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5VHE
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BU of 5vhe by Molmil
DHX36 in complex with the c-Myc G-quadruplex
Descriptor: DEAH (Asp-Glu-Ala-His) box polypeptide 36, DNA (5'-D(*AP*GP*GP*GP*TP*GP*GP*GP*TP*AP*GP*GP*GP*TP*GP*GP*GP*TP*TP*TP*TP*TP*TP*T)-3'), POTASSIUM ION
Authors:Chen, M, Ferre-D'Amare, A.
Deposit date:2017-04-13
Release date:2018-06-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.793 Å)
Cite:Structural basis of G-quadruplex unfolding by the DEAH/RHA helicase DHX36.
Nature, 558, 2018
2Z0M
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BU of 2z0m by Molmil
Crystal structure of hypothetical ATP-dependent RNA helicase from Sulfolobus tokodaii
Descriptor: 337aa long hypothetical ATP-dependent RNA helicase deaD
Authors:Nakagawa, N, Kusano, S, Shirouzu, M, Chen, L, Fu, Z.-Q, Chrzas, J, Wang, B.-C, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-07
Release date:2007-11-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of hypothetical ATP-dependent RNA helicase from Sulfolobus tokodaii
To be Published
6X2N
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BU of 6x2n by Molmil
Mfd-bound E.coli RNA polymerase elongation complex - I state
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA (64-MER), DNA-directed RNA polymerase subunit alpha, ...
Authors:Llewellyn, E, Chen, J, Kang, J.Y, Darst, S.A.
Deposit date:2020-05-20
Release date:2021-02-03
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural basis for transcription complex disruption by the Mfd translocase.
Elife, 10, 2021
6X4W
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BU of 6x4w by Molmil
Mfd-bound E.coli RNA polymerase elongation complex - III state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA (64-MER), DNA-directed RNA polymerase subunit alpha, ...
Authors:Llewellyn, E, Chen, J, Kang, J.Y, Darst, S.A.
Deposit date:2020-05-24
Release date:2021-02-03
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural basis for transcription complex disruption by the Mfd translocase.
Elife, 10, 2021
2ZJA
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BU of 2zja by Molmil
Archaeal DNA helicase Hjm complexed with AMPPCP in form 2
Descriptor: PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, Putative ski2-type helicase
Authors:Oyama, T, Oka, H, Fujikane, R, Ishino, Y, Morikawa, K.
Deposit date:2008-02-29
Release date:2009-02-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Atomic structures and functional implications of the archaeal RecQ-like helicase Hjm
Bmc Struct.Biol., 9, 2009
6X4Y
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BU of 6x4y by Molmil
Mfd-bound E.coli RNA polymerase elongation complex - IV state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA (64-MER), DNA-directed RNA polymerase subunit alpha, ...
Authors:Llewellyn, E, Chen, J, Kang, J.Y, Darst, S.A.
Deposit date:2020-05-24
Release date:2021-02-03
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural basis for transcription complex disruption by the Mfd translocase.
Elife, 10, 2021
6X26
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BU of 6x26 by Molmil
Mfd-bound E.coli RNA polymerase elongation complex - L1 state
Descriptor: DNA (64-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Llewellyn, E, Chen, J, Kang, J.Y, Darst, S.A.
Deposit date:2020-05-20
Release date:2021-02-03
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structural basis for transcription complex disruption by the Mfd translocase.
Elife, 10, 2021
6X50
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BU of 6x50 by Molmil
Mfd-bound E.coli RNA polymerase elongation complex - V state
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA (64-MER), DNA-directed RNA polymerase subunit alpha, ...
Authors:Llewelyn, E, Chen, J, Kang, J.Y, Darst, S.A.
Deposit date:2020-05-24
Release date:2021-02-03
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis for transcription complex disruption by the Mfd translocase.
Elife, 10, 2021
6X43
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BU of 6x43 by Molmil
Mfd-bound E.coli RNA polymerase elongation complex - II state
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA (64-MER), DNA-directed RNA polymerase subunit alpha, ...
Authors:Llewellyn, E, Chen, J, Kang, J.Y, Darst, S.A.
Deposit date:2020-05-22
Release date:2021-02-03
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural basis for transcription complex disruption by the Mfd translocase.
Elife, 10, 2021
2ZJ2
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BU of 2zj2 by Molmil
Archaeal DNA helicase Hjm apo state in form 1
Descriptor: Putative ski2-type helicase, SULFATE ION
Authors:Oyama, T, Oka, H, Fujikane, R, Ishino, Y, Morikawa, K.
Deposit date:2008-02-29
Release date:2009-02-10
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Atomic structures and functional implications of the archaeal RecQ-like helicase Hjm
Bmc Struct.Biol., 9, 2009
2ZJ8
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BU of 2zj8 by Molmil
Archaeal DNA helicase Hjm apo state in form 2
Descriptor: Putative ski2-type helicase
Authors:Oyama, T, Oka, H, Fujikane, R, Ishino, Y, Morikawa, K.
Deposit date:2008-02-29
Release date:2009-02-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Atomic structures and functional implications of the archaeal RecQ-like helicase Hjm
Bmc Struct.Biol., 9, 2009
6XEO
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BU of 6xeo by Molmil
Structure of Mfd bound to dsDNA
Descriptor: DNA (5'-D(P*AP*GP*GP*AP*TP*AP*CP*TP*TP*AP*CP*AP*GP*CP*CP*AP*TP*C)-3'), DNA (5'-D(P*GP*AP*TP*GP*GP*CP*TP*GP*TP*AP*AP*GP*TP*AP*TP*CP*CP*T)-3'), Transcription-repair-coupling factor
Authors:Brugger, C, Deaconescu, A.
Deposit date:2020-06-12
Release date:2020-08-19
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (5.5 Å)
Cite:Molecular determinants for dsDNA translocation by the transcription-repair coupling and evolvability factor Mfd.
Nat Commun, 11, 2020
6X2F
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BU of 6x2f by Molmil
Mfd-bound E.coli RNA polymerase elongation complex - L2 state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA (64-MER), DNA-directed RNA polymerase subunit alpha, ...
Authors:Llewellyn, E, Chen, J, Kang, J.Y, Darst, S.A.
Deposit date:2020-05-20
Release date:2021-02-03
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural basis for transcription complex disruption by the Mfd translocase.
Elife, 10, 2021
6XKI
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BU of 6xki by Molmil
Crystal structure of eIF4A-I in complex with RNA bound to des-MePateA, a pateamine A analog
Descriptor: (3S,6Z,8E,11S,15R)-15-amino-3-[(1E,3E,5E)-7-(dimethylamino)-2,5-dimethylhepta-1,3,5-trien-1-yl]-9,11-dimethyl-4,12-dioxa-20-thia-21-azabicyclo[16.2.1]henicosa-1(21),6,8,18-tetraene-5,13-dione, Eukaryotic initiation factor 4A-I, MAGNESIUM ION, ...
Authors:Liang, J, Naineni, S.K, Pelletier, J, Nagar, B.
Deposit date:2020-06-26
Release date:2021-01-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.87 Å)
Cite:Functional mimicry revealed by the crystal structure of an eIF4A:RNA complex bound to the interfacial inhibitor, desmethyl pateamine A.
Cell Chem Biol, 28, 2021
2ZJ5
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BU of 2zj5 by Molmil
Archaeal DNA helicase Hjm complexed with ADP in form 1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Putative ski2-type helicase, SULFATE ION
Authors:Oyama, T, Oka, H, Fujikane, R, Ishino, Y, Morikawa, K.
Deposit date:2008-02-29
Release date:2009-02-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Atomic structures and functional implications of the archaeal RecQ-like helicase Hjm
Bmc Struct.Biol., 9, 2009
2ZU6
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BU of 2zu6 by Molmil
crystal structure of the eIF4A-PDCD4 complex
Descriptor: 1,2-ETHANEDIOL, ACETIC ACID, Eukaryotic initiation factor 4A-I, ...
Authors:Cho, Y, Chang, J.H, Sohn, S.Y.
Deposit date:2008-10-13
Release date:2009-02-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the eIF4A-PDCD4 complex
Proc.Natl.Acad.Sci.Usa, 106, 2009
2YKG
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BU of 2ykg by Molmil
Structural insights into RNA recognition by RIG-I
Descriptor: 5'-R(*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP)-3', PROBABLE ATP-DEPENDENT RNA HELICASE DDX58, SULFATE ION, ...
Authors:Luo, D, Pyle, A.M.
Deposit date:2011-05-27
Release date:2011-10-26
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Insights Into RNA Recognition by Rig-I.
Cell(Cambridge,Mass.), 147, 2011
6SH7
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BU of 6sh7 by Molmil
Crystal structure of the human DEAH-helicase DHX15 in complex with the NKRF G-patch
Descriptor: NF-kappa-B-repressing factor, Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
Authors:Jonas, S, Studer, M.K, Ivanovic, L.
Deposit date:2019-08-05
Release date:2020-04-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Structural basis for DEAH-helicase activation by G-patch proteins.
Proc.Natl.Acad.Sci.USA, 117, 2020
6FA5
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BU of 6fa5 by Molmil
CRYSTAL STRUCTURE OF THE DEAH-BOX HELICASE PRP2 IN COMPLEX WITH ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, ...
Authors:Hamann, F, Schmitt, A, Neumann, P, Ficner, R.
Deposit date:2017-12-15
Release date:2018-07-11
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.303 Å)
Cite:Crystal structure of the spliceosomal DEAH-box ATPase Prp2.
Acta Crystallogr D Struct Biol, 74, 2018
6FAA
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BU of 6faa by Molmil
CRYSTAL STRUCTURE OF THE DEAH-BOX HELICASE PRP2 IN COMPLEX WITH ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ETHANOL, GLYCEROL, ...
Authors:Schmitt, A, Hamann, F, Neumann, P, Ficner, R.
Deposit date:2017-12-15
Release date:2018-07-11
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Crystal structure of the spliceosomal DEAH-box ATPase Prp2.
Acta Crystallogr D Struct Biol, 74, 2018
4Q48
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BU of 4q48 by Molmil
Structure of the RecQ Catalytic Core from Deinococcus radiodurans
Descriptor: DNA helicase RecQ, ZINC ION
Authors:Chen, S.C, Yang, C.S, Chen, Y.
Deposit date:2014-04-14
Release date:2015-05-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.797 Å)
Cite:Crystal structure of Deinococcus radiodurans RecQ helicase catalytic core domain: the interdomain flexibility.
Biomed Res Int, 2014, 2014
6SH6
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BU of 6sh6 by Molmil
Crystal structure of the human DEAH-helicase DHX15 in complex with the NKRF G-patch bound to ADP
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Jonas, S, Studer, M.K, Ivanovic, L.
Deposit date:2019-08-05
Release date:2020-04-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural basis for DEAH-helicase activation by G-patch proteins.
Proc.Natl.Acad.Sci.USA, 117, 2020
3EIQ
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BU of 3eiq by Molmil
Crystal structure of Pdcd4-eIF4A
Descriptor: Eukaryotic initiation factor 4A-I, Programmed cell death protein 4
Authors:Loh, P.G, Cheng, Z, Song, H.
Deposit date:2008-09-17
Release date:2009-02-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structural basis for translational inhibition by the tumour suppressor Pdcd4
Embo J., 28, 2009
7SSG
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BU of 7ssg by Molmil
Mfd DNA complex
Descriptor: DNA (5'-D(P*TP*GP*GP*CP*GP*GP*CP*GP*AP*GP*GP*C)-3'), DNA (5'-D(P*TP*TP*GP*CP*CP*TP*CP*GP*CP*TP*GP*CP*CP*A)-3'), Transcription-repair-coupling factor
Authors:Oakley, A.J, Xu, Z.-Q.
Deposit date:2021-11-11
Release date:2022-05-25
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (5.2 Å)
Cite:Mechanism of transcription modulation by the transcription-repair coupling factor.
Nucleic Acids Res., 50, 2022
6FWS
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BU of 6fws by Molmil
Structure of DinG in complex with ssDNA and ADPBeF
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent DNA helicase DinG, BERYLLIUM TRIFLUORIDE ION, ...
Authors:Cheng, K, Wigley, D.
Deposit date:2018-03-07
Release date:2018-12-19
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:DNA translocation mechanism of an XPD family helicase.
Elife, 7, 2018

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PDB entries from 2024-09-18

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