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9YKS

Crystal structure of the G9a (EHMT2) SET domain in complex with SAM and TNG917

This is a non-PDB format compatible entry.
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues252
DetailsDomain: {"description":"Pre-SET","evidences":[{"source":"PROSITE-ProRule","id":"PRU00157","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues351
DetailsDomain: {"description":"SET","evidences":[{"source":"PROSITE-ProRule","id":"PRU00190","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues64
DetailsDomain: {"description":"Post-SET"}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues69
DetailsRegion: {"description":"Interaction with histone H3","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues64
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"20084102","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"24900801","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2O8J","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4NVQ","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"20084102","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2O8J","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4NVQ","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"27648579","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5T0M","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI8
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"20084102","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2O8J","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI9
Number of Residues4
DetailsSite: {"description":"Histone H3K9me binding","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

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PDB entries from 2026-06-17

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