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9H6I

Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs, mRNA, and thermospermine

This is a non-PDB format compatible entry.
Functional Information from GO Data
ChainGOidnamespacecontents
Aa0002181biological_processcytoplasmic translation
Aa0003729molecular_functionmRNA binding
Aa0003735molecular_functionstructural constituent of ribosome
Aa0005515molecular_functionprotein binding
Aa0005730cellular_componentnucleolus
Aa0005737cellular_componentcytoplasm
Aa0005794cellular_componentGolgi apparatus
Aa0009505cellular_componentplant-type cell wall
Aa0009506cellular_componentplasmodesma
Aa0009507cellular_componentchloroplast
Aa0022626cellular_componentcytosolic ribosome
Aa0022627cellular_componentcytosolic small ribosomal subunit
AA0000325cellular_componentplant-type vacuole
AA0003729molecular_functionmRNA binding
AA0003735molecular_functionstructural constituent of ribosome
AA0005634cellular_componentnucleus
AA0005777cellular_componentperoxisome
AA0005794cellular_componentGolgi apparatus
AA0009506cellular_componentplasmodesma
AA0009507cellular_componentchloroplast
AA0022626cellular_componentcytosolic ribosome
AA0022627cellular_componentcytosolic small ribosomal subunit
AB0003729molecular_functionmRNA binding
AB0003735molecular_functionstructural constituent of ribosome
AB0005515molecular_functionprotein binding
AB0005794cellular_componentGolgi apparatus
AB0009506cellular_componentplasmodesma
AB0009507cellular_componentchloroplast
AB0009536cellular_componentplastid
AB0019843molecular_functionrRNA binding
AB0022627cellular_componentcytosolic small ribosomal subunit
AB0042274biological_processribosomal small subunit biogenesis
AC0003729molecular_functionmRNA binding
AC0003735molecular_functionstructural constituent of ribosome
AC0005634cellular_componentnucleus
AC0005794cellular_componentGolgi apparatus
AC0006412biological_processtranslation
AC0008150biological_processbiological_process
AC0009505cellular_componentplant-type cell wall
AC0009506cellular_componentplasmodesma
AC0022627cellular_componentcytosolic small ribosomal subunit
AD0000325cellular_componentplant-type vacuole
AD0003729molecular_functionmRNA binding
AD0003735molecular_functionstructural constituent of ribosome
AD0005737cellular_componentcytoplasm
AD0005829cellular_componentcytosol
AD0005840cellular_componentribosome
AD0006412biological_processtranslation
AD0009505cellular_componentplant-type cell wall
AD0009506cellular_componentplasmodesma
AD0019843molecular_functionrRNA binding
AD0022626cellular_componentcytosolic ribosome
AD0022627cellular_componentcytosolic small ribosomal subunit
AE0000325cellular_componentplant-type vacuole
AE0003674molecular_functionmolecular_function
AE0003735molecular_functionstructural constituent of ribosome
AE0005737cellular_componentcytoplasm
AE0005739cellular_componentmitochondrion
AE0005794cellular_componentGolgi apparatus
AE0005829cellular_componentcytosol
AE0008150biological_processbiological_process
AE0009505cellular_componentplant-type cell wall
AE0009506cellular_componentplasmodesma
AE0009507cellular_componentchloroplast
AE0022626cellular_componentcytosolic ribosome
AE0022627cellular_componentcytosolic small ribosomal subunit
AF0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
AF0003723molecular_functionRNA binding
AF0003729molecular_functionmRNA binding
AF0003735molecular_functionstructural constituent of ribosome
AF0005737cellular_componentcytoplasm
AF0005739cellular_componentmitochondrion
AF0005794cellular_componentGolgi apparatus
AF0009505cellular_componentplant-type cell wall
AF0009506cellular_componentplasmodesma
AF0009507cellular_componentchloroplast
AF0022626cellular_componentcytosolic ribosome
AF0022627cellular_componentcytosolic small ribosomal subunit
AG0000325cellular_componentplant-type vacuole
AG0003723molecular_functionRNA binding
AG0003729molecular_functionmRNA binding
AG0003735molecular_functionstructural constituent of ribosome
AG0005730cellular_componentnucleolus
AG0005737cellular_componentcytoplasm
AG0005794cellular_componentGolgi apparatus
AG0005829cellular_componentcytosol
AG0009505cellular_componentplant-type cell wall
AG0009506cellular_componentplasmodesma
AG0022625cellular_componentcytosolic large ribosomal subunit
AG0022626cellular_componentcytosolic ribosome
AH0000325cellular_componentplant-type vacuole
AH0003723molecular_functionRNA binding
AH0003729molecular_functionmRNA binding
AH0003735molecular_functionstructural constituent of ribosome
AH0005730cellular_componentnucleolus
AH0005737cellular_componentcytoplasm
AH0005773cellular_componentvacuole
AH0005783cellular_componentendoplasmic reticulum
AH0005794cellular_componentGolgi apparatus
AH0005829cellular_componentcytosol
AH0009506cellular_componentplasmodesma
AH0022625cellular_componentcytosolic large ribosomal subunit
AH0022626cellular_componentcytosolic ribosome
AH0042273biological_processribosomal large subunit biogenesis
AI0003723molecular_functionRNA binding
AI0003729molecular_functionmRNA binding
AI0003735molecular_functionstructural constituent of ribosome
AI0005515molecular_functionprotein binding
AI0005737cellular_componentcytoplasm
AI0005829cellular_componentcytosol
AI0022626cellular_componentcytosolic ribosome
AI0022627cellular_componentcytosolic small ribosomal subunit
AJ0002181biological_processcytoplasmic translation
AJ0003729molecular_functionmRNA binding
AJ0003735molecular_functionstructural constituent of ribosome
AJ0005737cellular_componentcytoplasm
AJ0005773cellular_componentvacuole
AJ0005794cellular_componentGolgi apparatus
AJ0009506cellular_componentplasmodesma
AJ0009536cellular_componentplastid
AJ0022625cellular_componentcytosolic large ribosomal subunit
AJ0022626cellular_componentcytosolic ribosome
AK0003723molecular_functionRNA binding
AK0003729molecular_functionmRNA binding
AK0003735molecular_functionstructural constituent of ribosome
AK0005576cellular_componentextracellular region
AK0005730cellular_componentnucleolus
AK0005737cellular_componentcytoplasm
AK0005829cellular_componentcytosol
AK0009506cellular_componentplasmodesma
AK0022625cellular_componentcytosolic large ribosomal subunit
AK0022626cellular_componentcytosolic ribosome
AL0003735molecular_functionstructural constituent of ribosome
AM0003674molecular_functionmolecular_function
AM0003735molecular_functionstructural constituent of ribosome
AM0005576cellular_componentextracellular region
AM0005730cellular_componentnucleolus
AM0005737cellular_componentcytoplasm
AM0022625cellular_componentcytosolic large ribosomal subunit
AM0022626cellular_componentcytosolic ribosome
AN0002181biological_processcytoplasmic translation
AN0003723molecular_functionRNA binding
AN0003729molecular_functionmRNA binding
AN0003735molecular_functionstructural constituent of ribosome
AN0005730cellular_componentnucleolus
AN0005737cellular_componentcytoplasm
AN0005829cellular_componentcytosol
AN0009506cellular_componentplasmodesma
AN0022625cellular_componentcytosolic large ribosomal subunit
AN0022626cellular_componentcytosolic ribosome
AO0002181biological_processcytoplasmic translation
AO0003729molecular_functionmRNA binding
AO0003735molecular_functionstructural constituent of ribosome
AO0005515molecular_functionprotein binding
AO0005634cellular_componentnucleus
AO0005730cellular_componentnucleolus
AO0005737cellular_componentcytoplasm
AO0005783cellular_componentendoplasmic reticulum
AO0022625cellular_componentcytosolic large ribosomal subunit
AP0003729molecular_functionmRNA binding
AP0003735molecular_functionstructural constituent of ribosome
AP0005737cellular_componentcytoplasm
AP0005829cellular_componentcytosol
AP0022625cellular_componentcytosolic large ribosomal subunit
AP0022626cellular_componentcytosolic ribosome
AQ0003729molecular_functionmRNA binding
AQ0003735molecular_functionstructural constituent of ribosome
AQ0005634cellular_componentnucleus
AQ0005654cellular_componentnucleoplasm
AQ0005730cellular_componentnucleolus
AQ0005737cellular_componentcytoplasm
AQ0005739cellular_componentmitochondrion
AQ0005886cellular_componentplasma membrane
AQ0009505cellular_componentplant-type cell wall
AQ0009506cellular_componentplasmodesma
AQ0009507cellular_componentchloroplast
AQ0009955biological_processadaxial/abaxial pattern specification
AQ0009965biological_processleaf morphogenesis
AQ0022625cellular_componentcytosolic large ribosomal subunit
AQ0022626cellular_componentcytosolic ribosome
AT0003723molecular_functionRNA binding
AT0003729molecular_functionmRNA binding
AT0003735molecular_functionstructural constituent of ribosome
AT0005737cellular_componentcytoplasm
AT0005739cellular_componentmitochondrion
AT0005829cellular_componentcytosol
AT0022625cellular_componentcytosolic large ribosomal subunit
AT0022626cellular_componentcytosolic ribosome
AU0002181biological_processcytoplasmic translation
AU0003729molecular_functionmRNA binding
AU0003735molecular_functionstructural constituent of ribosome
AU0005737cellular_componentcytoplasm
AU0022625cellular_componentcytosolic large ribosomal subunit
AV0003729molecular_functionmRNA binding
AV0003735molecular_functionstructural constituent of ribosome
AV0005730cellular_componentnucleolus
AV0005737cellular_componentcytoplasm
AV0005794cellular_componentGolgi apparatus
AV0005829cellular_componentcytosol
AV0022625cellular_componentcytosolic large ribosomal subunit
AV0022626cellular_componentcytosolic ribosome
AW0002181biological_processcytoplasmic translation
AW0003729molecular_functionmRNA binding
AW0003735molecular_functionstructural constituent of ribosome
AW0005737cellular_componentcytoplasm
AW0005739cellular_componentmitochondrion
AW0005829cellular_componentcytosol
AW0022625cellular_componentcytosolic large ribosomal subunit
AW0042273biological_processribosomal large subunit biogenesis
AX0000325cellular_componentplant-type vacuole
AX0002181biological_processcytoplasmic translation
AX0003735molecular_functionstructural constituent of ribosome
AX0005737cellular_componentcytoplasm
AX0005829cellular_componentcytosol
AX0022625cellular_componentcytosolic large ribosomal subunit
AX0022626cellular_componentcytosolic ribosome
AY0000448biological_processcleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
AY0003729molecular_functionmRNA binding
AY0003735molecular_functionstructural constituent of ribosome
AY0005576cellular_componentextracellular region
AY0005737cellular_componentcytoplasm
AY0022625cellular_componentcytosolic large ribosomal subunit
AZ0002181biological_processcytoplasmic translation
AZ0003674molecular_functionmolecular_function
AZ0003735molecular_functionstructural constituent of ribosome
AZ0005737cellular_componentcytoplasm
AZ0005829cellular_componentcytosol
AZ0022625cellular_componentcytosolic large ribosomal subunit
AZ0022626cellular_componentcytosolic ribosome
Ba0003729molecular_functionmRNA binding
Ba0003735molecular_functionstructural constituent of ribosome
Ba0005730cellular_componentnucleolus
Ba0005829cellular_componentcytosol
Ba0009505cellular_componentplant-type cell wall
Ba0009506cellular_componentplasmodesma
Ba0009507cellular_componentchloroplast
Ba0022626cellular_componentcytosolic ribosome
Ba0022627cellular_componentcytosolic small ribosomal subunit
BA0002181biological_processcytoplasmic translation
BA0003729molecular_functionmRNA binding
BA0003735molecular_functionstructural constituent of ribosome
BA0005737cellular_componentcytoplasm
BA0005773cellular_componentvacuole
BA0005886cellular_componentplasma membrane
BA0022625cellular_componentcytosolic large ribosomal subunit
BB0003729molecular_functionmRNA binding
BB0003735molecular_functionstructural constituent of ribosome
BB0005737cellular_componentcytoplasm
BB0005794cellular_componentGolgi apparatus
BB0005829cellular_componentcytosol
BB0005886cellular_componentplasma membrane
BB0022627cellular_componentcytosolic small ribosomal subunit
BC0003674molecular_functionmolecular_function
BC0005575cellular_componentcellular_component
BC0008150biological_processbiological_process
BC0022625cellular_componentcytosolic large ribosomal subunit
BD0002181biological_processcytoplasmic translation
BD0003735molecular_functionstructural constituent of ribosome
BD0005737cellular_componentcytoplasm
BD0005829cellular_componentcytosol
BD0022625cellular_componentcytosolic large ribosomal subunit
BE0003674molecular_functionmolecular_function
BE0003735molecular_functionstructural constituent of ribosome
BE0005737cellular_componentcytoplasm
BE0005829cellular_componentcytosol
BE0022625cellular_componentcytosolic large ribosomal subunit
BF0002181biological_processcytoplasmic translation
BF0003723molecular_functionRNA binding
BF0003729molecular_functionmRNA binding
BF0003735molecular_functionstructural constituent of ribosome
BF0005730cellular_componentnucleolus
BF0005737cellular_componentcytoplasm
BF0005739cellular_componentmitochondrion
BF0005829cellular_componentcytosol
BF0022625cellular_componentcytosolic large ribosomal subunit
BF0022626cellular_componentcytosolic ribosome
BG0000325cellular_componentplant-type vacuole
BG0000470biological_processmaturation of LSU-rRNA
BG0003723molecular_functionRNA binding
BG0003729molecular_functionmRNA binding
BG0003735molecular_functionstructural constituent of ribosome
BG0005515molecular_functionprotein binding
BG0005737cellular_componentcytoplasm
BG0005794cellular_componentGolgi apparatus
BG0005829cellular_componentcytosol
BG0022625cellular_componentcytosolic large ribosomal subunit
BG0022626cellular_componentcytosolic ribosome
BH0003729molecular_functionmRNA binding
BH0003735molecular_functionstructural constituent of ribosome
BH0005737cellular_componentcytoplasm
BH0005829cellular_componentcytosol
BH0005840cellular_componentribosome
BH0009506cellular_componentplasmodesma
BH0017148biological_processnegative regulation of translation
BH0022625cellular_componentcytosolic large ribosomal subunit
BH0022626cellular_componentcytosolic ribosome
BI0003729molecular_functionmRNA binding
BI0003735molecular_functionstructural constituent of ribosome
BI0005576cellular_componentextracellular region
BI0005730cellular_componentnucleolus
BI0005783cellular_componentendoplasmic reticulum
BI0005829cellular_componentcytosol
BI0008150biological_processbiological_process
BI0009507cellular_componentchloroplast
BI0022625cellular_componentcytosolic large ribosomal subunit
BI0070180molecular_functionlarge ribosomal subunit rRNA binding
BJ0003735molecular_functionstructural constituent of ribosome
BJ0005634cellular_componentnucleus
BJ0005737cellular_componentcytoplasm
BJ0005794cellular_componentGolgi apparatus
BJ0005829cellular_componentcytosol
BJ0005840cellular_componentribosome
BJ0006412biological_processtranslation
BJ0009941cellular_componentchloroplast envelope
BJ0010224biological_processresponse to UV-B
BJ0022625cellular_componentcytosolic large ribosomal subunit
BJ0032502biological_processdevelopmental process
BK0000027biological_processribosomal large subunit assembly
BK0003729molecular_functionmRNA binding
BK0003735molecular_functionstructural constituent of ribosome
BK0005634cellular_componentnucleus
BK0005654cellular_componentnucleoplasm
BK0005730cellular_componentnucleolus
BK0005737cellular_componentcytoplasm
BK0005773cellular_componentvacuole
BK0005794cellular_componentGolgi apparatus
BK0005829cellular_componentcytosol
BK0006913biological_processnucleocytoplasmic transport
BK0008097molecular_function5S rRNA binding
BK0009507cellular_componentchloroplast
BK0009955biological_processadaxial/abaxial pattern specification
BK0009965biological_processleaf morphogenesis
BK0010015biological_processroot morphogenesis
BK0022625cellular_componentcytosolic large ribosomal subunit
BK0022626cellular_componentcytosolic ribosome
BK0051301biological_processcell division
BL0000325cellular_componentplant-type vacuole
BL0003729molecular_functionmRNA binding
BL0003735molecular_functionstructural constituent of ribosome
BL0005634cellular_componentnucleus
BL0009536cellular_componentplastid
BL0022626cellular_componentcytosolic ribosome
BL0022627cellular_componentcytosolic small ribosomal subunit
BL0030490biological_processmaturation of SSU-rRNA
BL0042742biological_processdefense response to bacterium
BM0000325cellular_componentplant-type vacuole
BM0002181biological_processcytoplasmic translation
BM0003729molecular_functionmRNA binding
BM0003735molecular_functionstructural constituent of ribosome
BM0005634cellular_componentnucleus
BM0005773cellular_componentvacuole
BM0005794cellular_componentGolgi apparatus
BM0009506cellular_componentplasmodesma
BM0009507cellular_componentchloroplast
BM0022625cellular_componentcytosolic large ribosomal subunit
BN0003729molecular_functionmRNA binding
BN0003735molecular_functionstructural constituent of ribosome
BN0005737cellular_componentcytoplasm
BN0005794cellular_componentGolgi apparatus
BN0005829cellular_componentcytosol
BN0006979biological_processresponse to oxidative stress
BN0009409biological_processresponse to cold
BN0009644biological_processresponse to high light intensity
BN0022625cellular_componentcytosolic large ribosomal subunit
BN0022626cellular_componentcytosolic ribosome
BO0000325cellular_componentplant-type vacuole
BO0002181biological_processcytoplasmic translation
BO0003729molecular_functionmRNA binding
BO0003735molecular_functionstructural constituent of ribosome
BO0005634cellular_componentnucleus
BO0005730cellular_componentnucleolus
BO0005794cellular_componentGolgi apparatus
BO0005829cellular_componentcytosol
BO0022625cellular_componentcytosolic large ribosomal subunit
BO0022626cellular_componentcytosolic ribosome
BP0000463biological_processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
BP0003729molecular_functionmRNA binding
BP0003735molecular_functionstructural constituent of ribosome
BP0005737cellular_componentcytoplasm
BP0022625cellular_componentcytosolic large ribosomal subunit
BQ0000325cellular_componentplant-type vacuole
BQ0002181biological_processcytoplasmic translation
BQ0003723molecular_functionRNA binding
BQ0003729molecular_functionmRNA binding
BQ0003735molecular_functionstructural constituent of ribosome
BQ0005515molecular_functionprotein binding
BQ0005730cellular_componentnucleolus
BQ0005737cellular_componentcytoplasm
BQ0005739cellular_componentmitochondrion
BQ0005773cellular_componentvacuole
BQ0005794cellular_componentGolgi apparatus
BQ0022625cellular_componentcytosolic large ribosomal subunit
BQ0022626cellular_componentcytosolic ribosome
BR0003735molecular_functionstructural constituent of ribosome
BS0000325cellular_componentplant-type vacuole
BS0003723molecular_functionRNA binding
BS0003729molecular_functionmRNA binding
BS0003735molecular_functionstructural constituent of ribosome
BS0005634cellular_componentnucleus
BS0005730cellular_componentnucleolus
BS0005737cellular_componentcytoplasm
BS0005773cellular_componentvacuole
BS0005794cellular_componentGolgi apparatus
BS0006412biological_processtranslation
BS0009505cellular_componentplant-type cell wall
BS0009506cellular_componentplasmodesma
BS0022625cellular_componentcytosolic large ribosomal subunit
BS0022626cellular_componentcytosolic ribosome
BT0003723molecular_functionRNA binding
BT0003729molecular_functionmRNA binding
BT0003735molecular_functionstructural constituent of ribosome
BT0005730cellular_componentnucleolus
BT0005737cellular_componentcytoplasm
BT0005773cellular_componentvacuole
BT0005829cellular_componentcytosol
BT0009505cellular_componentplant-type cell wall
BT0009506cellular_componentplasmodesma
BT0022625cellular_componentcytosolic large ribosomal subunit
BT0022626cellular_componentcytosolic ribosome
BU0003723molecular_functionRNA binding
BU0003729molecular_functionmRNA binding
BU0003735molecular_functionstructural constituent of ribosome
BU0005515molecular_functionprotein binding
BU0005634cellular_componentnucleus
BU0005730cellular_componentnucleolus
BU0005737cellular_componentcytoplasm
BU0005773cellular_componentvacuole
BU0005794cellular_componentGolgi apparatus
BU0005829cellular_componentcytosol
BU0006412biological_processtranslation
BU0009506cellular_componentplasmodesma
BU0022625cellular_componentcytosolic large ribosomal subunit
BV0003729molecular_functionmRNA binding
BV0003735molecular_functionstructural constituent of ribosome
BV0005730cellular_componentnucleolus
BV0005737cellular_componentcytoplasm
BV0005794cellular_componentGolgi apparatus
BV0005829cellular_componentcytosol
BV0005886cellular_componentplasma membrane
BV0006412biological_processtranslation
BV0009505cellular_componentplant-type cell wall
BV0009506cellular_componentplasmodesma
BV0022626cellular_componentcytosolic ribosome
BV0022627cellular_componentcytosolic small ribosomal subunit
BW0000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
BW0000461biological_processendonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
BW0002181biological_processcytoplasmic translation
BW0003735molecular_functionstructural constituent of ribosome
BW0005634cellular_componentnucleus
BW0005737cellular_componentcytoplasm
BW0005829cellular_componentcytosol
BW0009536cellular_componentplastid
BW0022627cellular_componentcytosolic small ribosomal subunit
Ca0002181biological_processcytoplasmic translation
Ca0003674molecular_functionmolecular_function
Ca0003735molecular_functionstructural constituent of ribosome
Ca0005829cellular_componentcytosol
Ca0005886cellular_componentplasma membrane
Ca0008150biological_processbiological_process
Ca0008270molecular_functionzinc ion binding
Ca0022627cellular_componentcytosolic small ribosomal subunit
Da0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Da0000911biological_processcytokinesis by cell plate formation
Da0003729molecular_functionmRNA binding
Da0003735molecular_functionstructural constituent of ribosome
Da0005730cellular_componentnucleolus
Da0005783cellular_componentendoplasmic reticulum
Da0005794cellular_componentGolgi apparatus
Da0005829cellular_componentcytosol
Da0006412biological_processtranslation
Da0009507cellular_componentchloroplast
Da0009965biological_processleaf morphogenesis
Da0010090biological_processtrichome morphogenesis
Da0022627cellular_componentcytosolic small ribosomal subunit
Da0032040cellular_componentsmall-subunit processome
Ea0000325cellular_componentplant-type vacuole
Ea0002181biological_processcytoplasmic translation
Ea0003729molecular_functionmRNA binding
Ea0003735molecular_functionstructural constituent of ribosome
Ea0005737cellular_componentcytoplasm
Ea0005794cellular_componentGolgi apparatus
Ea0005829cellular_componentcytosol
Ea0022625cellular_componentcytosolic large ribosomal subunit
Ea0022626cellular_componentcytosolic ribosome
Fa0003729molecular_functionmRNA binding
Fa0003735molecular_functionstructural constituent of ribosome
Fa0005634cellular_componentnucleus
Fa0005730cellular_componentnucleolus
Fa0005737cellular_componentcytoplasm
Fa0022625cellular_componentcytosolic large ribosomal subunit
Ga0003729molecular_functionmRNA binding
Ga0003735molecular_functionstructural constituent of ribosome
Ga0005634cellular_componentnucleus
Ga0005730cellular_componentnucleolus
Ga0005737cellular_componentcytoplasm
Ga0005783cellular_componentendoplasmic reticulum
Ga0016567biological_processprotein ubiquitination
Ga0019941biological_processmodification-dependent protein catabolic process
Ga0022625cellular_componentcytosolic large ribosomal subunit
Ga0022626cellular_componentcytosolic ribosome
Ga0031386molecular_functionprotein tag activity
Ha0003729molecular_functionmRNA binding
Ha0003735molecular_functionstructural constituent of ribosome
Ha0005737cellular_componentcytoplasm
Ha0005739cellular_componentmitochondrion
Ha0009506cellular_componentplasmodesma
Ha0022625cellular_componentcytosolic large ribosomal subunit
Ha0022626cellular_componentcytosolic ribosome
Ia0000325cellular_componentplant-type vacuole
Ia0002181biological_processcytoplasmic translation
Ia0003729molecular_functionmRNA binding
Ia0003735molecular_functionstructural constituent of ribosome
Ia0005634cellular_componentnucleus
Ia0005730cellular_componentnucleolus
Ia0005737cellular_componentcytoplasm
Ia0005773cellular_componentvacuole
Ia0005794cellular_componentGolgi apparatus
Ia0005829cellular_componentcytosol
Ia0009506cellular_componentplasmodesma
Ia0009941cellular_componentchloroplast envelope
Ia0022625cellular_componentcytosolic large ribosomal subunit
Ia0022626cellular_componentcytosolic ribosome
Ja0003735molecular_functionstructural constituent of ribosome
Ja0005730cellular_componentnucleolus
Ja0005737cellular_componentcytoplasm
Ja0005794cellular_componentGolgi apparatus
Ja0006412biological_processtranslation
Ja0009536cellular_componentplastid
Ja0022626cellular_componentcytosolic ribosome
Ja0022627cellular_componentcytosolic small ribosomal subunit
Ka0002181biological_processcytoplasmic translation
Ka0003729molecular_functionmRNA binding
Ka0003735molecular_functionstructural constituent of ribosome
Ka0005737cellular_componentcytoplasm
Ka0005794cellular_componentGolgi apparatus
Ka0009505cellular_componentplant-type cell wall
Ka0009536cellular_componentplastid
Ka0022626cellular_componentcytosolic ribosome
Ka0022627cellular_componentcytosolic small ribosomal subunit
La0003729molecular_functionmRNA binding
La0003735molecular_functionstructural constituent of ribosome
La0005737cellular_componentcytoplasm
La0005794cellular_componentGolgi apparatus
La0005886cellular_componentplasma membrane
La0008150biological_processbiological_process
La0022626cellular_componentcytosolic ribosome
La0022627cellular_componentcytosolic small ribosomal subunit
Ma0003729molecular_functionmRNA binding
Ma0003735molecular_functionstructural constituent of ribosome
Ma0005737cellular_componentcytoplasm
Ma0005829cellular_componentcytosol
Ma0022627cellular_componentcytosolic small ribosomal subunit
Na0003729molecular_functionmRNA binding
Na0003735molecular_functionstructural constituent of ribosome
Na0005737cellular_componentcytoplasm
Na0005829cellular_componentcytosol
Na0005840cellular_componentribosome
Na0006364biological_processrRNA processing
Na0006412biological_processtranslation
Na0009505cellular_componentplant-type cell wall
Na0009506cellular_componentplasmodesma
Na0022626cellular_componentcytosolic ribosome
Na0022627cellular_componentcytosolic small ribosomal subunit
Oa0000028biological_processribosomal small subunit assembly
Oa0003729molecular_functionmRNA binding
Oa0003735molecular_functionstructural constituent of ribosome
Oa0005737cellular_componentcytoplasm
Oa0009536cellular_componentplastid
Oa0022626cellular_componentcytosolic ribosome
Oa0022627cellular_componentcytosolic small ribosomal subunit
Oa0030490biological_processmaturation of SSU-rRNA
Pa0003729molecular_functionmRNA binding
Pa0003735molecular_functionstructural constituent of ribosome
Pa0005730cellular_componentnucleolus
Pa0005737cellular_componentcytoplasm
Pa0005739cellular_componentmitochondrion
Pa0005886cellular_componentplasma membrane
Pa0008150biological_processbiological_process
Pa0009536cellular_componentplastid
Pa0022627cellular_componentcytosolic small ribosomal subunit
Ra0003729molecular_functionmRNA binding
Ra0003735molecular_functionstructural constituent of ribosome
Ra0005730cellular_componentnucleolus
Ra0005794cellular_componentGolgi apparatus
Ra0006364biological_processrRNA processing
Ra0009506cellular_componentplasmodesma
Ra0009536cellular_componentplastid
Ra0022626cellular_componentcytosolic ribosome
Ra0022627cellular_componentcytosolic small ribosomal subunit
Ra0032040cellular_componentsmall-subunit processome
Ra0042274biological_processribosomal small subunit biogenesis
Ta0003729molecular_functionmRNA binding
Ta0003735molecular_functionstructural constituent of ribosome
Ta0005634cellular_componentnucleus
Ta0005886cellular_componentplasma membrane
Ta0009506cellular_componentplasmodesma
Ta0022626cellular_componentcytosolic ribosome
Ta0022627cellular_componentcytosolic small ribosomal subunit
Ua0000028biological_processribosomal small subunit assembly
Ua0003729molecular_functionmRNA binding
Ua0003735molecular_functionstructural constituent of ribosome
Ua0005730cellular_componentnucleolus
Ua0005737cellular_componentcytoplasm
Ua0005829cellular_componentcytosol
Ua0006412biological_processtranslation
Ua0022626cellular_componentcytosolic ribosome
Ua0022627cellular_componentcytosolic small ribosomal subunit
Va0003729molecular_functionmRNA binding
Va0003735molecular_functionstructural constituent of ribosome
Va0005737cellular_componentcytoplasm
Va0005794cellular_componentGolgi apparatus
Va0005840cellular_componentribosome
Va0005886cellular_componentplasma membrane
Va0006412biological_processtranslation
Va0022626cellular_componentcytosolic ribosome
Va0022627cellular_componentcytosolic small ribosomal subunit
Wa0000325cellular_componentplant-type vacuole
Wa0003729molecular_functionmRNA binding
Wa0003735molecular_functionstructural constituent of ribosome
Wa0005515molecular_functionprotein binding
Wa0005634cellular_componentnucleus
Wa0005730cellular_componentnucleolus
Wa0005737cellular_componentcytoplasm
Wa0005794cellular_componentGolgi apparatus
Wa0005829cellular_componentcytosol
Wa0005886cellular_componentplasma membrane
Wa0006413biological_processtranslational initiation
Wa0008150biological_processbiological_process
Wa0009505cellular_componentplant-type cell wall
Wa0009506cellular_componentplasmodesma
Wa0015935cellular_componentsmall ribosomal subunit
Wa0022626cellular_componentcytosolic ribosome
Wa0022627cellular_componentcytosolic small ribosomal subunit
Xa0003729molecular_functionmRNA binding
Xa0003735molecular_functionstructural constituent of ribosome
Xa0005737cellular_componentcytoplasm
Xa0005829cellular_componentcytosol
Xa0009505cellular_componentplant-type cell wall
Xa0009506cellular_componentplasmodesma
Xa0022626cellular_componentcytosolic ribosome
Xa0022627cellular_componentcytosolic small ribosomal subunit
Ya0003735molecular_functionstructural constituent of ribosome
Ya0005737cellular_componentcytoplasm
Ya0005794cellular_componentGolgi apparatus
Ya0022627cellular_componentcytosolic small ribosomal subunit
Za0000028biological_processribosomal small subunit assembly
Za0002181biological_processcytoplasmic translation
Za0003729molecular_functionmRNA binding
Za0003735molecular_functionstructural constituent of ribosome
Za0005634cellular_componentnucleus
Za0005737cellular_componentcytoplasm
Za0005794cellular_componentGolgi apparatus
Za0006412biological_processtranslation
Za0006970biological_processresponse to osmotic stress
Za0009506cellular_componentplasmodesma
Za0009507cellular_componentchloroplast
Za0009651biological_processresponse to salt stress
Za0015935cellular_componentsmall ribosomal subunit
Za0022626cellular_componentcytosolic ribosome
Za0022627cellular_componentcytosolic small ribosomal subunit
Functional Information from PROSITE/UniProt
site_idPS00049
Number of Residues27
DetailsRIBOSOMAL_L14 Ribosomal protein L14 signature. AVIVrqrkpwrrk.DGvfmyFedNagVI
ChainResidueDetails
BIALA79-ILE105

site_idPS00050
Number of Residues16
DetailsRIBOSOMAL_L23 Ribosomal protein L23 signature. KKAYVRLTpdydaldV
ChainResidueDetails
BNLYS132-VAL147

site_idPS00051
Number of Residues17
DetailsRIBOSOMAL_L39E Ribosomal protein L39e signature. RTdntIryNakrRHWRR
ChainResidueDetails
BAARG30-ARG46

site_idPS00052
Number of Residues27
DetailsRIBOSOMAL_S7 Ribosomal protein S7 signature. ErLtnsLMmhgrnnGKKlmavrIVkhA
ChainResidueDetails
ADGLU70-ALA96

site_idPS00053
Number of Residues18
DetailsRIBOSOMAL_S8 Ribosomal protein S8 signature. GyiVLTTSaGIMdheeAR
ChainResidueDetails
AEGLY100-ARG117

site_idPS00054
Number of Residues23
DetailsRIBOSOMAL_S11 Ribosomal protein S11 signature. LrALarS.GMkIgrieDvTPiPTD
ChainResidueDetails
UaLEU115-ASP137

site_idPS00055
Number of Residues8
DetailsRIBOSOMAL_S12 Ribosomal protein S12 signature. KqPNSAiR
ChainResidueDetails
VaLYS59-ARG66

site_idPS00056
Number of Residues13
DetailsRIBOSOMAL_S17 Ribosomal protein S17 signature. GDhIiIgQcRPLS
ChainResidueDetails
XaGLY121-SER133

site_idPS00299
Number of Residues26
DetailsUBIQUITIN_1 Ubiquitin domain signature. KakIqDkegIPpdqQrLIFaGkqleD
ChainResidueDetails
GaLYS27-ASP52

site_idPS00323
Number of Residues25
DetailsRIBOSOMAL_S19 Ribosomal protein S19 signature. NGKtfnqveIkpemIGhyLAEFsiS
ChainResidueDetails
YaASN103-SER127

site_idPS00358
Number of Residues17
DetailsRIBOSOMAL_L5 Ribosomal protein L5 signature. LeqLSGQtpVfSkARyT
ChainResidueDetails
BULEU39-THR55

site_idPS00360
Number of Residues19
DetailsRIBOSOMAL_S9 Ribosomal protein S9 signature. GGGhtSQvyAirqSiAKAL
ChainResidueDetails
AFGLY73-LEU91

site_idPS00361
Number of Residues16
DetailsRIBOSOMAL_S10 Ribosomal protein S10 signature. AkdkRLrvkGPVrMPT
ChainResidueDetails
BaALA46-THR61

site_idPS00362
Number of Residues31
DetailsRIBOSOMAL_S15 Ribosomal protein S15 signature. IrkHLernRkDkdSkfrLilVesrihrLarY
ChainResidueDetails
DaILE98-TYR128

site_idPS00464
Number of Residues25
DetailsRIBOSOMAL_L22 Ribosomal protein L22 signature. RrrTyRAhGRinpymsnpCHIELiL
ChainResidueDetails
BMARG127-LEU151

site_idPS00467
Number of Residues12
DetailsRIBOSOMAL_L2 Ribosomal protein L2 signature. PkvRGVAmNPvE
ChainResidueDetails
BQPRO197-GLU208

site_idPS00474
Number of Residues24
DetailsRIBOSOMAL_L3 Ribosomal protein L3 signature. FqkdemiDiiGvTkGKGyeGvvtR
ChainResidueDetails
BSPHE212-ARG235

site_idPS00475
Number of Residues33
DetailsRIBOSOMAL_L15 Ribosomal protein L15 signature. KVLGkGhLpenkpFvVkaklISktAekkIkeaG
ChainResidueDetails
HaLYS107-GLY139

site_idPS00526
Number of Residues20
DetailsRIBOSOMAL_L19E Ribosomal protein L19e signature. QKRLaAsvmkCGkgkVWLDP
ChainResidueDetails
AKGLN7-PRO26

site_idPS00528
Number of Residues15
DetailsRIBOSOMAL_S4E Ribosomal protein S4e signature. HlKRLNaPkhWmLdK
ChainResidueDetails
JaHIS8-LYS22

site_idPS00529
Number of Residues23
DetailsRIBOSOMAL_S24E Ribosomal protein S24e signature. FGggKSsGYGlIYDTvenakkfE
ChainResidueDetails
KaPHE66-GLU88

site_idPS00578
Number of Residues12
DetailsRIBOSOMAL_S6E Ribosomal protein S6e signature. IMGGcDkqGfPM
ChainResidueDetails
TaILE52-MET63

site_idPS00579
Number of Residues15
DetailsRIBOSOMAL_L29 Ribosomal protein L29 signature. KLSKIKvVRKSIAQV
ChainResidueDetails
BPLYS43-VAL57

site_idPS00580
Number of Residues21
DetailsRIBOSOMAL_L32E Ribosomal protein L32e signature. FiRpqsdRriTVkes..WRRpkG
ChainResidueDetails
AVPHE18-GLY38

site_idPS00585
Number of Residues33
DetailsRIBOSOMAL_S5 Ribosomal protein S5 signature. GQrtrFkAfvVVGDgn.GhVGlGvkcsk.EVat.AI
ChainResidueDetails
ACGLY65-ILE97

site_idPS00628
Number of Residues20
DetailsRIBOSOMAL_S19E Ribosomal protein S19e signature. PphfcksSggVaRhILQqLQ
ChainResidueDetails
BLPRO90-GLN109

site_idPS00632
Number of Residues25
DetailsRIBOSOMAL_S4 Ribosomal protein S4 signature. LErRLqtiVFKsgmAkSihhARvLI
ChainResidueDetails
ABLEU107-ILE131

site_idPS00634
Number of Residues33
DetailsRIBOSOMAL_L30 Ribosomal protein L30 signature. ILqlLrLrQifNgVflkvnkatvnMLrrVepYV
ChainResidueDetails
BRILE107-VAL139

site_idPS00646
Number of Residues14
DetailsRIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGlRHywGlrVRGQ
ChainResidueDetails
WaARG121-GLN134

site_idPS00700
Number of Residues22
DetailsRIBOSOMAL_L6_2 Ribosomal protein L6 signature 2. QkchVkkKdiRkFlDGIYVseK
ChainResidueDetails
IaGLN166-LYS187

site_idPS00709
Number of Residues25
DetailsRIBOSOMAL_L30E_1 Ribosomal protein L30e signature 1. SgkytlGyKsvLKslRgSkgKlILI
ChainResidueDetails
ATSER23-ILE47

site_idPS00712
Number of Residues16
DetailsRIBOSOMAL_S17E Ribosomal protein S17e signature. IpSKrLRNkIAGFsTH
ChainResidueDetails
BBILE41-HIS56

site_idPS00733
Number of Residues8
DetailsRIBOSOMAL_S26E Ribosomal protein S26e signature. YCVSCAIH
ChainResidueDetails
MaTYR73-HIS80

site_idPS00783
Number of Residues24
DetailsRIBOSOMAL_L13 Ribosomal protein L13 signature. VRGMIPhktkrGAaalarLkVFeG
ChainResidueDetails
BHVAL89-GLY112

site_idPS00939
Number of Residues27
DetailsRIBOSOMAL_L1E Ribosomal protein L1e signature. NvnmKrhAIvSAIaATAvpalvmaRGH
ChainResidueDetails
BTASN121-HIS147

site_idPS00948
Number of Residues14
DetailsRIBOSOMAL_S7E Ribosomal protein S7e signature. RLvRELEKKFSgKD
ChainResidueDetails
RaARG79-ASP92

site_idPS00961
Number of Residues9
DetailsRIBOSOMAL_S28E Ribosomal protein S28e signature. ESEREARrL
ChainResidueDetails
OaGLU55-LEU63

site_idPS00962
Number of Residues12
DetailsRIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. VrMMCAAEVHLG
ChainResidueDetails
ZaVAL19-GLY30

site_idPS00963
Number of Residues25
DetailsRIBOSOMAL_S2_2 Ribosomal protein S2 signature 2. PrlLILtDprtDhqpIkEgalgNIP
ChainResidueDetails
ZaPRO123-PRO147

site_idPS00993
Number of Residues21
DetailsRIBOSOMAL_L30E_2 Ribosomal protein L30e signature 2. DLGTacGKyfrvscLsIvDpG
ChainResidueDetails
ATASP79-GLY99

site_idPS00996
Number of Residues9
DetailsRIBOSOMAL_S21E Ribosomal protein S21e signature. LYIPRKCSA
ChainResidueDetails
BWLEU11-ALA19

site_idPS01073
Number of Residues18
DetailsRIBOSOMAL_L24E Ribosomal protein L24e signature. FsGqkIyPGrGirFiRsD
ChainResidueDetails
AOPHE10-ASP27

site_idPS01077
Number of Residues20
DetailsRIBOSOMAL_L37E Ribosomal protein L37e signature. GTgSfGkRrnks.HtlCvRCG
ChainResidueDetails
AYGLY4-GLY23

site_idPS01082
Number of Residues18
DetailsRIBOSOMAL_L7AE Ribosomal protein L7Ae signature. CrkmeVPYciVkGKsrLG
ChainResidueDetails
BGCYS164-GLY181

site_idPS01104
Number of Residues15
DetailsRIBOSOMAL_L13E Ribosomal protein L13e signature. RtGKGFTLeELkaaG
ChainResidueDetails
AGARG69-GLY83

site_idPS01105
Number of Residues22
DetailsRIBOSOMAL_L35AE Ribosomal protein L35Ae signature. GKVtRpHGnsGvVrAkFtsnLP
ChainResidueDetails
AWGLY74-PRO95

site_idPS01107
Number of Residues12
DetailsRIBOSOMAL_L27E Ribosomal protein L27e signature. GKNrWFFtkLRF
ChainResidueDetails
APGLY124-PHE135

site_idPS01108
Number of Residues18
DetailsRIBOSOMAL_L24 Ribosomal protein L24 signature. DDeVqIVrGtyKGre.GkV
ChainResidueDetails
BOASP52-VAL69

site_idPS01144
Number of Residues15
DetailsRIBOSOMAL_L31E Ribosomal protein L31e signature. VRVDvkLNkQiWsKG
ChainResidueDetails
AUVAL53-GLY67

site_idPS01145
Number of Residues14
DetailsRIBOSOMAL_L34E Ribosomal protein L34e signature. TkSnQhrivKTPGG
ChainResidueDetails
FaTHR15-GLY28

site_idPS01168
Number of Residues33
DetailsRIBOSOMAL_S27E Ribosomal protein S27e signature. KCqgCfnittvFShSqtvvvCgnCQtiLcqPtG
ChainResidueDetails
NaLYS38-GLY70

site_idPS01171
Number of Residues26
DetailsRIBOSOMAL_L21E Ribosomal protein L21e signature. GDyVdvkvngaihk.GmpHkfYhGrTG
ChainResidueDetails
AMGLY37-GLY62

site_idPS01172
Number of Residues12
DetailsRIBOSOMAL_L44E Ribosomal protein L44e signature. KtTKKivLRlqC
ChainResidueDetails
BDLYS63-CYS74

site_idPS01190
Number of Residues11
DetailsRIBOSOMAL_L36E Ribosomal protein L36e signature. PYEKRiTELLK
ChainResidueDetails
AXPRO55-LYS65

site_idPS01191
Number of Residues13
DetailsRIBOSOMAL_S3AE Ribosomal protein S3Ae signature. LkHRVfEvSLaDL
ChainResidueDetails
BVLEU61-LEU73

site_idPS01193
Number of Residues20
DetailsRIBOSOMAL_S8E Ribosomal protein S8e signature. RraTGGkqkqw.RkKrKyEMG
ChainResidueDetails
AaARG11-GLY30

site_idPS01194
Number of Residues24
DetailsRIBOSOMAL_L15E Ribosomal protein L15e signature. DKARrLGYkAkqGFVVYRvRVrRG
ChainResidueDetails
EaASP46-GLY69

site_idPS01257
Number of Residues22
DetailsRIBOSOMAL_L10E Ribosomal protein L10e signature. ADRlqtGMRgAFGKAlGtcARV
ChainResidueDetails
BJALA108-VAL129

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues262
DetailsRegion: {"description":"Disordered","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues194
DetailsCompositional bias: {"description":"Basic residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues1
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"22092075","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues62
DetailsDomain: {"description":"S4 RNA-binding"}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues11
DetailsCompositional bias: {"description":"Polar residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues1
DetailsModified residue: {"description":"Hydroxyproline","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI8
Number of Residues63
DetailsDomain: {"description":"S5 DRBM","evidences":[{"source":"PROSITE-ProRule","id":"PRU00268","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI10
Number of Residues19
DetailsCompositional bias: {"description":"Basic and acidic residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}
ChainResidueDetails

site_idSWS_FT_FI11
Number of Residues40
DetailsZinc finger: {"description":"C4-type","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI12
Number of Residues71
DetailsDomain: {"description":"KH type-2","evidences":[{"source":"PROSITE-ProRule","id":"PRU00118","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI13
Number of Residues21
DetailsZinc finger: {"description":"C4-type"}
ChainResidueDetails

site_idSWS_FT_FI14
Number of Residues33
DetailsCoiled coil: {"evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI15
Number of Residues4
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI16
Number of Residues4
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

251422

PDB entries from 2026-04-01

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