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3PSM
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.98A crystal structure of a dimeric plant defensin SPE10
Descriptor: Defensin
Authors:Zhou, H, Song, X, Gong, W.
Deposit date:2010-12-01
Release date:2010-12-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:0.98A crystal structure of a dimeric plant defensin SPE10
To be Published
7C31
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BU of 7c31 by Molmil
Crystal structure of the grapevine defensin VvK1
Descriptor: Knot1 domain-containing protein
Authors:Chen, M.W, Chang, S.C, Chandy, K.G, Luo, D.
Deposit date:2020-05-10
Release date:2020-09-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Modulation of Lymphocyte Potassium Channel KV1.3 by Membrane-Penetrating, Joint-Targeting Immunomodulatory Plant Defensin.
Acs Pharmacol Transl Sci, 3, 2020
4AAZ
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BU of 4aaz by Molmil
X-ray structure of Nicotiana alata Defensin 1 NaD1
Descriptor: 1,2-ETHANEDIOL, FLOWER-SPECIFIC DEFENSIN, PHOSPHATE ION
Authors:Lay, F.T, Mills, G.D, Hulett, M.D, Kvansakul, M.
Deposit date:2011-12-06
Release date:2012-04-25
Last modified:2012-08-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Dimerization of Plant Defensin Nad1 Enhances its Antifungal Activity.
J.Biol.Chem., 287, 2012
4CQK
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Crystal structure of ligand-bound NaD1
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, FLOWER-SPECIFIC DEFENSIN, SULFATE ION, ...
Authors:Lay, F.T, Mills, G.M, Poon, I.K.H, Baxter, A.A, Hulett, M.D, Kvansakul, M.
Deposit date:2014-02-17
Release date:2014-04-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Phosphoinositide-Mediated Oligomerization of a Defensin Induces Cell Lysis.
Elife, 3, 2014
6LCQ
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Crystal structure of rice defensin OsAFP1
Descriptor: Defensin-like protein CAL1, PHOSPHATE ION
Authors:Ochiai, A, Ogawa, K, Fukuda, M, Suzuki, M, Ito, K, Tanaka, T, Sagehashi, Y, Taniguchi, M.
Deposit date:2019-11-19
Release date:2020-04-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Crystal structure of rice defensin OsAFP1 and molecular insight into lipid-binding.
J.Biosci.Bioeng., 130, 2020
4AB0
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X-ray crystal structure of Nicotiana alata defensin NaD1
Descriptor: FLOWER-SPECIFIC DEFENSIN, PHOSPHATE ION
Authors:Mills, G.D, Lay, F.T, Hulett, M.D, Kvansakul, M.
Deposit date:2011-12-06
Release date:2012-04-25
Last modified:2012-06-20
Method:X-RAY DIFFRACTION (1.636 Å)
Cite:Dimerization of Plant Defensin Nad1 Enhances its Antifungal Activity.
J.Biol.Chem., 287, 2012
5KK4
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Crystal Structure of the Plant Defensin NsD7 bound to Phosphatidic Acid
Descriptor: (2R)-3-(phosphonooxy)propane-1,2-diyl dihexanoate, 1,2-ETHANEDIOL, ACETATE ION, ...
Authors:Kvansakul, M, Hulett, M.D, Lay, F.T.
Deposit date:2016-06-21
Release date:2016-10-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Binding of phosphatidic acid by NsD7 mediates the formation of helical defensin-lipid oligomeric assemblies and membrane permeabilization.
Proc.Natl.Acad.Sci.USA, 113, 2016
4UJ0
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Crystal structure of the tomato defensin TPP3
Descriptor: ACETATE ION, FLOWER-SPECIFIC GAMMA-THIONIN-LIKE PROTEIN/ACIDIC PROTEIN
Authors:Richter, V, Lay, F.T, Hulett, M.D, Kvansakul, M.
Deposit date:2015-04-07
Release date:2015-04-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Tomato Defensin Tpp3 Binds Phosphatidylinositol (4,5)-Bisphosphate Via a Conserved Dimeric Cationic Grip Conformation to Mediate Cell Lysis.
Mol.Cell.Biol., 35, 2015
6MRY
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BU of 6mry by Molmil
NoD173 plant defensin
Descriptor: 1,2-ETHANEDIOL, 5-amino-2,4,6-triiodobenzene-1,3-dicarboxylic acid, CHLORIDE ION, ...
Authors:Caria, S, Kvansakul, M.
Deposit date:2018-10-15
Release date:2019-04-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and functional characterization of the membrane-permeabilizing activity ofNicotiana occidentalisdefensin NoD173 and protein engineering to enhance oncolysis.
Faseb J., 33, 2019
6B55
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BU of 6b55 by Molmil
Crystal structure of the Plant Defensin NaD1 complexed with phosphatidic acid
Descriptor: 1,2-DIOCTANOYL-SN-GLYCERO-3-PHOSPHATE, 1,2-ETHANEDIOL, Flower-specific defensin, ...
Authors:Jarva, M, Phan, K, Humble, C, Lay, F.T, Hulett, M, Kvansakul, M.
Deposit date:2017-09-28
Release date:2018-05-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:X-ray structure of a carpet-like antimicrobial defensin-phospholipid membrane disruption complex.
Nat Commun, 9, 2018
5VYP
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BU of 5vyp by Molmil
Crystal structure of the Plant Defensin NsD7 bound to PIP2
Descriptor: Defensin NsD7, GLYCEROL, SULFATE ION, ...
Authors:Jarva, M, Lay, F.T, Hulett, M, Kvansakul, M.
Deposit date:2017-05-25
Release date:2017-08-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of the defensin NsD7 in complex with PIP2 reveals that defensin : lipid oligomer topologies are dependent on lipid type.
FEBS Lett., 591, 2017
2LJ7
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3D solution structure of plant defensin Lc-def
Descriptor: Defensin Lc-def
Authors:Shenkarev, Z, Mineev, K, Gizatullina, A.
Deposit date:2011-09-07
Release date:2012-09-12
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Heterologous expression and solution structure of defensin from lentil Lens culinaris.
Biochem.Biophys.Res.Commun., 451, 2014
2KSK
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BU of 2ksk by Molmil
Solution Structure of Sugarcane defensin 5
Descriptor: Sugarcane defensin 5
Authors:de Paula, V.S, Almeida, F.C.L, Valente, A.
Deposit date:2010-01-06
Release date:2011-01-26
Last modified:2012-11-21
Method:SOLUTION NMR
Cite:Portrayal of Complex Dynamic Properties of Sugarcane Defensin 5 by NMR: Multiple Motions Associated with Membrane Interaction.
Structure, 19, 2011
2LR3
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BU of 2lr3 by Molmil
Solution structure of the anti-fungal defensin DEF4 (MTR_8g070770) from Medicago truncatula (barrel clover)
Descriptor: Defensin
Authors:Buchko, G.W, Smith, T.J, Shah, D.M.
Deposit date:2012-03-21
Release date:2012-09-26
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural and Functional Studies of a Phosphatidic Acid-Binding Antifungal Plant Defensin MtDef4: Identification of an RGFRRR Motif Governing Fungal Cell Entry.
Plos One, 8, 2013
6VPN
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BU of 6vpn by Molmil
Solution structure of antifungal plant defensin PvD1
Descriptor: Knot1 domain-containing protein
Authors:Harvey, P.J.
Deposit date:2020-02-03
Release date:2020-08-26
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Synthesis, Structure, and Activity of the Antifungal Plant DefensinPvD1.
J.Med.Chem., 63, 2020
2KPY
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BU of 2kpy by Molmil
Solution Structure of the major allergen of Artemisia vulgaris (Art v 1)
Descriptor: Major pollen allergen Art v 1
Authors:Razzera, G, Gadermaier, G, Almeida, M, Egger, M, Jahn-Schmid, B, Almeida, F, Ferreira, F, Valente, A.
Deposit date:2009-10-23
Release date:2010-10-06
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Mapping the interactions between a major pollen allergen and human IgE antibodies.
Structure, 18, 2010
6DMZ
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BU of 6dmz by Molmil
Solution structure of ZmD32
Descriptor: Flower-specific gamma-thionin
Authors:Harvey, P.J, Craik, D.J.
Deposit date:2018-06-05
Release date:2019-05-15
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Salt-Tolerant Antifungal and Antibacterial Activities of the Corn Defensin ZmD32.
Front Microbiol, 10, 2019
8GXT
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BU of 8gxt by Molmil
Antibacterial peptide, mehamycin
Descriptor: Antibacterial peptide
Authors:Isozumi, N, Ohki, S.
Deposit date:2022-09-21
Release date:2023-09-27
Method:SOLUTION NMR
Cite:Antibacterial peptide, mehamycin
To Be Published
1AYJ
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BU of 1ayj by Molmil
DETERMINATION OF THE THREE-DIMENSIONAL SOLUTION STRUCTURE OF RAPHANUS SATIVUS ANTIFUNGAL PROTEIN 1 (RS-AFP1) BY 1H NMR, 20 STRUCTURES
Descriptor: ANTIFUNGAL PROTEIN 1
Authors:Fant, F, Borremans, F.A.M.
Deposit date:1997-11-05
Release date:1998-01-28
Last modified:2019-12-25
Method:SOLUTION NMR
Cite:Determination of the three-dimensional solution structure of Raphanus sativus antifungal protein 1 by 1H NMR.
J.Mol.Biol., 279, 1998
6NOM
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BU of 6nom by Molmil
NMR solution structure of Pisum sativum defensin 2 (Psd2) provides evidence for the presence of hydrophobic surface clusters
Descriptor: Defensin-2
Authors:Pinheiro-Aguiar, R, Amaral, V.S.G, Bastos, I, Kurtenbach, E, Almeida, F.C.L.
Deposit date:2019-01-16
Release date:2019-08-21
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Nuclear magnetic resonance solution structure of Pisum sativum defensin 2 provides evidence for the presence of hydrophobic surface-clusters.
Proteins, 88, 2020
2M8B
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BU of 2m8b by Molmil
Solution structure of AhPDF1 from Arabidopsis halleri
Descriptor: plant defensin PDF1.1
Authors:Meindre, F, Paquet, F, Landon, C.
Deposit date:2013-05-13
Release date:2014-05-14
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:The nuclear magnetic resonance solution structure of the synthetic AhPDF1.1b plant defensin evidences the structural feature within the gamma-motif.
Biochemistry, 53, 2014
1N4N
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BU of 1n4n by Molmil
Structure of the Plant Defensin PhD1 from Petunia Hybrida
Descriptor: floral defensin-like protein 1
Authors:Janssen, B.J.C, Schirra, H.J, Lay, F.T, Anderson, M.A, Craik, D.J.
Deposit date:2002-11-01
Release date:2003-11-01
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Structure of Petunia hybrida defensin 1, a novel plant defensin with five disulfide bonds
Biochemistry, 42, 2003
2N2R
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BU of 2n2r by Molmil
NMR solution structure of RsAFP2
Descriptor: Defensin-like protein 2
Authors:Harvey, P.J, Craik, D.J, Vriens, K.
Deposit date:2015-05-12
Release date:2016-05-25
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:The radish defensins RsAFP1 and RsAFP2 act synergistically with caspofungin against Candida albicans biofilms.
Peptides, 75, 2016
1BK8
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BU of 1bk8 by Molmil
DETERMINATION OF THE THREE-DIMENSIONAL SOLUTION STRUCTURE OF AESCULUS HIPPOCASTANUM ANTIMICROBIAL PROTEIN 1 (AH-AMP1) BY 1H NMR, 25 STRUCTURES
Descriptor: ANTIMICROBIAL PROTEIN 1
Authors:Fant, F, Borremans, F.A.M.
Deposit date:1998-07-15
Release date:2000-01-05
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:The three-dimensional solution structure of Aesculus hippocastanum antimicrobial protein 1 determined by 1H nuclear magnetic resonance.
Proteins, 37, 1999
1JKZ
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BU of 1jkz by Molmil
NMR Solution Structure of Pisum sativum defensin 1 (Psd1)
Descriptor: DEFENSE-RELATED PEPTIDE 1
Authors:Almeida, M.S, Cabral, K.M.S, Kurtenbach, E, Almeida, F.C.L, Valente, A.P.
Deposit date:2001-07-13
Release date:2002-02-06
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution structure of Pisum sativum defensin 1 by high resolution NMR: plant defensins, identical backbone with different mechanisms of action.
J.Mol.Biol., 315, 2002

 

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