9NFA
Cryo-EM structure of Ro60/La/minimal misfolded pre-5S rRNA complex with Fab, composite map
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| B | 0000049 | molecular_function | tRNA binding |
| B | 0000781 | cellular_component | chromosome, telomeric region |
| B | 0001682 | biological_process | tRNA 5'-leader removal |
| B | 0003723 | molecular_function | RNA binding |
| B | 0003729 | molecular_function | mRNA binding |
| B | 0005515 | molecular_function | protein binding |
| B | 0005634 | cellular_component | nucleus |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0005829 | cellular_component | cytosol |
| B | 0006400 | biological_process | tRNA modification |
| B | 0006409 | biological_process | tRNA export from nucleus |
| B | 0008033 | biological_process | tRNA processing |
| B | 0008266 | molecular_function | poly(U) RNA binding |
| B | 0008334 | biological_process | histone mRNA metabolic process |
| B | 0010494 | cellular_component | cytoplasmic stress granule |
| B | 0042780 | biological_process | tRNA 3'-end processing |
| B | 0045727 | biological_process | positive regulation of translation |
| B | 0071045 | biological_process | nuclear histone mRNA catabolic process |
| B | 0075522 | biological_process | IRES-dependent viral translational initiation |
| B | 1903608 | biological_process | protein localization to cytoplasmic stress granule |
| B | 1990825 | molecular_function | sequence-specific mRNA binding |
| B | 1990904 | cellular_component | ribonucleoprotein complex |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 92 |
| Details | Domain: {"description":"HTH La-type RNA-binding","evidences":[{"source":"PROSITE-ProRule","id":"PRU00332","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 76 |
| Details | Domain: {"description":"RRM","evidences":[{"source":"PROSITE-ProRule","id":"PRU00176","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 3 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 3 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"PubMed","id":"19608861","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
