9I05

Cryo-EM structure of the large subunit of the mitochondrial ribosome from Toxoplasma gondii

This is a non-PDB format compatible entry.

Functional Information from GO Data

Chain	GOid	namespace	contents
Aa	0003723	molecular_function	RNA binding
Aa	0003735	molecular_function	structural constituent of ribosome
Aa	0005762	cellular_component	mitochondrial large ribosomal subunit
Aa	0005840	cellular_component	ribosome
Aa	0006412	biological_process	translation
Aa	0015934	cellular_component	large ribosomal subunit
Aa	0016740	molecular_function	transferase activity
Aa	0032543	biological_process	mitochondrial translation
Aa	1990904	cellular_component	ribonucleoprotein complex
AA	0003735	molecular_function	structural constituent of ribosome
AA	0005739	cellular_component	mitochondrion
AA	0005762	cellular_component	mitochondrial large ribosomal subunit
AA	0005840	cellular_component	ribosome
AA	0006412	biological_process	translation
AA	1990904	cellular_component	ribonucleoprotein complex
Ab	0003735	molecular_function	structural constituent of ribosome
Ab	0005762	cellular_component	mitochondrial large ribosomal subunit
Ab	0005840	cellular_component	ribosome
Ab	0006412	biological_process	translation
Ab	1990904	cellular_component	ribonucleoprotein complex
AB	0003735	molecular_function	structural constituent of ribosome
AB	0005739	cellular_component	mitochondrion
AB	0005762	cellular_component	mitochondrial large ribosomal subunit
AB	0005840	cellular_component	ribosome
AB	0032543	biological_process	mitochondrial translation
AB	1990904	cellular_component	ribonucleoprotein complex
Ac	0003735	molecular_function	structural constituent of ribosome
Ac	0005840	cellular_component	ribosome
Ac	0006412	biological_process	translation
Ac	1990904	cellular_component	ribonucleoprotein complex
AC	0003735	molecular_function	structural constituent of ribosome
AC	0005762	cellular_component	mitochondrial large ribosomal subunit
AD	0003735	molecular_function	structural constituent of ribosome
AD	0005739	cellular_component	mitochondrion
AD	0005762	cellular_component	mitochondrial large ribosomal subunit
AD	0005840	cellular_component	ribosome
AD	0006412	biological_process	translation
AD	1990904	cellular_component	ribonucleoprotein complex
Ae	0003735	molecular_function	structural constituent of ribosome
Ae	0005840	cellular_component	ribosome
Ae	0006412	biological_process	translation
Ae	1990904	cellular_component	ribonucleoprotein complex
Af	0003723	molecular_function	RNA binding
Af	0003735	molecular_function	structural constituent of ribosome
Af	0005762	cellular_component	mitochondrial large ribosomal subunit
Af	0005840	cellular_component	ribosome
Af	0006412	biological_process	translation
Af	0015934	cellular_component	large ribosomal subunit
Af	0019843	molecular_function	rRNA binding
Af	0070180	molecular_function	large ribosomal subunit rRNA binding
Af	1990904	cellular_component	ribonucleoprotein complex
AF	0003735	molecular_function	structural constituent of ribosome
AF	0005739	cellular_component	mitochondrion
AF	0005762	cellular_component	mitochondrial large ribosomal subunit
AF	0005840	cellular_component	ribosome
AF	1990904	cellular_component	ribonucleoprotein complex
Ag	0003729	molecular_function	mRNA binding
Ag	0003735	molecular_function	structural constituent of ribosome
Ag	0005762	cellular_component	mitochondrial large ribosomal subunit
Ag	0005840	cellular_component	ribosome
Ag	0006412	biological_process	translation
Ag	0017148	biological_process	negative regulation of translation
Ag	1990904	cellular_component	ribonucleoprotein complex
Ah	0003735	molecular_function	structural constituent of ribosome
Ah	0005840	cellular_component	ribosome
Ah	0006412	biological_process	translation
Ai	0003735	molecular_function	structural constituent of ribosome
Ai	0005762	cellular_component	mitochondrial large ribosomal subunit
Ai	0005840	cellular_component	ribosome
Ai	0006412	biological_process	translation
Ai	0015934	cellular_component	large ribosomal subunit
Ai	1990904	cellular_component	ribonucleoprotein complex
Aj	0003735	molecular_function	structural constituent of ribosome
Aj	0005762	cellular_component	mitochondrial large ribosomal subunit
Aj	0005840	cellular_component	ribosome
Aj	0006412	biological_process	translation
Aj	0019843	molecular_function	rRNA binding
Aj	0032543	biological_process	mitochondrial translation
Aj	1990904	cellular_component	ribonucleoprotein complex
Ak	0003735	molecular_function	structural constituent of ribosome
Ak	0005840	cellular_component	ribosome
Ak	0006412	biological_process	translation
Ak	0015934	cellular_component	large ribosomal subunit
Ak	0022625	cellular_component	cytosolic large ribosomal subunit
Ak	1990904	cellular_component	ribonucleoprotein complex
Al	0003735	molecular_function	structural constituent of ribosome
Al	0005762	cellular_component	mitochondrial large ribosomal subunit
Al	0005840	cellular_component	ribosome
Al	0006412	biological_process	translation
Al	1990904	cellular_component	ribonucleoprotein complex
Am	0003735	molecular_function	structural constituent of ribosome
Am	0005840	cellular_component	ribosome
Am	0006412	biological_process	translation
Am	0019843	molecular_function	rRNA binding
Am	1990904	cellular_component	ribonucleoprotein complex
An	0003735	molecular_function	structural constituent of ribosome
An	0005737	cellular_component	cytoplasm
An	0005762	cellular_component	mitochondrial large ribosomal subunit
An	0005840	cellular_component	ribosome
Ao	0003735	molecular_function	structural constituent of ribosome
Ao	0005840	cellular_component	ribosome
Ao	0006412	biological_process	translation
Ap	0003735	molecular_function	structural constituent of ribosome
Ap	0005762	cellular_component	mitochondrial large ribosomal subunit
Ap	0005840	cellular_component	ribosome
Ap	0006412	biological_process	translation
Ap	0032543	biological_process	mitochondrial translation
Ap	1990904	cellular_component	ribonucleoprotein complex
Aq	0003723	molecular_function	RNA binding
Aq	0003735	molecular_function	structural constituent of ribosome
Aq	0005840	cellular_component	ribosome
Aq	0006412	biological_process	translation
Aq	1990904	cellular_component	ribonucleoprotein complex
Ar	0003735	molecular_function	structural constituent of ribosome
Ar	0005840	cellular_component	ribosome
Ar	0006412	biological_process	translation
Ar	0008097	molecular_function	5S rRNA binding
Ar	0022625	cellular_component	cytosolic large ribosomal subunit
At	0003735	molecular_function	structural constituent of ribosome
At	0005762	cellular_component	mitochondrial large ribosomal subunit
At	0005840	cellular_component	ribosome
At	1990904	cellular_component	ribonucleoprotein complex
Au	0003735	molecular_function	structural constituent of ribosome
Au	0005739	cellular_component	mitochondrion
Au	0005761	cellular_component	mitochondrial ribosome
Au	0005762	cellular_component	mitochondrial large ribosomal subunit
Au	0005840	cellular_component	ribosome
Au	0006412	biological_process	translation
Au	0032543	biological_process	mitochondrial translation
Au	1990904	cellular_component	ribonucleoprotein complex
Aw	0003735	molecular_function	structural constituent of ribosome
Aw	0005737	cellular_component	cytoplasm
Aw	0005840	cellular_component	ribosome
Aw	0006412	biological_process	translation
Aw	0015934	cellular_component	large ribosomal subunit
Aw	1990904	cellular_component	ribonucleoprotein complex
Ay	0046872	molecular_function	metal ion binding
Xb	0003676	molecular_function	nucleic acid binding
Xb	0003723	molecular_function	RNA binding
Xe	0003723	molecular_function	RNA binding
Xe	0003735	molecular_function	structural constituent of ribosome
Xe	0005840	cellular_component	ribosome
Xe	0006412	biological_process	translation
Xe	1990904	cellular_component	ribonucleoprotein complex
XH	0005840	cellular_component	ribosome
Xk	0003676	molecular_function	nucleic acid binding
Xk	0003723	molecular_function	RNA binding
Xl	0000963	biological_process	mitochondrial RNA processing
Xl	0003723	molecular_function	RNA binding
Xl	0005759	cellular_component	mitochondrial matrix
Xl	0035770	cellular_component	ribonucleoprotein granule
Xl	0044528	biological_process	regulation of mitochondrial mRNA stability
Xp	0000413	biological_process	protein peptidyl-prolyl isomerization
Xp	0003755	molecular_function	peptidyl-prolyl cis-trans isomerase activity
Xp	0005737	cellular_component	cytoplasm
Xp	0006457	biological_process	protein folding
Xp	0016018	molecular_function	cyclosporin A binding
Xp	0016853	molecular_function	isomerase activity
Xv	0000963	biological_process	mitochondrial RNA processing
Xv	0003723	molecular_function	RNA binding
Xv	0005759	cellular_component	mitochondrial matrix
Xv	0035770	cellular_component	ribonucleoprotein granule
Xv	0044528	biological_process	regulation of mitochondrial mRNA stability
Xz	0003677	molecular_function	DNA binding
Xz	0003700	molecular_function	DNA-binding transcription factor activity
Xz	0005634	cellular_component	nucleus
Xz	0006351	biological_process	DNA-templated transcription
Xz	0006355	biological_process	regulation of DNA-templated transcription

Functional Information from PROSITE/UniProt

site_id	PS00049
Number of Residues	27
Details	RIBOSOMAL_L14 Ribosomal protein L14 signature. GVIVrrrketrrk.DGsyikFdeNafVI

Chain	Residue	Details
Ah	GLY65-ILE91

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site_id	PS00170
Number of Residues	18
Details	CSA_PPIASE_1 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. YksTpFHRIVpgFMcQGG

Chain	Residue	Details
Xp	TYR108-GLY125

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site_id	PS00290
Number of Residues	7
Details	IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. FVCSASH

Chain	Residue	Details
Xm	PHE-72-HIS-66

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site_id	PS01319
Number of Residues	23
Details	RBFA Ribosome-binding factor A signature. FAFsLqsflrrVFsIPSVsFatD

Chain	Residue	Details
AC	PHE5-ASP27

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