9TAN
Local refinement of E. coli Complex I D79N NuoA mutant hydrophilic domain in LMNG
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| B | 0003954 | molecular_function | NADH dehydrogenase activity |
| B | 0005506 | molecular_function | iron ion binding |
| B | 0005886 | cellular_component | plasma membrane |
| B | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| B | 0009060 | biological_process | aerobic respiration |
| B | 0015990 | biological_process | electron transport coupled proton transport |
| B | 0016020 | cellular_component | membrane |
| B | 0022904 | biological_process | respiratory electron transport chain |
| B | 0030964 | cellular_component | NADH dehydrogenase complex |
| B | 0045271 | cellular_component | respiratory chain complex I |
| B | 0050136 | molecular_function | NADH dehydrogenase (quinone) (non-electrogenic) activity |
| B | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
| C | 0003954 | molecular_function | NADH dehydrogenase activity |
| C | 0005515 | molecular_function | protein binding |
| C | 0005737 | cellular_component | cytoplasm |
| C | 0005886 | cellular_component | plasma membrane |
| C | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| C | 0016020 | cellular_component | membrane |
| C | 0016655 | molecular_function | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor |
| C | 0022904 | biological_process | respiratory electron transport chain |
| C | 0030964 | cellular_component | NADH dehydrogenase complex |
| C | 0045271 | cellular_component | respiratory chain complex I |
| C | 0050136 | molecular_function | NADH dehydrogenase (quinone) (non-electrogenic) activity |
| C | 1902600 | biological_process | proton transmembrane transport |
| E | 0003954 | molecular_function | NADH dehydrogenase activity |
| E | 0005515 | molecular_function | protein binding |
| E | 0005886 | cellular_component | plasma membrane |
| E | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| E | 0010181 | molecular_function | FMN binding |
| E | 0016020 | cellular_component | membrane |
| E | 0022904 | biological_process | respiratory electron transport chain |
| E | 0030964 | cellular_component | NADH dehydrogenase complex |
| E | 0045271 | cellular_component | respiratory chain complex I |
| E | 0051537 | molecular_function | 2 iron, 2 sulfur cluster binding |
| E | 1902600 | biological_process | proton transmembrane transport |
| F | 0003954 | molecular_function | NADH dehydrogenase activity |
| F | 0005886 | cellular_component | plasma membrane |
| F | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| F | 0009060 | biological_process | aerobic respiration |
| F | 0010181 | molecular_function | FMN binding |
| F | 0016020 | cellular_component | membrane |
| F | 0022904 | biological_process | respiratory electron transport chain |
| F | 0030964 | cellular_component | NADH dehydrogenase complex |
| F | 0045271 | cellular_component | respiratory chain complex I |
| F | 0045333 | biological_process | cellular respiration |
| F | 0051287 | molecular_function | NAD binding |
| F | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
| F | 1902600 | biological_process | proton transmembrane transport |
| G | 0003954 | molecular_function | NADH dehydrogenase activity |
| G | 0005515 | molecular_function | protein binding |
| G | 0005737 | cellular_component | cytoplasm |
| G | 0005886 | cellular_component | plasma membrane |
| G | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| G | 0009060 | biological_process | aerobic respiration |
| G | 0010181 | molecular_function | FMN binding |
| G | 0016020 | cellular_component | membrane |
| G | 0022904 | biological_process | respiratory electron transport chain |
| G | 0030964 | cellular_component | NADH dehydrogenase complex |
| G | 0045271 | cellular_component | respiratory chain complex I |
| G | 0045333 | biological_process | cellular respiration |
| G | 0051537 | molecular_function | 2 iron, 2 sulfur cluster binding |
| G | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
| G | 1902600 | biological_process | proton transmembrane transport |
| I | 0003954 | molecular_function | NADH dehydrogenase activity |
| I | 0005506 | molecular_function | iron ion binding |
| I | 0005886 | cellular_component | plasma membrane |
| I | 0009060 | biological_process | aerobic respiration |
| I | 0016020 | cellular_component | membrane |
| I | 0022904 | biological_process | respiratory electron transport chain |
| I | 0030964 | cellular_component | NADH dehydrogenase complex |
| I | 0045271 | cellular_component | respiratory chain complex I |
| I | 0050136 | molecular_function | NADH dehydrogenase (quinone) (non-electrogenic) activity |
| I | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
Functional Information from PROSITE/UniProt
| site_id | PS00198 |
| Number of Residues | 12 |
| Details | 4FE4S_FER_1 4Fe-4S ferredoxin-type iron-sulfur binding region signature. CvACNlCAvACP |
| Chain | Residue | Details |
| I | CYS60-PRO71 | |
| I | CYS99-PRO110 |
| site_id | PS00535 |
| Number of Residues | 12 |
| Details | COMPLEX1_49K Respiratory chain NADH dehydrogenase 49 Kd subunit signature. HHRGaEKMgErQ |
| Chain | Residue | Details |
| C | HIS252-GLN263 |
| site_id | PS00542 |
| Number of Residues | 22 |
| Details | COMPLEX1_30K Respiratory chain NADH dehydrogenase 30 Kd subunit signature. EREtwDLFgitfdgHpnlRrIM |
| Chain | Residue | Details |
| C | GLU138-MET159 |
| site_id | PS00641 |
| Number of Residues | 18 |
| Details | COMPLEX1_75K_1 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. PyfCWhpalgsvGaCRqC |
| Chain | Residue | Details |
| G | PRO33-CYS50 |
| site_id | PS00642 |
| Number of Residues | 13 |
| Details | COMPLEX1_75K_2 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. CPvCEeGGnChLQ |
| Chain | Residue | Details |
| G | CYS105-GLN117 |
| site_id | PS00643 |
| Number of Residues | 11 |
| Details | COMPLEX1_75K_3 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. RCIaCyRCVrY |
| Chain | Residue | Details |
| G | ARG152-TYR162 |
| site_id | PS00644 |
| Number of Residues | 16 |
| Details | COMPLEX1_51K_1 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. GAGRYICGEETALINS |
| Chain | Residue | Details |
| F | GLY174-SER189 |
| site_id | PS00645 |
| Number of Residues | 12 |
| Details | COMPLEX1_51K_2 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. ESCGwCtPCRdG |
| Chain | Residue | Details |
| F | GLU349-GLY360 |
| site_id | PS01099 |
| Number of Residues | 19 |
| Details | COMPLEX1_24K Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. DgrFTllptcCLGnCdkGP |
| Chain | Residue | Details |
| E | ASP123-PRO141 |
| site_id | PS01150 |
| Number of Residues | 17 |
| Details | COMPLEX1_20K Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. GvDKFIPVDVYiPgCPP |
| Chain | Residue | Details |
| B | GLY144-PRO160 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_01356","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 386 |
| Details | Region: {"description":"NADH dehydrogenase I subunit D"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 8 |
| Details | Binding site: {"evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 76 |
| Details | Binding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 81 |
| Details | Domain: {"description":"2Fe-2S ferredoxin-type","evidences":[{"source":"PROSITE-ProRule","id":"PRU00465","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 39 |
| Details | Domain: {"description":"4Fe-4S His(Cys)3-ligated-type","evidences":[{"source":"PROSITE-ProRule","id":"PRU01184","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 56 |
| Details | Domain: {"description":"4Fe-4S Mo/W bis-MGD-type","evidences":[{"source":"PROSITE-ProRule","id":"PRU01004","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI8 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU01184","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI9 |
| Number of Residues | 30 |
| Details | Domain: {"description":"4Fe-4S ferredoxin-type 1"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI10 |
| Number of Residues | 29 |
| Details | Domain: {"description":"4Fe-4S ferredoxin-type 2"} |
| Chain | Residue | Details |






