramakrishnan, B, Rao, S.T, Sundaralingam, M. Deposit date: 1994-02-10 Release date: 1995-02-07 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Binding of two distamycin A molecules in the minor groove of an alternating B-DNA duplex. Nat.Struct.Biol., 1, 1994

 

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