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2DD9
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BU of 2dd9 by Molmil
A mutant of GFP-like protein from Chiridius poppei
Descriptor: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, CHLORIDE ION, green fluorescent protein
Authors:Suto, K, Masuda, H, Takenaka, Y, Mizuno, H.
Deposit date:2006-01-24
Release date:2007-01-23
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for red-shifted emission of a GFP-like protein from the marine copepod Chiridius poppei
Genes Cells, 14, 2009
2AH8
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BU of 2ah8 by Molmil
roGFP1-R7. Cystal structure analysis of a rate-enhanced variant of redox-sensitive green fluorescent protein in the oxidized form.
Descriptor: Green fluorescent protein, IMIDAZOLE
Authors:Cannon, M.B, Remington, S.J.
Deposit date:2005-07-27
Release date:2006-03-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Re-engineering redox-sensitive green fluorescent protein for improved response rate.
Protein Sci., 15, 2006
2AWM
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BU of 2awm by Molmil
GFP R96A chromophore maturation recovery mutant R96A Q183R
Descriptor: MAGNESIUM ION, green fluorescent protein
Authors:Wood, T.I, Barondeau, D.P, Hitomi, C, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2005-09-01
Release date:2006-04-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Defining the role of arginine 96 in green fluorescent protein fluorophore biosynthesis.
Biochemistry, 44, 2005
2AWK
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BU of 2awk by Molmil
GFP R96M mature chromophore
Descriptor: MAGNESIUM ION, green fluorescent protein
Authors:Wood, T.I, Barondeau, D.P, Hitomi, C, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2005-09-01
Release date:2006-04-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Defining the role of arginine 96 in green fluorescent protein fluorophore biosynthesis.
Biochemistry, 44, 2005
2AWJ
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BU of 2awj by Molmil
GFP R96M pre-cyclized intermediate in chromophore formation
Descriptor: MAGNESIUM ION, green-fluorescent protein
Authors:Wood, T.I, Barondeau, D.P, Hitomi, C, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2005-09-01
Release date:2006-04-18
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Defining the role of arginine 96 in green fluorescent protein fluorophore biosynthesis.
Biochemistry, 44, 2005
2DD7
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BU of 2dd7 by Molmil
A GFP-like protein from marine copepod, Chiridius poppei
Descriptor: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, CHLORIDE ION, green fluorescent protein
Authors:Suto, K, Masuda, H, Takenaka, Y, Mizuno, H.
Deposit date:2006-01-23
Release date:2007-01-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for red-shifted emission of a GFP-like protein from the marine copepod Chiridius poppei
Genes Cells, 14, 2009
2G3O
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BU of 2g3o by Molmil
The 2.1A crystal structure of copGFP
Descriptor: green fluorescent protein 2
Authors:Wilmann, P.G.
Deposit date:2006-02-20
Release date:2006-08-15
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The 2.1A crystal structure of copGFP, a representative member of the copepod clade within the green fluorescent protein superfamily
J.Mol.Biol., 359, 2006
5Y01
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BU of 5y01 by Molmil
Acid-tolerant monomeric GFP, Gamillus, non-fluorescence (OFF) state
Descriptor: Green fluorescent protein, PHOSPHATE ION
Authors:Nakashima, R, Sakurai, K, Shinoda, H, Matsuda, T, Nagai, T.
Deposit date:2017-07-14
Release date:2018-01-17
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Acid-Tolerant Monomeric GFP from Olindias formosa.
Cell Chem Biol, 25, 2018
5Y00
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BU of 5y00 by Molmil
Acid-tolerant monomeric GFP, Gamillus, fluorescence (ON) state
Descriptor: CHLORIDE ION, GLYCEROL, Green fluorescent protein, ...
Authors:Nakashima, R, Sakurai, K, Shinoda, H, Matsuda, T, Nagai, T.
Deposit date:2017-07-14
Release date:2018-01-17
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Acid-Tolerant Monomeric GFP from Olindias formosa.
Cell Chem Biol, 25, 2018
6UN7
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BU of 6un7 by Molmil
Crystal structure of green fluorescent protein (GFP); S65T, Y66(3-OMeY); ih circular permutant (50-51)
Descriptor: Green fluorescent protein
Authors:Lin, C.-Y, Boxer, S.G.
Deposit date:2019-10-10
Release date:2020-10-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Unusual Spectroscopic and Electric Field Sensitivity of Chromophores with Short Hydrogen Bonds: GFP and PYP as Model Systems.
J.Phys.Chem.B, 124, 2020
6UN5
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BU of 6un5 by Molmil
Crystal structure of green fluorescent protein (GFP); S65T, Y66(2,3,5-F3Y); ih circular permutant (50-51)
Descriptor: Green fluorescent protein,Green fluorescent protein
Authors:Lin, C.-Y, Boxer, S.G.
Deposit date:2019-10-10
Release date:2020-10-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Unusual Spectroscopic and Electric Field Sensitivity of Chromophores with Short Hydrogen Bonds: GFP and PYP as Model Systems.
J.Phys.Chem.B, 124, 2020
6UN6
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BU of 6un6 by Molmil
Crystal structure of green fluorescent protein (GFP); S65T, Y66(3-NO2Y); ih circular permutant (50-51)
Descriptor: Green fluorescent protein
Authors:Lin, C.-Y, Boxer, S.G.
Deposit date:2019-10-10
Release date:2020-10-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Unusual Spectroscopic and Electric Field Sensitivity of Chromophores with Short Hydrogen Bonds: GFP and PYP as Model Systems.
J.Phys.Chem.B, 124, 2020
5MSE
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BU of 5mse by Molmil
GFP nuclear transport receptor mimic 3B8
Descriptor: Green fluorescent protein, IMIDAZOLE, SODIUM ION
Authors:Huyton, T, Gorlich, D.
Deposit date:2017-01-04
Release date:2018-05-02
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Surface Properties Determining Passage Rates of Proteins through Nuclear Pores.
Cell, 174, 2018
7V0V
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BU of 7v0v by Molmil
GFP Nanobody NMR Structure
Descriptor: Anti-GFP Nanobody
Authors:Mueller, G.A.
Deposit date:2022-05-11
Release date:2022-06-08
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Nanobody Paratope Ensembles in Solution Characterized by MD Simulations and NMR.
Int J Mol Sci, 23, 2022
5DY6
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BU of 5dy6 by Molmil
Enhanced superfolder GFP with DBCO at 148
Descriptor: Green fluorescent protein, SULFATE ION
Authors:Jones, D.D, Rizkallah, P.J, Worthy, H.L.
Deposit date:2015-09-24
Release date:2016-07-13
Last modified:2018-05-30
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Molecular basis for functional switching of GFP by two disparate non-native post-translational modifications of a phenyl azide reaction handle.
Chem Sci, 7, 2016
1XQM
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BU of 1xqm by Molmil
Variations on the GFP chromophore scaffold: A fragmented 5-membered heterocycle revealed in the 2.1A crystal structure of a non-fluorescent chromoprotein
Descriptor: ACETIC ACID, kindling fluorescent protein
Authors:Wilmann, P.G, Petersen, J, Devenish, R.J, Prescott, M, Rossjohn, J.
Deposit date:2004-10-13
Release date:2004-11-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Variations on the GFP chromophore: A polypeptide fragmentation within the chromophore revealed in the 2.1-A crystal structure of a nonfluorescent chromoprotein from Anemonia sulcata
J.Biol.Chem., 280, 2005
4DXQ
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BU of 4dxq by Molmil
Crystal Structure of a reconstructed Kaede-type Red Fluorescent Protein, LEA Q38A
Descriptor: LEA Q38A GFP-LIKE PROTEINS
Authors:Kim, H, Wachter, R.M.
Deposit date:2012-02-27
Release date:2013-02-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Acid-Base Catalysis and Crystal Structures of a Least Evolved Ancestral GFP-like Protein Undergoing Green-to-Red Photoconversion.
Biochemistry, 52, 2013
4DXN
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BU of 4dxn by Molmil
Crystal Structure of a reconstructed Kaede-type Red Fluorescent Protein, Least Evolved Ancestor (LEA)
Descriptor: LEAST EVOLVED ANCESTOR (LEA) GFP-LIKE PROTEINS, SULFATE ION
Authors:Kim, H, Fromme, R, Wachter, R.M.
Deposit date:2012-02-27
Release date:2013-02-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Acid-Base Catalysis and Crystal Structures of a Least Evolved Ancestral GFP-like Protein Undergoing Green-to-Red Photoconversion.
Biochemistry, 52, 2013
4DXM
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BU of 4dxm by Molmil
Crystal Structure of an ancestral GFP-like protein
Descriptor: GREEN FLUORESCENT PROTEIN, SULFATE ION
Authors:Kim, H, Fromme, R, Wachter, R.M.
Deposit date:2012-02-27
Release date:2013-02-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:A hinge migration mechanism unlocks the evolution of green-to-red photoconversion in GFP-like proteins.
Structure, 23, 2015
4DXP
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BU of 4dxp by Molmil
Crystal Structure of a reconstructed Kaede-type Red Fluorescent Protein, LEA X121
Descriptor: LEA X121 GFP-LIKE PROTEINS, MAGNESIUM ION
Authors:Kim, H, Fromme, R, Wachter, R.M.
Deposit date:2012-02-27
Release date:2013-02-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:A hinge migration mechanism unlocks the evolution of green-to-red photoconversion in GFP-like proteins.
Structure, 23, 2015
6OGB
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BU of 6ogb by Molmil
Crystal structure of Green Fluorescent Protein (GFP); S65T, Y66(3-I1Y), H148D; circular permutant (50-51)
Descriptor: ACETATE ION, Crystal structure of Green Fluorescent Protein (GFP); S65T, Y66(3-I1Y), ...
Authors:Lin, C.-Y, Boxer, S.G.
Deposit date:2019-04-02
Release date:2020-04-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Unusual Spectroscopic and Electric Field Sensitivity of Chromophores with Short Hydrogen Bonds: GFP and PYP as Model Systems.
J.Phys.Chem.B, 124, 2020
6OGA
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BU of 6oga by Molmil
Crystal structure of Green Fluorescent Protein (GFP); S65T, Y66(3-Br1Y), H148D; circular permutant (50-51)
Descriptor: ACETATE ION, Crystal structure of Green Fluorescent Protein (GFP); S65T, Y66(3-Br1Y), ...
Authors:Lin, C.-Y, Boxer, S.G.
Deposit date:2019-04-02
Release date:2020-04-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Unusual Spectroscopic and Electric Field Sensitivity of Chromophores with Short Hydrogen Bonds: GFP and PYP as Model Systems.
J.Phys.Chem.B, 124, 2020
6OGC
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BU of 6ogc by Molmil
Crystal structure of Green Fluorescent Protein (GFP); S65T, Y66(2,3-F2Y), H148D; circular permutant (50-51)
Descriptor: Crystal structure of Green Fluorescent Protein (GFP); S65T, Y66(2,3-F2Y), H148D; circular permutant (50-51)
Authors:Lin, C.-Y, Boxer, S.G.
Deposit date:2019-04-02
Release date:2020-04-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.178 Å)
Cite:Unusual Spectroscopic and Electric Field Sensitivity of Chromophores with Short Hydrogen Bonds: GFP and PYP as Model Systems.
J.Phys.Chem.B, 124, 2020
6OG9
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BU of 6og9 by Molmil
Crystal structure of Green Fluorescent Protein (GFP); S65T, Y66(3,5-F2Y), H148D; circular permutant (50-51)
Descriptor: Crystal structure of Green Fluorescent Protein (GFP); S65T, Y66(3,5-F2Y), H148D; circular permutant (50-51)
Authors:Lin, C.-Y, Deng, A, Boxer, S.G.
Deposit date:2019-04-02
Release date:2020-04-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.798 Å)
Cite:Unusual Spectroscopic and Electric Field Sensitivity of Chromophores with Short Hydrogen Bonds: GFP and PYP as Model Systems.
J.Phys.Chem.B, 124, 2020
4DXO
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BU of 4dxo by Molmil
Crystal Structure of a reconstructed Kaede-type Red Fluorescent Protein, LEA X(6)
Descriptor: LEA X(6) GFP-LIKE PROTEINS, SODIUM ION
Authors:Kim, H, Fromme, R, Wachter, R.M.
Deposit date:2012-02-27
Release date:2013-02-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A hinge migration mechanism unlocks the evolution of green-to-red photoconversion in GFP-like proteins.
Structure, 23, 2015

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