9I5X

Porphyromonas gingivalis 70S ribosome (W83 Strain)

This is a non-PDB format compatible entry.

Functional Information from GO Data

Chain	GOid	namespace	contents
0	0003735	molecular_function	structural constituent of ribosome
0	0005840	cellular_component	ribosome
0	0006412	biological_process	translation
0	1990904	cellular_component	ribonucleoprotein complex
1	0005840	cellular_component	ribosome
1	0006412	biological_process	translation
1	1990904	cellular_component	ribonucleoprotein complex
10	0046872	molecular_function	metal ion binding
2	0005840	cellular_component	ribosome
2	0006412	biological_process	translation
2	0022625	cellular_component	cytosolic large ribosomal subunit
2	1990904	cellular_component	ribonucleoprotein complex
4	0005840	cellular_component	ribosome
4	0006412	biological_process	translation
4	1990904	cellular_component	ribonucleoprotein complex
5	0005737	cellular_component	cytoplasm
5	0005840	cellular_component	ribosome
5	0006412	biological_process	translation
5	1990904	cellular_component	ribonucleoprotein complex
6	0005840	cellular_component	ribosome
6	0006412	biological_process	translation
6	1990904	cellular_component	ribonucleoprotein complex
7	0003735	molecular_function	structural constituent of ribosome
7	0005840	cellular_component	ribosome
7	0006412	biological_process	translation
7	0015934	cellular_component	large ribosomal subunit
7	0022625	cellular_component	cytosolic large ribosomal subunit
7	1990904	cellular_component	ribonucleoprotein complex
8	0005840	cellular_component	ribosome
8	0006412	biological_process	translation
8	1990904	cellular_component	ribonucleoprotein complex
b	0003723	molecular_function	RNA binding
b	0003735	molecular_function	structural constituent of ribosome
b	0005737	cellular_component	cytoplasm
b	0005840	cellular_component	ribosome
b	0006412	biological_process	translation
b	0019843	molecular_function	rRNA binding
b	0070181	molecular_function	small ribosomal subunit rRNA binding
b	1990904	cellular_component	ribonucleoprotein complex
c	0003735	molecular_function	structural constituent of ribosome
c	0005737	cellular_component	cytoplasm
c	0005840	cellular_component	ribosome
c	0006412	biological_process	translation
c	0015935	cellular_component	small ribosomal subunit
c	1990904	cellular_component	ribonucleoprotein complex
d	0003723	molecular_function	RNA binding
d	0005829	cellular_component	cytosol
d	0005840	cellular_component	ribosome
d	0006412	biological_process	translation
d	0015935	cellular_component	small ribosomal subunit
d	0019843	molecular_function	rRNA binding
d	0070181	molecular_function	small ribosomal subunit rRNA binding
d	1990904	cellular_component	ribonucleoprotein complex
D	0002181	biological_process	cytoplasmic translation
D	0003723	molecular_function	RNA binding
D	0003735	molecular_function	structural constituent of ribosome
D	0005840	cellular_component	ribosome
D	0006412	biological_process	translation
D	0015934	cellular_component	large ribosomal subunit
D	0019843	molecular_function	rRNA binding
D	1990904	cellular_component	ribonucleoprotein complex
e	0003723	molecular_function	RNA binding
e	0003735	molecular_function	structural constituent of ribosome
e	0005840	cellular_component	ribosome
e	0006412	biological_process	translation
e	0019843	molecular_function	rRNA binding
e	0022627	cellular_component	cytosolic small ribosomal subunit
e	1990904	cellular_component	ribonucleoprotein complex
E	0003723	molecular_function	RNA binding
E	0003735	molecular_function	structural constituent of ribosome
E	0005840	cellular_component	ribosome
E	0006412	biological_process	translation
E	0019843	molecular_function	rRNA binding
E	0022625	cellular_component	cytosolic large ribosomal subunit
E	1990904	cellular_component	ribonucleoprotein complex
f	0003723	molecular_function	RNA binding
f	0005737	cellular_component	cytoplasm
f	0005840	cellular_component	ribosome
f	0006412	biological_process	translation
f	0019843	molecular_function	rRNA binding
f	0022627	cellular_component	cytosolic small ribosomal subunit
f	1990904	cellular_component	ribonucleoprotein complex
F	0003723	molecular_function	RNA binding
F	0003735	molecular_function	structural constituent of ribosome
F	0005840	cellular_component	ribosome
F	0006412	biological_process	translation
F	0019843	molecular_function	rRNA binding
F	1990904	cellular_component	ribonucleoprotein complex
g	0003723	molecular_function	RNA binding
g	0003735	molecular_function	structural constituent of ribosome
g	0005737	cellular_component	cytoplasm
g	0005840	cellular_component	ribosome
g	0006412	biological_process	translation
g	0015935	cellular_component	small ribosomal subunit
g	0019843	molecular_function	rRNA binding
g	1990904	cellular_component	ribonucleoprotein complex
h	0003723	molecular_function	RNA binding
h	0005840	cellular_component	ribosome
h	0006412	biological_process	translation
h	0019843	molecular_function	rRNA binding
h	1990904	cellular_component	ribonucleoprotein complex
i	0000049	molecular_function	tRNA binding
i	0003723	molecular_function	RNA binding
i	0005829	cellular_component	cytosol
i	0005840	cellular_component	ribosome
i	0006412	biological_process	translation
i	0015935	cellular_component	small ribosomal subunit
i	0019843	molecular_function	rRNA binding
i	1990904	cellular_component	ribonucleoprotein complex
I	0003723	molecular_function	RNA binding
I	0003735	molecular_function	structural constituent of ribosome
I	0005840	cellular_component	ribosome
I	0006412	biological_process	translation
I	0019843	molecular_function	rRNA binding
I	0022627	cellular_component	cytosolic small ribosomal subunit
I	0070181	molecular_function	small ribosomal subunit rRNA binding
I	1990904	cellular_component	ribonucleoprotein complex
j	0000049	molecular_function	tRNA binding
j	0003723	molecular_function	RNA binding
j	0005840	cellular_component	ribosome
j	0006412	biological_process	translation
j	0019843	molecular_function	rRNA binding
j	1990904	cellular_component	ribonucleoprotein complex
J	0003723	molecular_function	RNA binding
J	0003735	molecular_function	structural constituent of ribosome
J	0005737	cellular_component	cytoplasm
J	0005840	cellular_component	ribosome
J	0006412	biological_process	translation
J	0015935	cellular_component	small ribosomal subunit
J	0022627	cellular_component	cytosolic small ribosomal subunit
J	1990904	cellular_component	ribonucleoprotein complex
k	0003723	molecular_function	RNA binding
k	0003729	molecular_function	mRNA binding
k	0003735	molecular_function	structural constituent of ribosome
k	0005840	cellular_component	ribosome
k	0006412	biological_process	translation
k	0019843	molecular_function	rRNA binding
k	0022627	cellular_component	cytosolic small ribosomal subunit
k	1990904	cellular_component	ribonucleoprotein complex
K	0000049	molecular_function	tRNA binding
K	0005840	cellular_component	ribosome
K	0006412	biological_process	translation
K	1990904	cellular_component	ribonucleoprotein complex
l	0003723	molecular_function	RNA binding
l	0003735	molecular_function	structural constituent of ribosome
l	0005840	cellular_component	ribosome
l	0006412	biological_process	translation
l	0015935	cellular_component	small ribosomal subunit
l	0019843	molecular_function	rRNA binding
l	0042274	biological_process	ribosomal small subunit biogenesis
l	1990904	cellular_component	ribonucleoprotein complex
L	0003723	molecular_function	RNA binding
L	0005840	cellular_component	ribosome
L	0006412	biological_process	translation
L	0019843	molecular_function	rRNA binding
L	1990904	cellular_component	ribonucleoprotein complex
m	0000049	molecular_function	tRNA binding
m	0003723	molecular_function	RNA binding
m	0005840	cellular_component	ribosome
m	0006412	biological_process	translation
m	0019843	molecular_function	rRNA binding
m	1990904	cellular_component	ribonucleoprotein complex
M	0003729	molecular_function	mRNA binding
M	0003735	molecular_function	structural constituent of ribosome
M	0005840	cellular_component	ribosome
M	0006412	biological_process	translation
M	0017148	biological_process	negative regulation of translation
M	0022625	cellular_component	cytosolic large ribosomal subunit
M	1990904	cellular_component	ribonucleoprotein complex
n	0003723	molecular_function	RNA binding
n	0005737	cellular_component	cytoplasm
n	0005840	cellular_component	ribosome
n	0006412	biological_process	translation
n	0019843	molecular_function	rRNA binding
n	0042254	biological_process	ribosome biogenesis
n	1990904	cellular_component	ribonucleoprotein complex
N	0003723	molecular_function	RNA binding
N	0003735	molecular_function	structural constituent of ribosome
N	0005840	cellular_component	ribosome
N	0006412	biological_process	translation
N	0019843	molecular_function	rRNA binding
N	0022625	cellular_component	cytosolic large ribosomal subunit
N	0070180	molecular_function	large ribosomal subunit rRNA binding
N	1990904	cellular_component	ribonucleoprotein complex
o	0003723	molecular_function	RNA binding
o	0005737	cellular_component	cytoplasm
o	0005840	cellular_component	ribosome
o	0006412	biological_process	translation
o	0019843	molecular_function	rRNA binding
o	1990904	cellular_component	ribonucleoprotein complex
O	0003723	molecular_function	RNA binding
O	0003735	molecular_function	structural constituent of ribosome
O	0005840	cellular_component	ribosome
O	0006412	biological_process	translation
O	0019843	molecular_function	rRNA binding
O	0022625	cellular_component	cytosolic large ribosomal subunit
O	1990904	cellular_component	ribonucleoprotein complex
p	0000028	biological_process	ribosomal small subunit assembly
p	0003723	molecular_function	RNA binding
p	0003735	molecular_function	structural constituent of ribosome
p	0005737	cellular_component	cytoplasm
p	0005840	cellular_component	ribosome
p	0006412	biological_process	translation
p	0019843	molecular_function	rRNA binding
p	1990904	cellular_component	ribonucleoprotein complex
P	0000049	molecular_function	tRNA binding
P	0003723	molecular_function	RNA binding
P	0003735	molecular_function	structural constituent of ribosome
P	0005840	cellular_component	ribosome
P	0006412	biological_process	translation
P	0019843	molecular_function	rRNA binding
P	0022625	cellular_component	cytosolic large ribosomal subunit
P	1990904	cellular_component	ribonucleoprotein complex
Q	0003735	molecular_function	structural constituent of ribosome
Q	0005840	cellular_component	ribosome
Q	0006412	biological_process	translation
Q	0015934	cellular_component	large ribosomal subunit
Q	0022625	cellular_component	cytosolic large ribosomal subunit
Q	1990904	cellular_component	ribonucleoprotein complex
R	0003723	molecular_function	RNA binding
R	0005737	cellular_component	cytoplasm
R	0005840	cellular_component	ribosome
R	0006412	biological_process	translation
R	0008097	molecular_function	5S rRNA binding
R	0019843	molecular_function	rRNA binding
R	0022625	cellular_component	cytosolic large ribosomal subunit
R	1990904	cellular_component	ribonucleoprotein complex
S	0003735	molecular_function	structural constituent of ribosome
S	0005840	cellular_component	ribosome
S	0006412	biological_process	translation
S	0022625	cellular_component	cytosolic large ribosomal subunit
S	1990904	cellular_component	ribonucleoprotein complex
T	0000027	biological_process	ribosomal large subunit assembly
T	0003723	molecular_function	RNA binding
T	0005840	cellular_component	ribosome
T	0019843	molecular_function	rRNA binding
T	1990904	cellular_component	ribonucleoprotein complex
U	0003723	molecular_function	RNA binding
U	0003735	molecular_function	structural constituent of ribosome
U	0005737	cellular_component	cytoplasm
U	0005840	cellular_component	ribosome
U	0006412	biological_process	translation
U	0019843	molecular_function	rRNA binding
U	1990904	cellular_component	ribonucleoprotein complex
V	0003723	molecular_function	RNA binding
V	0003735	molecular_function	structural constituent of ribosome
V	0005840	cellular_component	ribosome
V	0006412	biological_process	translation
V	0015934	cellular_component	large ribosomal subunit
V	0019843	molecular_function	rRNA binding
V	0022625	cellular_component	cytosolic large ribosomal subunit
V	1990904	cellular_component	ribonucleoprotein complex
W	0003723	molecular_function	RNA binding
W	0003735	molecular_function	structural constituent of ribosome
W	0005840	cellular_component	ribosome
W	0006412	biological_process	translation
W	0019843	molecular_function	rRNA binding
W	1990904	cellular_component	ribonucleoprotein complex
X	0003723	molecular_function	RNA binding
X	0005840	cellular_component	ribosome
X	0006412	biological_process	translation
X	0019843	molecular_function	rRNA binding
X	1990904	cellular_component	ribonucleoprotein complex
Y	0003723	molecular_function	RNA binding
Y	0005840	cellular_component	ribosome
Y	0006412	biological_process	translation
Y	0008097	molecular_function	5S rRNA binding
Y	0019843	molecular_function	rRNA binding
Y	0022625	cellular_component	cytosolic large ribosomal subunit
Y	1990904	cellular_component	ribonucleoprotein complex
Z	0003735	molecular_function	structural constituent of ribosome
Z	0005840	cellular_component	ribosome
Z	0006412	biological_process	translation
Z	0022625	cellular_component	cytosolic large ribosomal subunit
Z	1990904	cellular_component	ribonucleoprotein complex

Functional Information from PROSITE/UniProt

site_id	PS00049
Number of Residues	27
Details	RIBOSOMAL_L14 Ribosomal protein L14 signature. AVIVrtkkevrrp.DGsyirFddNacVL

Chain	Residue	Details
N	ALA60-LEU86

---

site_id	PS00050
Number of Residues	16
Details	RIBOSOMAL_L23 Ribosomal protein L23 signature. KKAIVTLKkgetidfF

Chain	Residue	Details
W	LYS79-PHE94

---

site_id	PS00053
Number of Residues	18
Details	RIBOSOMAL_S8 Ribosomal protein S8 signature. GiaIVSTPrGVMtdkeAR

Chain	Residue	Details
o	GLY101-ARG118

---

site_id	PS00054
Number of Residues	23
Details	RIBOSOMAL_S11 Ribosomal protein S11 signature. IrTIhgA.GIeVmeiiDvTPmPHN

Chain	Residue	Details
L	ILE96-ASN118

---

site_id	PS00055
Number of Residues	8
Details	RIBOSOMAL_S12 Ribosomal protein S12 signature. KkPNSAmR

Chain	Residue	Details
j	LYS43-ARG50

---

site_id	PS00056
Number of Residues	13
Details	RIBOSOMAL_S17 Ribosomal protein S17 signature. GDtVrImEtRPLS

Chain	Residue	Details
e	GLY57-SER69

---

site_id	PS00057
Number of Residues	24
Details	RIBOSOMAL_S18 Ribosomal protein S18 signature. IDYkd.PefLkkFLNEq.GKIlprRI

Chain	Residue	Details
I	ILE35-ILE58

---

site_id	PS00323
Number of Residues	25
Details	RIBOSOMAL_S19 Ribosomal protein S19 signature. NGNkfipvfVtenmVGhkLGEFspT

Chain	Residue	Details
p	ASN53-THR77

---

site_id	PS00360
Number of Residues	19
Details	RIBOSOMAL_S9 Ribosomal protein S9 signature. GGGfkGQseAarlAiARAL

Chain	Residue	Details
J	GLY67-LEU85

---

site_id	PS00361
Number of Residues	16
Details	RIBOSOMAL_S10 Ribosomal protein S10 signature. VkaaGAmvsGPIpLPT

Chain	Residue	Details
K	VAL28-THR43

---

site_id	PS00362
Number of Residues	31
Details	RIBOSOMAL_S15 Ribosomal protein S15 signature. LteHLrqnKkDfaTersLkmLvgkrrrMldY

Chain	Residue	Details
f	LEU39-TYR69

---

site_id	PS00467
Number of Residues	12
Details	RIBOSOMAL_L2 Ribosomal protein L2 signature. PhnRGVVmNPvD

Chain	Residue	Details
D	PRO218-ASP229

---

site_id	PS00474
Number of Residues	24
Details	RIBOSOMAL_L3 Ribosomal protein L3 signature. FsdadfvDvvGtSkGKGfqGvvkR

Chain	Residue	Details
E	PHE100-ARG123

---

site_id	PS00475
Number of Residues	31
Details	RIBOSOMAL_L15 Ribosomal protein L15 signature. KILAnGtVtta..LtVeahaFSktAeeaIvraG

Chain	Residue	Details
O	LYS112-GLY142

---

site_id	PS00527
Number of Residues	23
Details	RIBOSOMAL_S14 Ribosomal protein S14 signature. R.CsmtgrpkgymrqFGISRiQFR

Chain	Residue	Details
g	ARG51-ARG73

---

site_id	PS00548
Number of Residues	35
Details	RIBOSOMAL_S3 Ribosomal protein S3 signature. ARsemfkeGrTplHt..LradIDyalaealTkvGllG

Chain	Residue	Details
k	ALA162-GLY196

---

site_id	PS00585
Number of Residues	33
Details	RIBOSOMAL_S5 Ribosomal protein S5 signature. GRtftFaAivVVGNed.GvIGwGlgkag.EVpa.AI

Chain	Residue	Details
n	GLY33-ILE65

---

site_id	PS00632
Number of Residues	25
Details	RIBOSOMAL_S4 Ribosomal protein S4 signature. LEaRLdnvVFRlgiApTrsaARqLV

Chain	Residue	Details
l	LEU90-VAL114

---

site_id	PS00634
Number of Residues	33
Details	RIBOSOMAL_L30 Ribosomal protein L30 signature. TLdaLgLrKlnQiVeheatpsilgMVnkVrhLV

Chain	Residue	Details
2	THR22-VAL54

---

site_id	PS00646
Number of Residues	14
Details	RIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGiRHriGlpLRGQ

Chain	Residue	Details
i	ARG89-GLN102

---

site_id	PS00701
Number of Residues	12
Details	RIBOSOMAL_L16_2 Ribosomal protein L16 signature 2. RMGkGKGapegF

Chain	Residue	Details
P	ARG82-PHE93

---

site_id	PS00783
Number of Residues	23
Details	RIBOSOMAL_L13 Ribosomal protein L13 signature. VKGMLPknrl.GAkiignLyVYaG

Chain	Residue	Details
M	VAL110-GLY132

---

site_id	PS00784
Number of Residues	20
Details	RIBOSOMAL_L34 Ribosomal protein L34 signature. KRTYQpsnrkRlnkh.GFrsR

Chain	Residue	Details
6	LYS2-ARG21

---

site_id	PS00831
Number of Residues	15
Details	RIBOSOMAL_L27 Ribosomal protein L27 signature. GnILvRQRGtvhhpG

Chain	Residue	Details
Z	GLY34-GLY48

---

site_id	PS00936
Number of Residues	27
Details	RIBOSOMAL_L35 Ribosomal protein L35 signature. KTNsGAkKRFaltgtgkikrkhafk.SH

Chain	Residue	Details
7	LYS5-HIS31

---

site_id	PS00937
Number of Residues	17
Details	RIBOSOMAL_L20 Ribosomal protein L20 signature. KrnfRaLWIQRINaaaR

Chain	Residue	Details
T	LYS54-ARG70

---

site_id	PS01015
Number of Residues	16
Details	RIBOSOMAL_L19 Ribosomal protein L19 signature. VeKyGKVR.RAKLYYLR

Chain	Residue	Details
S	VAL86-ARG101

---

site_id	PS01108
Number of Residues	18
Details	RIBOSOMAL_L24 Ribosomal protein L24 signature. GDtVmVIsGedKGhs.GrV

Chain	Residue	Details
X	GLY9-VAL26

---

site_id	PS01167
Number of Residues	23
Details	RIBOSOMAL_L17 Ribosomal protein L17 signature. IfTTvaKaKalriyvEpLLTkTK

Chain	Residue	Details
Q	ILE34-LYS56

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	13
Details	Compositional bias: {"description":"Basic residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	85
Details	Region: {"description":"Disordered","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	10
Details	Compositional bias: {"description":"Gly residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI4
Number of Residues	10
Details	Compositional bias: {"description":"Basic and acidic residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI5
Number of Residues	1
Details	Modified residue: {"description":"3-methylthioaspartic acid","evidences":[{"evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI6
Number of Residues	62
Details	Domain: {"description":"S4 RNA-binding","evidences":[{"source":"HAMAP-Rule","id":"MF_01306","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI7
Number of Residues	63
Details	Domain: {"description":"S5 DRBM","evidences":[{"source":"HAMAP-Rule","id":"MF_01307","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---