Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9HDR

Human LINE-1 ORF2p target-primed reverse transcription complex with EN domain resolved

Functional Information from GO Data
ChainGOidnamespacecontents
A0000794cellular_componentcondensed nuclear chromosome
A0003723molecular_functionRNA binding
A0003824molecular_functioncatalytic activity
A0003964molecular_functionRNA-directed DNA polymerase activity
A0004518molecular_functionnuclease activity
A0004519molecular_functionendonuclease activity
A0005515molecular_functionprotein binding
A0005634cellular_componentnucleus
A0005940cellular_componentseptin ring
A0006278biological_processRNA-templated DNA biosynthetic process
A0006310biological_processDNA recombination
A0006974biological_processDNA damage response
A0008643biological_processcarbohydrate transport
A0009036molecular_functiontype II site-specific deoxyribonuclease activity
A0015768biological_processmaltose transport
A0016020cellular_componentmembrane
A0016740molecular_functiontransferase activity
A0016779molecular_functionnucleotidyltransferase activity
A0016787molecular_functionhydrolase activity
A0016925biological_processprotein sumoylation
A0030288cellular_componentouter membrane-bounded periplasmic space
A0031386molecular_functionprotein tag activity
A0032197biological_processretrotransposition
A0034061molecular_functionDNA polymerase activity
A0034219biological_processcarbohydrate transmembrane transport
A0034289biological_processdetection of maltose stimulus
A0042597cellular_componentperiplasmic space
A0042802molecular_functionidentical protein binding
A0042956biological_processmaltodextrin transmembrane transport
A0043190cellular_componentATP-binding cassette (ABC) transporter complex
A0044389molecular_functionubiquitin-like protein ligase binding
A0046872molecular_functionmetal ion binding
A0055052cellular_componentATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing
A0060326biological_processcell chemotaxis
A0071897biological_processDNA biosynthetic process
A0090304biological_processnucleic acid metabolic process
A1901982molecular_functionmaltose binding
A1990060cellular_componentmaltose transport complex
Functional Information from PROSITE/UniProt
site_idPS01037
Number of Residues18
DetailsSBP_BACTERIAL_1 Bacterial extracellular solute-binding proteins, family 1 signature. PIAvEalSLIYNkdlLpN
ChainResidueDetails
APRO-372-ASN-355

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:17287358, ECO:0007744|PubMed:17330950
ChainResidueDetails
ASER-96

site_idSWS_FT_FI2
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:17287358
ChainResidueDetails
ASER-94

site_idSWS_FT_FI3
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins)
ChainResidueDetails
AGLY0

site_idSWS_FT_FI4
Number of Residues1
DetailsACT_SITE: ACT_SITE => ECO:0000250|UniProtKB:P27695
ChainResidueDetails
ATYR115

site_idSWS_FT_FI5
Number of Residues1
DetailsACT_SITE: Proton donor/acceptor => ECO:0000250|UniProtKB:P27695
ChainResidueDetails
AASP145

site_idSWS_FT_FI6
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:17626046, ECO:0000269|PubMed:34554261, ECO:0007744|PDB:2V0S, ECO:0007744|PDB:7N8K
ChainResidueDetails
AGLU43

site_idSWS_FT_FI7
Number of Residues3
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00405
ChainResidueDetails
AASP600
AASP702
AASP703

237423

PDB entries from 2025-06-11

PDB statisticsPDBj update infoContact PDBjnumon