9UMG
Cryo-EM structure of VTC complex(Vtc5/Vtc4/Vtc3/Vtc1)
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000329 | cellular_component | fungal-type vacuole membrane |
| A | 0000421 | cellular_component | autophagosome membrane |
| A | 0003729 | molecular_function | mRNA binding |
| A | 0005515 | molecular_function | protein binding |
| A | 0005774 | cellular_component | vacuolar membrane |
| A | 0005783 | cellular_component | endoplasmic reticulum |
| A | 0005789 | cellular_component | endoplasmic reticulum membrane |
| A | 0005938 | cellular_component | cell cortex |
| A | 0006797 | biological_process | polyphosphate metabolic process |
| A | 0006799 | biological_process | polyphosphate biosynthetic process |
| A | 0007034 | biological_process | vacuolar transport |
| A | 0016237 | biological_process | microautophagy |
| A | 0031965 | cellular_component | nuclear membrane |
| A | 0033254 | cellular_component | vacuolar transporter chaperone complex |
| A | 0042144 | biological_process | vacuole fusion, non-autophagic |
| A | 0061736 | biological_process | engulfment of target by autophagosome |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 357 |
| Details | Transmembrane: {"description":"Helical","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 23 |
| Details | Topological domain: {"description":"Vacuolar","evidences":[{"source":"PubMed","id":"12584253","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 64 |
| Details | Topological domain: {"description":"Cytoplasmic","evidences":[{"source":"PubMed","id":"12584253","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 1 |
| Details | Active site: {"evidences":[{"source":"PubMed","id":"19390046","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 8 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"19390046","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 28 |
| Details | Coiled coil: {"evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 16 |
| Details | Topological domain: {"description":"Cytoplasmic","evidences":[{"evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI8 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"19779198","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
