9M4N
Structure of AtCDC48
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000166 | molecular_function | nucleotide binding |
| A | 0005515 | molecular_function | protein binding |
| A | 0005524 | molecular_function | ATP binding |
| A | 0005634 | cellular_component | nucleus |
| A | 0005635 | cellular_component | nuclear envelope |
| A | 0005730 | cellular_component | nucleolus |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0005794 | cellular_component | Golgi apparatus |
| A | 0005811 | cellular_component | lipid droplet |
| A | 0005819 | cellular_component | spindle |
| A | 0005829 | cellular_component | cytosol |
| A | 0005886 | cellular_component | plasma membrane |
| A | 0006511 | biological_process | ubiquitin-dependent protein catabolic process |
| A | 0009505 | cellular_component | plant-type cell wall |
| A | 0009506 | cellular_component | plasmodesma |
| A | 0009524 | cellular_component | phragmoplast |
| A | 0009707 | cellular_component | chloroplast outer membrane |
| A | 0009846 | biological_process | pollen germination |
| A | 0009860 | biological_process | pollen tube growth |
| A | 0010498 | biological_process | proteasomal protein catabolic process |
| A | 0015031 | biological_process | protein transport |
| A | 0016887 | molecular_function | ATP hydrolysis activity |
| A | 0022626 | cellular_component | cytosolic ribosome |
| A | 0030162 | biological_process | regulation of proteolysis |
| A | 0030970 | biological_process | retrograde protein transport, ER to cytosol |
| A | 0031348 | biological_process | negative regulation of defense response |
| A | 0031593 | molecular_function | polyubiquitin modification-dependent protein binding |
| A | 0031648 | biological_process | protein destabilization |
| A | 0031969 | cellular_component | chloroplast membrane |
| A | 0031981 | cellular_component | nuclear lumen |
| A | 0032991 | cellular_component | protein-containing complex |
| A | 0034098 | cellular_component | VCP-NPL4-UFD1 AAA ATPase complex |
| A | 0034614 | biological_process | cellular response to reactive oxygen species |
| A | 0042802 | molecular_function | identical protein binding |
| A | 0043161 | biological_process | proteasome-mediated ubiquitin-dependent protein catabolic process |
| A | 0051228 | biological_process | mitotic spindle disassembly |
| A | 0051301 | biological_process | cell division |
| A | 0097352 | biological_process | autophagosome maturation |
| A | 1902882 | biological_process | regulation of response to oxidative stress |
Functional Information from PROSITE/UniProt
| site_id | PS00674 |
| Number of Residues | 19 |
| Details | AAA AAA-protein family signature. ViVMgATNrpnsIDpALr.R |
| Chain | Residue | Details |
| A | VAL344-ARG362 | |
| A | VAL621-ARG639 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 10 |
| Details | Binding site: {"evidences":[{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"submission","publicationDate":"AUG-2018","submissionDatabase":"PDB data bank","title":"Common mode of remodeling AAA ATPases p97/CDC48 by their disassembly cofactors ASPL/PUX1.","authors":["Heinemann U.","Roske Y.","Banchenko S.","Arumughan A.","Wanker E.","Petrovic S."]}},{"source":"PDB","id":"6HD3","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 8 |
| Details | Binding site: {"evidences":[{"evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"17693538","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
