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5YDK

Crystal structure of RNF168 UDM1 in complex with Lys63-linked diubiquitin, tetrameric form

Resources
File formatFile name (file size)
PDBx/mmCIF5ydk.cif.gz Display(197.97 KB)
5ydk.cif
PDBx/mmJSONall5ydk.json.gz Display (Tree)(123.61 KB)
5ydk.json
no-atom5ydk-noatom.json.gz Display (Header)(15.21 KB)
5ydk-noatom.json
add only5ydk-plus.json.gz Display(1.92 KB)
5ydk-plus.json
PDBMLall5ydk.xml.gz Display(273.11 KB)
5ydk.xml
no-atom5ydk-noatom.xml.gz Display(39.75 KB)
5ydk-noatom.xml
ext-atom5ydk-extatom.xml.gz Display(174.57 KB)
5ydk-extatom.xml
pdb_nextgenallpdb_00005ydk_xyz-enrich.cif.gz Display(215.77 KB)
pdb_00005ydk_xyz-enrich.cif
no-atompdb_00005ydk_xyz-no-atom-enrich.xml.gz Display(50.52 KB)
pdb_00005ydk_xyz-no-atom-enrich.xml
ng-only5ydk-plus.json.gz Display(1.85 KB)
5ydk-plus.json
PDBpdb5ydk.ent.gz Display(160.43 KB)
pdb5ydk.ent
RDF5ydk.rdf.gz Visualize(111.91 KB)
5ydk.rdf
Structure factorsr5ydksf.ent.gz Display(1012.37 KB)
r5ydksf.ent
Biological unit (mmCIF format)5ydk-assembly1.cif.gz Display(51.91 KB)
5ydk-assembly1.cif (A,B,D)

*author defined assembly, 3 molecule(s) (trimeric)

5ydk-assembly2.cif.gz Display(51.19 KB)
5ydk-assembly2.cif (G,H,J)

*author defined assembly, 3 molecule(s) (trimeric)

5ydk-assembly3.cif.gz Display(51.25 KB)
5ydk-assembly3.cif (F,E,C)

*author defined assembly, 3 molecule(s) (trimeric)

5ydk-assembly4.cif.gz Display(51.11 KB)
5ydk-assembly4.cif (L,K,I)

*author defined assembly, 3 molecule(s) (trimeric)

Biological unit (PDB format)5ydk.pdb1.gz Display(41.60 KB)
5ydk.pdb1 (A,B,D)

*author defined assembly, 3 molecule(s) (trimeric)

5ydk.pdb2.gz Display(40.50 KB)
5ydk.pdb2 (G,H,J)

*author defined assembly, 3 molecule(s) (trimeric)

5ydk.pdb3.gz Display(41.25 KB)
5ydk.pdb3 (F,E,C)

*author defined assembly, 3 molecule(s) (trimeric)

5ydk.pdb4.gz Display(40.60 KB)
5ydk.pdb4 (L,K,I)

*author defined assembly, 3 molecule(s) (trimeric)

Validation reportsPDF5ydk_validation.pdf.gz Display(521.08 KB)
5ydk_validation.pdf
PDF-full5ydk_full_validation.pdf.gz Display(530.10 KB)
5ydk_full_validation.pdf
mmCIF5ydk_validation.cif.gz Display(50.53 KB)
5ydk_validation.cif
XML5ydk_validation.xml.gz Display(35.78 KB)
5ydk_validation.xml
PNG5ydk_multipercentile_validation.png.gz Display(172.00 KB)
5ydk_multipercentile_validation.png
SVG5ydk_multipercentile_validation.svg.gz Display(959.00 B)
5ydk_multipercentile_validation.svg
EDMap2fo-fc (PDBx/mmCIF)5ydk_validation_2fo-fc_map_coef.cif.gz Display(421.39 KB)
5ydk_validation_2fo-fc_map_coef.cif
fo-fc (PDBx/mmCIF)5ydk_validation_fo-fc_map_coef.cif.gz Display(408.79 KB)
5ydk_validation_fo-fc_map_coef.cif
2fo-fc (MTZ)5ydk_validation_2fo-fc_map_coef.mtz Visualize(975.93 KB)
fo-fc (MTZ)5ydk_validation_fo-fc_map_coef.mtz Visualize(975.93 KB)

237992

PDB entries from 2025-06-25

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