9P0X
Nanodisc-embedded human TF/FVIIa/XK1 in complex with 10H10 Fab (nanodisc-subtracted)
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| T | 0001938 | biological_process | positive regulation of endothelial cell proliferation |
| T | 0002020 | molecular_function | protease binding |
| T | 0002541 | biological_process | activation of plasma proteins involved in acute inflammatory response |
| T | 0002543 | biological_process | activation of blood coagulation via clotting cascade |
| T | 0004252 | molecular_function | serine-type endopeptidase activity |
| T | 0004896 | molecular_function | cytokine receptor activity |
| T | 0005515 | molecular_function | protein binding |
| T | 0005543 | molecular_function | phospholipid binding |
| T | 0005576 | cellular_component | extracellular region |
| T | 0005615 | cellular_component | extracellular space |
| T | 0005886 | cellular_component | plasma membrane |
| T | 0006950 | biological_process | response to stress |
| T | 0006974 | biological_process | DNA damage response |
| T | 0007596 | biological_process | blood coagulation |
| T | 0007599 | biological_process | hemostasis |
| T | 0008643 | biological_process | carbohydrate transport |
| T | 0009897 | cellular_component | external side of plasma membrane |
| T | 0009986 | cellular_component | cell surface |
| T | 0010628 | biological_process | positive regulation of gene expression |
| T | 0010641 | biological_process | positive regulation of platelet-derived growth factor receptor signaling pathway |
| T | 0015768 | biological_process | maltose transport |
| T | 0016020 | cellular_component | membrane |
| T | 0016485 | biological_process | protein processing |
| T | 0019221 | biological_process | cytokine-mediated signaling pathway |
| T | 0030288 | cellular_component | outer membrane-bounded periplasmic space |
| T | 0030335 | biological_process | positive regulation of cell migration |
| T | 0031012 | cellular_component | extracellular matrix |
| T | 0032008 | biological_process | positive regulation of TOR signaling |
| T | 0032757 | biological_process | positive regulation of interleukin-8 production |
| T | 0034219 | biological_process | carbohydrate transmembrane transport |
| T | 0034289 | biological_process | detection of maltose stimulus |
| T | 0042597 | cellular_component | periplasmic space |
| T | 0042956 | biological_process | maltodextrin transmembrane transport |
| T | 0043190 | cellular_component | ATP-binding cassette (ABC) transporter complex |
| T | 0045766 | biological_process | positive regulation of angiogenesis |
| T | 0050927 | biological_process | positive regulation of positive chemotaxis |
| T | 0055052 | cellular_component | ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing |
| T | 0060326 | biological_process | cell chemotaxis |
| T | 1901982 | molecular_function | maltose binding |
| T | 1905286 | cellular_component | serine-type peptidase complex |
| T | 2000353 | biological_process | positive regulation of endothelial cell apoptotic process |
Functional Information from PROSITE/UniProt
| site_id | PS00010 |
| Number of Residues | 12 |
| Details | ASX_HYDROXYL Aspartic acid and asparagine hydroxylation site. CkDglgeYtCtC |
| Chain | Residue | Details |
| X | CYS61-CYS72 | |
| V | CYS61-CYS72 |
| site_id | PS00011 |
| Number of Residues | 26 |
| Details | GLA_1 Vitamin K-dependent carboxylation domain. EcmEEtCsyeearEvfedsdktne.FW |
| Chain | Residue | Details |
| X | CGU16-TRP41 | |
| V | CGU16-TRP41 |
| site_id | PS00022 |
| Number of Residues | 12 |
| Details | EGF_1 EGF-like domain signature 1. CtCleGfeGKnC |
| Chain | Residue | Details |
| X | CYS70-CYS81 | |
| V | CYS70-CYS81 |
| site_id | PS00134 |
| Number of Residues | 6 |
| Details | TRYPSIN_HIS Serine proteases, trypsin family, histidine active site. VSAAHC |
| Chain | Residue | Details |
| S | VAL189-CYS194 |
| site_id | PS00135 |
| Number of Residues | 12 |
| Details | TRYPSIN_SER Serine proteases, trypsin family, serine active site. DSckGDSGGPHA |
| Chain | Residue | Details |
| S | ASP338-ALA349 |
| site_id | PS00280 |
| Number of Residues | 19 |
| Details | BPTI_KUNITZ_1 Pancreatic trypsin inhibitor (Kunitz) family signature. FiyGGCegnqnrFesleeC |
| Chain | Residue | Details |
| K | PHE54-CYS72 |
| site_id | PS00290 |
| Number of Residues | 7 |
| Details | IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YTCEATH |
| Chain | Residue | Details |
| L | TYR198-HIS204 |
| site_id | PS00621 |
| Number of Residues | 18 |
| Details | TISSUE_FACTOR Tissue factor signature. WKsKCfyTtDTECDLTDE |
| Chain | Residue | Details |
| T | TRP45-GLU62 |
| site_id | PS01037 |
| Number of Residues | 18 |
| Details | SBP_BACTERIAL_1 Bacterial extracellular solute-binding proteins, family 1 signature. PIAvEalSLIYNkdlLpN |
| Chain | Residue | Details |
| T | PRO357-ASN374 |
| site_id | PS01186 |
| Number of Residues | 12 |
| Details | EGF_2 EGF-like domain signature 2. CtCleGFegkn....C |
| Chain | Residue | Details |
| X | CYS70-CYS81 | |
| X | CYS109-CYS124 | |
| V | CYS112-CYS127 |
| site_id | PS01187 |
| Number of Residues | 25 |
| Details | EGF_CA Calcium-binding EGF-like domain signature. DgDQCetsp..........Cqnqgk..CkDglgeYtC |
| Chain | Residue | Details |
| X | ASP46-CYS70 | |
| V | ASP46-CYS70 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 72 |
| Details | Domain: {"description":"EGF-like 1; calcium-binding","evidences":[{"source":"PROSITE-ProRule","id":"PRU00076","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 1 |
| Details | Site: {"description":"Important for S-112 for O-xylosylation"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"4-carboxyglutamate","evidences":[{"source":"PROSITE-ProRule","id":"PRU00463","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"3264725","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"3486420","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"(3R)-3-hydroxyaspartate","evidences":[{"source":"PubMed","id":"3264725","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 1 |
| Details | Glycosylation: {"description":"O-linked (Xyl...) serine; alternate","evidences":[{"source":"PubMed","id":"1904059","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"2129367","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"21949356","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"2511201","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 1 |
| Details | Glycosylation: {"description":"O-linked (Fuc) serine","featureId":"CAR_000180","evidences":[{"source":"PubMed","id":"1904059","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"9023546","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"4-carboxyglutamate","evidences":[{"source":"PROSITE-ProRule","id":"PRU00463","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"6871167","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI8 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"(3R)-3-hydroxyaspartate","evidences":[{"source":"PubMed","id":"6871167","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI9 |
| Number of Residues | 239 |
| Details | Domain: {"description":"Peptidase S1","evidences":[{"source":"PROSITE-ProRule","id":"PRU00274","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI10 |
| Number of Residues | 3 |
| Details | Active site: {"description":"Charge relay system","evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI11 |
| Number of Residues | 1 |
| Details | Binding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI12 |
| Number of Residues | 1 |
| Details | Glycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"source":"PubMed","id":"19167329","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"3264725","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI13 |
| Number of Residues | 6 |
| Details | Motif: {"description":"WKS motif"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI14 |
| Number of Residues | 2 |
| Details | Glycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI15 |
| Number of Residues | 50 |
| Details | Domain: {"description":"BPTI/Kunitz inhibitor 1","evidences":[{"source":"PROSITE-ProRule","id":"PRU00031","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI16 |
| Number of Residues | 1 |
| Details | Site: {"description":"Reactive bond"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI17 |
| Number of Residues | 1 |
| Details | Glycosylation: {"description":"O-linked (GalNAc...) threonine; partial","evidences":[{"source":"PubMed","id":"19017259","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |






