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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

9U5F

cryo-EM structure of l-SPD binding to D2R

This is a non-PDB format compatible entry.
Functional Information from PROSITE/UniProt
site_idPS00290
Number of Residues7
DetailsIG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YTCEATH
ChainResidueDetails
LTYR192-HIS198
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues44
DetailsTransmembrane: {"description":"Helical; Name=1","evidences":[{"source":"PubMed","id":"32528175","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"33571431","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"37221270","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"39103320","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"40683247","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6VMS","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8TZQ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8U02","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI2
Number of Residues18
DetailsTopological domain: {"description":"Cytoplasmic","evidences":[{"source":"PubMed","id":"32528175","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"33571431","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"37221270","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"39103320","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"40683247","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6VMS","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8TZQ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8U02","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI3
Number of Residues44
DetailsTransmembrane: {"description":"Helical; Name=2","evidences":[{"source":"PubMed","id":"32528175","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"33571431","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"37221270","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"39103320","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"40683247","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6VMS","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8TZQ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8U02","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI4
Number of Residues84
DetailsTopological domain: {"description":"Extracellular","evidences":[{"source":"PubMed","id":"32528175","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"33571431","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"37221270","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"39103320","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"40683247","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6VMS","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8TZQ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8U02","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI5
Number of Residues42
DetailsTransmembrane: {"description":"Helical; Name=3","evidences":[{"source":"PubMed","id":"32528175","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"33571431","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"37221270","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"39103320","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"40683247","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6VMS","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8TZQ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8U02","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI6
Number of Residues40
DetailsTransmembrane: {"description":"Helical; Name=4","evidences":[{"source":"PubMed","id":"32528175","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"33571431","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"37221270","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"39103320","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"40683247","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6VMS","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8TZQ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8U02","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI7
Number of Residues48
DetailsTransmembrane: {"description":"Helical; Name=5","evidences":[{"source":"PubMed","id":"32528175","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"33571431","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"37221270","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"39103320","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"40683247","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6VMS","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8TZQ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8U02","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI8
Number of Residues42
DetailsTransmembrane: {"description":"Helical; Name=6","evidences":[{"source":"PubMed","id":"32528175","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"33571431","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"37221270","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"39103320","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"40683247","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6VMS","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8TZQ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8U02","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI9
Number of Residues42
DetailsTransmembrane: {"description":"Helical; Name=7","evidences":[{"source":"PubMed","id":"32528175","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"33571431","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"37221270","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"39103320","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"40683247","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6VMS","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8TZQ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8U02","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI10
Number of Residues8
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"39103320","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"8TZQ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8U02","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

260626

PDB entries from 2026-10-07

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