9SVJ
Structural characterization of hibernating ribosomes in the Gram-negative pathogen Acinetobacter baumannii
This is a non-PDB format compatible entry.
Functional Information from PROSITE/UniProt
| site_id | PS00049 |
| Number of Residues | 27 |
| Details | RIBOSOMAL_L14 Ribosomal protein L14 signature. AVVVrtkfgirrp.DGsvirFddNaaVI |
| Chain | Residue | Details |
| j | ALA60-ILE86 |
| site_id | PS00052 |
| Number of Residues | 27 |
| Details | RIBOSOMAL_S7 Ribosomal protein S7 signature. SqTiakFMnhvmqdGKKsiaesIVygA |
| Chain | Residue | Details |
| G | SER20-ALA46 |
| site_id | PS00053 |
| Number of Residues | 18 |
| Details | RIBOSOMAL_S8 Ribosomal protein S8 signature. GiaIVSTSkGIMtdraAR |
| Chain | Residue | Details |
| H | GLY101-ARG118 |
| site_id | PS00054 |
| Number of Residues | 23 |
| Details | RIBOSOMAL_S11 Ribosomal protein S11 signature. VrALgaV.GYkInsitDvTPiPHD |
| Chain | Residue | Details |
| K | VAL96-IAS118 |
| site_id | PS00055 |
| Number of Residues | 8 |
| Details | RIBOSOMAL_S12 Ribosomal protein S12 signature. KkPNSAmR |
| Chain | Residue | Details |
| L | LYS43-ARG50 |
| site_id | PS00056 |
| Number of Residues | 13 |
| Details | RIBOSOMAL_S17 Ribosomal protein S17 signature. GDvVtIkEsRPIS |
| Chain | Residue | Details |
| Q | GLY57-SER69 |
| site_id | PS00057 |
| Number of Residues | 24 |
| Details | RIBOSOMAL_S18 Ribosomal protein S18 signature. IDYkd.IdtLkqYITEn.GKIvpsRI |
| Chain | Residue | Details |
| R | ILE21-ILE44 |
| site_id | PS00323 |
| Number of Residues | 25 |
| Details | RIBOSOMAL_S19 Ribosomal protein S19 signature. NGRnhvpviVtehmVGhkLGEFapT |
| Chain | Residue | Details |
| S | ASN53-THR77 |
| site_id | PS00358 |
| Number of Residues | 17 |
| Details | RIBOSOMAL_L5 Ribosomal protein L5 signature. MqlIAGQkpVvTlARkS |
| Chain | Residue | Details |
| f | MET57-SER73 |
| site_id | PS00360 |
| Number of Residues | 19 |
| Details | RIBOSOMAL_S9 Ribosomal protein S9 signature. GGGigGQagAirhGiTRAL |
| Chain | Residue | Details |
| I | GLY67-LEU85 |
| site_id | PS00361 |
| Number of Residues | 16 |
| Details | RIBOSOMAL_S10 Ribosomal protein S10 signature. AkrtGAqvcGPIpMPT |
| Chain | Residue | Details |
| J | ALA29-THR44 |
| site_id | PS00362 |
| Number of Residues | 31 |
| Details | RIBOSOMAL_S15 Ribosomal protein S15 signature. LqgHFkahKhDhhSrrgLirMvnqrrkLldY |
| Chain | Residue | Details |
| O | LEU39-TYR69 |
| site_id | PS00464 |
| Number of Residues | 25 |
| Details | RIBOSOMAL_L22 Ribosomal protein L22 signature. KriMpRAkGRadritkrtCHITVkV |
| Chain | Residue | Details |
| r | LYS83-VAL107 |
| site_id | PS00474 |
| Number of Residues | 24 |
| Details | RIBOSOMAL_L3 Ribosomal protein L3 signature. FtvgqivDvtGqSkGKGfqGgvkR |
| Chain | Residue | Details |
| d | PHE104-ARG127 |
| site_id | PS00475 |
| Number of Residues | 31 |
| Details | RIBOSOMAL_L15 Ribosomal protein L15 signature. RIVLsGeItra..FtVqgvaLTkgAkaaIeaaG |
| Chain | Residue | Details |
| k | ARG111-GLY141 |
| site_id | PS00525 |
| Number of Residues | 9 |
| Details | RIBOSOMAL_L6_1 Ribosomal protein L6 signature 1. PEpYKGKGV |
| Chain | Residue | Details |
| g | PRO154-VAL162 |
| site_id | PS00527 |
| Number of Residues | 23 |
| Details | RIBOSOMAL_S14 Ribosomal protein S14 signature. R.CgltgrphgyfrkFGLSRnKLR |
| Chain | Residue | Details |
| N | ARG63-ARG85 |
| site_id | PS00548 |
| Number of Residues | 35 |
| Details | RIBOSOMAL_S3 Ribosomal protein S3 signature. ARtewyreGrVplHt..LradIDyatmraeTtyGtiG |
| Chain | Residue | Details |
| C | ALA163-GLY197 |
| site_id | PS00582 |
| Number of Residues | 20 |
| Details | RIBOSOMAL_L33 Ribosomal protein L33 signature. YtTtKNkrtmPekMEikKFD |
| Chain | Residue | Details |
| 0 | TYR17-ASP36 |
| site_id | PS00585 |
| Number of Residues | 33 |
| Details | RIBOSOMAL_S5 Ribosomal protein S5 signature. GRifsFtAltVVGDgn.GrVGfGrgkar.EVpa.AI |
| Chain | Residue | Details |
| E | GLY27-ILE59 |
| site_id | PS00632 |
| Number of Residues | 25 |
| Details | RIBOSOMAL_S4 Ribosomal protein S4 signature. LEsRLdnvVYRmgfGsTraeARqLV |
| Chain | Residue | Details |
| D | LEU96-VAL120 |
| site_id | PS00646 |
| Number of Residues | 14 |
| Details | RIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGlRHrrSlpVRGQ |
| Chain | Residue | Details |
| M | ARG87-GLN100 |
| site_id | PS00651 |
| Number of Residues | 28 |
| Details | RIBOSOMAL_L9 Ribosomal protein L9 signature. GklGdkvsVkaGYgrNFLipqgkAvaaT |
| Chain | Residue | Details |
| h | GLY13-THR40 |
| site_id | PS00732 |
| Number of Residues | 10 |
| Details | RIBOSOMAL_S16 Ribosomal protein S16 signature. VvIRLARGGA |
| Chain | Residue | Details |
| P | VAL20-ALA29 |
| site_id | PS00784 |
| Number of Residues | 20 |
| Details | RIBOSOMAL_L34 Ribosomal protein L34 signature. KRTFQpselkRkrvh.GFraR |
| Chain | Residue | Details |
| 1 | LYS2-ARG21 |
| site_id | PS00828 |
| Number of Residues | 27 |
| Details | RIBOSOMAL_L36 Ribosomal protein L36 signature. CgsCkvIrRngvIrViCsaepRHkQrQ |
| Chain | Residue | Details |
| 3 | CYS11-GLN37 |
| site_id | PS00831 |
| Number of Residues | 15 |
| Details | RIBOSOMAL_L27 Ribosomal protein L27 signature. GnIIvRQRGtefhaG |
| Chain | Residue | Details |
| v | GLY34-GLY48 |
| site_id | PS00936 |
| Number of Residues | 26 |
| Details | RIBOSOMAL_L35 Ribosomal protein L35 signature. KTRrGAaKRFkatangfkrkqafk..RH |
| Chain | Residue | Details |
| 2 | LYS5-HIS30 |
| site_id | PS00937 |
| Number of Residues | 17 |
| Details | RIBOSOMAL_L20 Ribosomal protein L20 signature. KrqfRaLWIARINagaR |
| Chain | Residue | Details |
| p | LYS54-ARG70 |
| site_id | PS00962 |
| Number of Residues | 12 |
| Details | RIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. MrDLLQAGAHFG |
| Chain | Residue | Details |
| B | MET8-GLY19 |
| site_id | PS00963 |
| Number of Residues | 25 |
| Details | RIBOSOMAL_S2_2 Ribosomal protein S2 signature 2. PdaLFViDvdhEaiaIkEaknlGIP |
| Chain | Residue | Details |
| B | PRO160-PRO184 |
| site_id | PS01015 |
| Number of Residues | 16 |
| Details | RIBOSOMAL_L19 Ribosomal protein L19 signature. VkRrGDVR.RAKLYYLR |
| Chain | Residue | Details |
| o | VAL89-ARG104 |
| site_id | PS01048 |
| Number of Residues | 10 |
| Details | RIBOSOMAL_S6 Ribosomal protein S6 signature. GrRQLAYpIN |
| Chain | Residue | Details |
| F | GLY43-ASN52 |
| site_id | PS01108 |
| Number of Residues | 18 |
| Details | RIBOSOMAL_L24 Ribosomal protein L24 signature. GDqViVIaGkeKGkq.GtV |
| Chain | Residue | Details |
| t | GLY7-VAL24 |
| site_id | PS01143 |
| Number of Residues | 22 |
| Details | RIBOSOMAL_L31 Ribosomal protein L31 signature. DVcsacHPFYTgkqknvdtg....GR |
| Chain | Residue | Details |
| 4 | ASP36-ARG57 |
| site_id | PS01167 |
| Number of Residues | 23 |
| Details | RIBOSOMAL_L17 Ribosomal protein L17 signature. IkTTlpKaKelrrvaEpLITlAK |
| Chain | Residue | Details |
| m | ILE34-LYS56 |
| site_id | PS01169 |
| Number of Residues | 23 |
| Details | RIBOSOMAL_L21 Ribosomal protein L21 signature. IriiKmrrRKhyrkqqGHRQwfT |
| Chain | Residue | Details |
| q | ILE72-THR94 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI4 |
| Number of Residues | 68 |
| Details | Domain: {"description":"KH type-2","evidences":[{"source":"HAMAP-Rule","id":"MF_01309","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI11 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"3-methylthioaspartic acid","evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI14 |
| Number of Residues | 10 |
| Details | Compositional bias: {"description":"Basic and acidic residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
| Chain | Residue | Details |
