9RMX

CryoEM reconstruction of integrase filament at the lumen of native HIV-1 cores (box size 34.2 nm)

Functional Information from GO Data

Chain	GOid	namespace	contents
a	0016032	biological_process	viral process
A	0003676	molecular_function	nucleic acid binding
A	0008270	molecular_function	zinc ion binding
A	0015074	biological_process	DNA integration
b	0016032	biological_process	viral process
B	0003676	molecular_function	nucleic acid binding
B	0008270	molecular_function	zinc ion binding
B	0015074	biological_process	DNA integration
c	0016032	biological_process	viral process
C	0003676	molecular_function	nucleic acid binding
C	0008270	molecular_function	zinc ion binding
C	0015074	biological_process	DNA integration
d	0016032	biological_process	viral process
D	0003676	molecular_function	nucleic acid binding
D	0008270	molecular_function	zinc ion binding
D	0015074	biological_process	DNA integration
e	0016032	biological_process	viral process
E	0003676	molecular_function	nucleic acid binding
E	0008270	molecular_function	zinc ion binding
E	0015074	biological_process	DNA integration
f	0016032	biological_process	viral process
F	0003676	molecular_function	nucleic acid binding
F	0008270	molecular_function	zinc ion binding
F	0015074	biological_process	DNA integration
g	0016032	biological_process	viral process
G	0003676	molecular_function	nucleic acid binding
G	0008270	molecular_function	zinc ion binding
G	0015074	biological_process	DNA integration
h	0016032	biological_process	viral process
H	0003676	molecular_function	nucleic acid binding
H	0008270	molecular_function	zinc ion binding
H	0015074	biological_process	DNA integration
i	0016032	biological_process	viral process
I	0003676	molecular_function	nucleic acid binding
I	0008270	molecular_function	zinc ion binding
I	0015074	biological_process	DNA integration
j	0016032	biological_process	viral process
J	0003676	molecular_function	nucleic acid binding
J	0008270	molecular_function	zinc ion binding
J	0015074	biological_process	DNA integration
k	0016032	biological_process	viral process
K	0003676	molecular_function	nucleic acid binding
K	0008270	molecular_function	zinc ion binding
K	0015074	biological_process	DNA integration
l	0016032	biological_process	viral process
L	0003676	molecular_function	nucleic acid binding
L	0008270	molecular_function	zinc ion binding
L	0015074	biological_process	DNA integration
m	0016032	biological_process	viral process
n	0016032	biological_process	viral process
o	0016032	biological_process	viral process
p	0016032	biological_process	viral process
q	0016032	biological_process	viral process
r	0016032	biological_process	viral process
s	0016032	biological_process	viral process
t	0016032	biological_process	viral process
u	0016032	biological_process	viral process
U	0016032	biological_process	viral process
v	0016032	biological_process	viral process
V	0016032	biological_process	viral process
w	0016032	biological_process	viral process
W	0016032	biological_process	viral process
x	0016032	biological_process	viral process
X	0016032	biological_process	viral process
y	0016032	biological_process	viral process
Y	0016032	biological_process	viral process
z	0016032	biological_process	viral process
Z	0016032	biological_process	viral process

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	451
Details	Zinc finger: {"description":"Integrase-type","evidences":[{"source":"PROSITE-ProRule","id":"PRU00450","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	48
Details	Binding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00450","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	16
Details	Binding site: {}

Chain

Residue

Details

---

site_id	SWS_FT_FI4
Number of Residues	8
Details	Binding site: {"evidences":[{"source":"UniProtKB","id":"P04585","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI5
Number of Residues	300
Details	Domain: {"description":"Integrase catalytic","evidences":[{"source":"PROSITE-ProRule","id":"PRU00457","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI6
Number of Residues	94
Details	DNA binding: {"description":"Integrase-type","evidences":[{"source":"PROSITE-ProRule","id":"PRU00506","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---