9XAG
Cryo-EM structure of the 90S pre-ribosome (Enp1-Rrp12 Mut) from Chaetomium thermophilum, state B1
This is a non-PDB format compatible entry.
Functional Information from PROSITE/UniProt
| site_id | PS00018 |
| Number of Residues | 13 |
| Details | EF_HAND_1 EF-hand calcium-binding domain. DEDEDKQVQigDM |
| Chain | Residue | Details |
| UE | ASP328-MET340 |
| site_id | PS00052 |
| Number of Residues | 27 |
| Details | RIBOSOMAL_S7 Ribosomal protein S7 signature. ErLtnsLMmhgrnnGKKlmavrIVahA |
| Chain | Residue | Details |
| Cc | GLU78-ALA104 |
| site_id | PS00053 |
| Number of Residues | 18 |
| Details | RIBOSOMAL_S8 Ribosomal protein S8 signature. GyvILTTSaGIMdheeAR |
| Chain | Residue | Details |
| Cm | GLY100-ARG117 |
| site_id | PS00054 |
| Number of Residues | 23 |
| Details | RIBOSOMAL_S11 Ribosomal protein S11 signature. LrALarS.GMkIgrieDvTPtPSD |
| Chain | Residue | Details |
| Ci | LEU115-ASP137 |
| site_id | PS00055 |
| Number of Residues | 8 |
| Details | RIBOSOMAL_S12 Ribosomal protein S12 signature. KqPNSAiR |
| Chain | Residue | Details |
| Cn | LYS62-ARG69 |
| site_id | PS00056 |
| Number of Residues | 13 |
| Details | RIBOSOMAL_S17 Ribosomal protein S17 signature. GDmVvVgQcRPLS |
| Chain | Residue | Details |
| Ck | GLY125-SER137 |
| site_id | PS00237 |
| Number of Residues | 17 |
| Details | G_PROTEIN_RECEP_F1_1 G-protein coupled receptors family 1 signature. VETsVIGSVATDRSIiL |
| Chain | Residue | Details |
| CM | VAL208-LEU224 |
| site_id | PS00360 |
| Number of Residues | 19 |
| Details | RIBOSOMAL_S9 Ribosomal protein S9 signature. GGGhtSQvyAvrqAiAKSI |
| Chain | Residue | Details |
| Cj | GLY71-ILE89 |
| site_id | PS00362 |
| Number of Residues | 31 |
| Details | RIBOSOMAL_S15 Ribosomal protein S15 signature. VrkHLernRkDkdSkfrLilIesrihrLarY |
| Chain | Residue | Details |
| Ch | VAL98-TYR128 |
| site_id | PS00528 |
| Number of Residues | 15 |
| Details | RIBOSOMAL_S4E Ribosomal protein S4e signature. HqKRLSaPshWlLdK |
| Chain | Residue | Details |
| Cb | HIS8-LYS22 |
| site_id | PS00529 |
| Number of Residues | 23 |
| Details | RIBOSOMAL_S24E Ribosomal protein S24e signature. YGggKTtGFAlIYDSpealkkfE |
| Chain | Residue | Details |
| Co | TYR395-GLU417 |
| site_id | PS00566 |
| Number of Residues | 15 |
| Details | FIBRILLARIN Fibrillarin signature. GAVYAVEFShRsgRD |
| Chain | Residue | Details |
| CA | GLY178-ASP192 |
| site_id | PS00578 |
| Number of Residues | 12 |
| Details | RIBOSOMAL_S6E Ribosomal protein S6e signature. ITGGnDkqGfPM |
| Chain | Residue | Details |
| Cd | ILE52-MET63 |
| site_id | PS00632 |
| Number of Residues | 25 |
| Details | RIBOSOMAL_S4 Ribosomal protein S4 signature. LErRLqtlVYKlglAkSihhARvLI |
| Chain | Residue | Details |
| Cg | LEU103-ILE127 |
| site_id | PS00646 |
| Number of Residues | 14 |
| Details | RIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGlRHywGlrVRGQ |
| Chain | Residue | Details |
| Cl | ARG123-GLN136 |
| site_id | PS00678 |
| Number of Residues | 15 |
| Details | WD_REPEATS_1 Trp-Asp (WD) repeats signature. LASGskDtDIIVWDL |
| Chain | Residue | Details |
| UL | LEU125-LEU139 | |
| UO | LEU160-LEU174 | |
| UO | LEU205-ALA219 | |
| CM | ILE82-LEU96 | |
| UU | VAL637-PHE651 | |
| UU | ILE722-LEU736 | |
| UL | LEU189-LEU203 | |
| UL | MET440-ILE454 | |
| UL | VAL523-PHE537 | |
| UG | MET315-ILE329 | |
| UA | ILE355-VAL369 | |
| UA | LEU397-LEU411 | |
| UM | LEU126-ILE140 | |
| UM | VAL615-LEU629 |
| site_id | PS00948 |
| Number of Residues | 14 |
| Details | RIBOSOMAL_S7E Ribosomal protein S7e signature. RLtRELEKKFSdRH |
| Chain | Residue | Details |
| Ce | ARG82-HIS95 |
| site_id | PS00961 |
| Number of Residues | 9 |
| Details | RIBOSOMAL_S28E Ribosomal protein S28e signature. ESEREARrL |
| Chain | Residue | Details |
| Cp | GLU59-LEU67 |
| site_id | PS01082 |
| Number of Residues | 18 |
| Details | RIBOSOMAL_L7AE Ribosomal protein L7Ae signature. CeeknVPYvyVpSKvaLG |
| Chain | Residue | Details |
| CE | CYS72-GLY89 |
| site_id | PS01191 |
| Number of Residues | 13 |
| Details | RIBOSOMAL_S3AE Ribosomal protein S3Ae signature. LkGRIfEvCLaDL |
| Chain | Residue | Details |
| Ca | LEU61-LEU73 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI10 |
| Number of Residues | 32 |
| Details | Compositional bias: {"description":"Basic residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI25 |
| Number of Residues | 52 |
| Details | Domain: {"description":"KH","evidences":[{"evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI34 |
| Number of Residues | 40 |
| Details | Repeat: {"description":"WD 1","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI35 |
| Number of Residues | 39 |
| Details | Repeat: {"description":"WD 2","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI36 |
| Number of Residues | 38 |
| Details | Repeat: {"description":"WD 3","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI37 |
| Number of Residues | 39 |
| Details | Repeat: {"description":"WD 4","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI38 |
| Number of Residues | 7 |
| Details | Motif: {"description":"Nuclear localization signal","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
