| Chain | GOid | namespace | contents |
| A | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| A | 0001172 | biological_process | RNA-templated transcription |
| A | 0003676 | molecular_function | nucleic acid binding |
| A | 0003677 | molecular_function | DNA binding |
| A | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
| A | 0003968 | molecular_function | RNA-directed RNA polymerase activity |
| A | 0005634 | cellular_component | nucleus |
| A | 0005654 | cellular_component | nucleoplasm |
| A | 0005694 | cellular_component | chromosome |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0016740 | molecular_function | transferase activity |
| A | 0016779 | molecular_function | nucleotidyltransferase activity |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| B | 0000781 | cellular_component | chromosome, telomeric region |
| B | 0001172 | biological_process | RNA-templated transcription |
| B | 0003682 | molecular_function | chromatin binding |
| B | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
| B | 0003968 | molecular_function | RNA-directed RNA polymerase activity |
| B | 0005634 | cellular_component | nucleus |
| B | 0005654 | cellular_component | nucleoplasm |
| B | 0005665 | cellular_component | RNA polymerase II, core complex |
| B | 0006366 | biological_process | transcription by RNA polymerase II |
| B | 0008270 | molecular_function | zinc ion binding |
| B | 0016740 | molecular_function | transferase activity |
| B | 0016779 | molecular_function | nucleotidyltransferase activity |
| B | 0016787 | molecular_function | hydrolase activity |
| B | 0034062 | molecular_function | 5'-3' RNA polymerase activity |
| B | 0046872 | molecular_function | metal ion binding |
| C | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| C | 0005634 | cellular_component | nucleus |
| C | 0005654 | cellular_component | nucleoplasm |
| C | 0005665 | cellular_component | RNA polymerase II, core complex |
| C | 0005829 | cellular_component | cytosol |
| C | 0006366 | biological_process | transcription by RNA polymerase II |
| E | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| E | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
| E | 0005634 | cellular_component | nucleus |
| E | 0005654 | cellular_component | nucleoplasm |
| E | 0005665 | cellular_component | RNA polymerase II, core complex |
| E | 0005666 | cellular_component | RNA polymerase III complex |
| E | 0005736 | cellular_component | RNA polymerase I complex |
| E | 0006362 | biological_process | transcription elongation by RNA polymerase I |
| E | 0006366 | biological_process | transcription by RNA polymerase II |
| E | 0042797 | biological_process | tRNA transcription by RNA polymerase III |
| F | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| F | 0001650 | cellular_component | fibrillar center |
| F | 0005634 | cellular_component | nucleus |
| F | 0005654 | cellular_component | nucleoplasm |
| F | 0005665 | cellular_component | RNA polymerase II, core complex |
| F | 0005666 | cellular_component | RNA polymerase III complex |
| F | 0005736 | cellular_component | RNA polymerase I complex |
| F | 0006366 | biological_process | transcription by RNA polymerase II |
| G | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| G | 0005634 | cellular_component | nucleus |
| G | 0006352 | biological_process | DNA-templated transcription initiation |
| H | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| H | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
| H | 0005634 | cellular_component | nucleus |
| H | 0005654 | cellular_component | nucleoplasm |
| H | 0005665 | cellular_component | RNA polymerase II, core complex |
| H | 0005666 | cellular_component | RNA polymerase III complex |
| H | 0005736 | cellular_component | RNA polymerase I complex |
| H | 0006351 | biological_process | DNA-templated transcription |
| I | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| I | 0001193 | biological_process | maintenance of transcriptional fidelity during transcription elongation by RNA polymerase II |
| I | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
| I | 0005634 | cellular_component | nucleus |
| I | 0005654 | cellular_component | nucleoplasm |
| I | 0005665 | cellular_component | RNA polymerase II, core complex |
| I | 0005730 | cellular_component | nucleolus |
| I | 0006283 | biological_process | transcription-coupled nucleotide-excision repair |
| I | 0006366 | biological_process | transcription by RNA polymerase II |
| I | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
| I | 0008270 | molecular_function | zinc ion binding |
| I | 0046872 | molecular_function | metal ion binding |
| J | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| J | 0005634 | cellular_component | nucleus |
| J | 0005665 | cellular_component | RNA polymerase II, core complex |
| J | 0008270 | molecular_function | zinc ion binding |
| J | 0046872 | molecular_function | metal ion binding |
| K | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| K | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
| K | 0005634 | cellular_component | nucleus |
| K | 0005665 | cellular_component | RNA polymerase II, core complex |
| K | 0006366 | biological_process | transcription by RNA polymerase II |
| L | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| L | 0005634 | cellular_component | nucleus |
| L | 0005654 | cellular_component | nucleoplasm |
| L | 0005665 | cellular_component | RNA polymerase II, core complex |
| L | 0005666 | cellular_component | RNA polymerase III complex |
| L | 0005730 | cellular_component | nucleolus |
| L | 0005736 | cellular_component | RNA polymerase I complex |
| L | 0006366 | biological_process | transcription by RNA polymerase II |
| L | 0008270 | molecular_function | zinc ion binding |
| L | 0046872 | molecular_function | metal ion binding |
| M | 0001825 | biological_process | blastocyst formation |
| M | 0003723 | molecular_function | RNA binding |
| M | 0005515 | molecular_function | protein binding |
| M | 0005634 | cellular_component | nucleus |
| M | 0005654 | cellular_component | nucleoplasm |
| M | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| M | 0006397 | biological_process | mRNA processing |
| M | 0008023 | cellular_component | transcription elongation factor complex |
| M | 0008380 | biological_process | RNA splicing |
| M | 0031491 | molecular_function | nucleosome binding |
| M | 0034728 | biological_process | nucleosome organization |
| M | 0042393 | molecular_function | histone binding |
| M | 0045191 | biological_process | regulation of isotype switching |
| M | 0051028 | biological_process | mRNA transport |
| M | 0051147 | biological_process | regulation of muscle cell differentiation |
| M | 0140673 | biological_process | transcription elongation-coupled chromatin remodeling |
| Q | 0000122 | biological_process | negative regulation of transcription by RNA polymerase II |
| Q | 0000791 | cellular_component | euchromatin |
| Q | 0000993 | molecular_function | RNA polymerase II complex binding |
| Q | 0001711 | biological_process | endodermal cell fate commitment |
| Q | 0001826 | biological_process | inner cell mass cell differentiation |
| Q | 0001829 | biological_process | trophectodermal cell differentiation |
| Q | 0001832 | biological_process | blastocyst growth |
| Q | 0001835 | biological_process | blastocyst hatching |
| Q | 0005515 | molecular_function | protein binding |
| Q | 0005634 | cellular_component | nucleus |
| Q | 0005654 | cellular_component | nucleoplasm |
| Q | 0006325 | biological_process | chromatin organization |
| Q | 0006357 | biological_process | regulation of transcription by RNA polymerase II |
| Q | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| Q | 0007259 | biological_process | cell surface receptor signaling pathway via JAK-STAT |
| Q | 0016055 | biological_process | Wnt signaling pathway |
| Q | 0016593 | cellular_component | Cdc73/Paf1 complex |
| Q | 0016607 | cellular_component | nuclear speck |
| Q | 0019827 | biological_process | stem cell population maintenance |
| Q | 0042169 | molecular_function | SH2 domain binding |
| Q | 0045638 | biological_process | negative regulation of myeloid cell differentiation |
| Q | 0045814 | biological_process | negative regulation of gene expression, epigenetic |
| Q | 0045944 | biological_process | positive regulation of transcription by RNA polymerase II |
| Q | 0070102 | biological_process | interleukin-6-mediated signaling pathway |
| Q | 0071222 | biological_process | cellular response to lipopolysaccharide |
| U | 0001650 | cellular_component | fibrillar center |
| U | 0001711 | biological_process | endodermal cell fate commitment |
| U | 0005515 | molecular_function | protein binding |
| U | 0005634 | cellular_component | nucleus |
| U | 0005654 | cellular_component | nucleoplasm |
| U | 0005813 | cellular_component | centrosome |
| U | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| U | 0016055 | biological_process | Wnt signaling pathway |
| U | 0016593 | cellular_component | Cdc73/Paf1 complex |
| U | 0019827 | biological_process | stem cell population maintenance |
| U | 0031124 | biological_process | mRNA 3'-end processing |
| U | 0032968 | biological_process | positive regulation of transcription elongation by RNA polymerase II |
| U | 0045638 | biological_process | negative regulation of myeloid cell differentiation |
| U | 0045944 | biological_process | positive regulation of transcription by RNA polymerase II |
| U | 1990269 | molecular_function | RNA polymerase II C-terminal domain phosphoserine binding |
| V | 0000122 | biological_process | negative regulation of transcription by RNA polymerase II |
| V | 0000993 | molecular_function | RNA polymerase II complex binding |
| V | 0001650 | cellular_component | fibrillar center |
| V | 0001711 | biological_process | endodermal cell fate commitment |
| V | 0003682 | molecular_function | chromatin binding |
| V | 0005515 | molecular_function | protein binding |
| V | 0005634 | cellular_component | nucleus |
| V | 0005654 | cellular_component | nucleoplasm |
| V | 0005737 | cellular_component | cytoplasm |
| V | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| V | 0016020 | cellular_component | membrane |
| V | 0016055 | biological_process | Wnt signaling pathway |
| V | 0016593 | cellular_component | Cdc73/Paf1 complex |
| V | 0019827 | biological_process | stem cell population maintenance |
| V | 0031124 | biological_process | mRNA 3'-end processing |
| V | 0034504 | biological_process | protein localization to nucleus |
| V | 0045638 | biological_process | negative regulation of myeloid cell differentiation |
| V | 0045944 | biological_process | positive regulation of transcription by RNA polymerase II |
| V | 0071222 | biological_process | cellular response to lipopolysaccharide |
| V | 1902808 | biological_process | positive regulation of cell cycle G1/S phase transition |
| W | 0000791 | cellular_component | euchromatin |
| W | 0005515 | molecular_function | protein binding |
| W | 0005634 | cellular_component | nucleus |
| W | 0005654 | cellular_component | nucleoplasm |
| W | 0005737 | cellular_component | cytoplasm |
| W | 0005829 | cellular_component | cytosol |
| W | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| W | 0016055 | biological_process | Wnt signaling pathway |
| W | 0016593 | cellular_component | Cdc73/Paf1 complex |
| W | 0045638 | biological_process | negative regulation of myeloid cell differentiation |
| W | 0055087 | cellular_component | Ski complex |
| W | 0070478 | biological_process | nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay |
| W | 0072344 | biological_process | rescue of stalled ribosome |
| X | 0000122 | biological_process | negative regulation of transcription by RNA polymerase II |
| X | 0000781 | cellular_component | chromosome, telomeric region |
| X | 0000993 | molecular_function | RNA polymerase II complex binding |
| X | 0001558 | biological_process | regulation of cell growth |
| X | 0001711 | biological_process | endodermal cell fate commitment |
| X | 0005515 | molecular_function | protein binding |
| X | 0005634 | cellular_component | nucleus |
| X | 0005654 | cellular_component | nucleoplasm |
| X | 0005829 | cellular_component | cytosol |
| X | 0006357 | biological_process | regulation of transcription by RNA polymerase II |
| X | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| X | 0008285 | biological_process | negative regulation of cell population proliferation |
| X | 0016055 | biological_process | Wnt signaling pathway |
| X | 0016593 | cellular_component | Cdc73/Paf1 complex |
| X | 0019827 | biological_process | stem cell population maintenance |
| X | 0030177 | biological_process | positive regulation of Wnt signaling pathway |
| X | 0031124 | biological_process | mRNA 3'-end processing |
| X | 0031442 | biological_process | positive regulation of mRNA 3'-end processing |
| X | 0031648 | biological_process | protein destabilization |
| X | 0032968 | biological_process | positive regulation of transcription elongation by RNA polymerase II |
| X | 0043066 | biological_process | negative regulation of apoptotic process |
| X | 0045638 | biological_process | negative regulation of myeloid cell differentiation |
| X | 0045944 | biological_process | positive regulation of transcription by RNA polymerase II |
| X | 0048147 | biological_process | negative regulation of fibroblast proliferation |
| X | 0050680 | biological_process | negative regulation of epithelial cell proliferation |
| X | 0071222 | biological_process | cellular response to lipopolysaccharide |
| X | 1902808 | biological_process | positive regulation of cell cycle G1/S phase transition |
| X | 2000134 | biological_process | negative regulation of G1/S transition of mitotic cell cycle |
| Y | 0000122 | biological_process | negative regulation of transcription by RNA polymerase II |
| Y | 0000993 | molecular_function | RNA polymerase II complex binding |
| Y | 0005515 | molecular_function | protein binding |
| Y | 0005634 | cellular_component | nucleus |
| Y | 0005654 | cellular_component | nucleoplasm |
| Y | 0006355 | biological_process | regulation of DNA-templated transcription |
| Y | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| Y | 0008270 | molecular_function | zinc ion binding |
| Y | 0032044 | cellular_component | DSIF complex |
| Y | 0032785 | biological_process | negative regulation of DNA-templated transcription, elongation |
| Y | 0032786 | biological_process | positive regulation of DNA-templated transcription, elongation |
| Y | 0034243 | biological_process | regulation of transcription elongation by RNA polymerase II |
| Y | 0034244 | biological_process | negative regulation of transcription elongation by RNA polymerase II |
| Y | 0045944 | biological_process | positive regulation of transcription by RNA polymerase II |
| Y | 0046872 | molecular_function | metal ion binding |
| Y | 0046982 | molecular_function | protein heterodimerization activity |
| Y | 0140870 | molecular_function | RNA polymerase inhibitor activity |
| Z | 0000122 | biological_process | negative regulation of transcription by RNA polymerase II |
| Z | 0003682 | molecular_function | chromatin binding |
| Z | 0003723 | molecular_function | RNA binding |
| Z | 0003729 | molecular_function | mRNA binding |
| Z | 0005515 | molecular_function | protein binding |
| Z | 0005634 | cellular_component | nucleus |
| Z | 0005654 | cellular_component | nucleoplasm |
| Z | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| Z | 0016239 | biological_process | positive regulation of macroautophagy |
| Z | 0019899 | molecular_function | enzyme binding |
| Z | 0032044 | cellular_component | DSIF complex |
| Z | 0032785 | biological_process | negative regulation of DNA-templated transcription, elongation |
| Z | 0032786 | biological_process | positive regulation of DNA-templated transcription, elongation |
| Z | 0032968 | biological_process | positive regulation of transcription elongation by RNA polymerase II |
| Z | 0034243 | biological_process | regulation of transcription elongation by RNA polymerase II |
| Z | 0045944 | biological_process | positive regulation of transcription by RNA polymerase II |
| Z | 0046982 | molecular_function | protein heterodimerization activity |
| Z | 0140870 | molecular_function | RNA polymerase inhibitor activity |
| a | 0001701 | biological_process | in utero embryonic development |
| a | 0005515 | molecular_function | protein binding |
| a | 0005634 | cellular_component | nucleus |
| a | 0005654 | cellular_component | nucleoplasm |
| a | 0006338 | biological_process | chromatin remodeling |
| a | 0006397 | biological_process | mRNA processing |
| a | 0008380 | biological_process | RNA splicing |
| a | 0010793 | biological_process | regulation of mRNA export from nucleus |
| a | 0016973 | biological_process | poly(A)+ mRNA export from nucleus |
| a | 0050684 | biological_process | regulation of mRNA processing |
| a | 0051028 | biological_process | mRNA transport |
| a | 0140673 | biological_process | transcription elongation-coupled chromatin remodeling |
| b | 0000993 | molecular_function | RNA polymerase II complex binding |
| b | 0005515 | molecular_function | protein binding |
| b | 0005634 | cellular_component | nucleus |
| b | 0005694 | cellular_component | chromosome |
| b | 0006281 | biological_process | DNA repair |
| b | 0006283 | biological_process | transcription-coupled nucleotide-excision repair |
| b | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| b | 0006974 | biological_process | DNA damage response |
| b | 0008023 | cellular_component | transcription elongation factor complex |
| b | 0030674 | molecular_function | protein-macromolecule adaptor activity |