9GLC

NONO/SFPQ filament: local refinement central units (strand 1)

This is a non-PDB format compatible entry.

Functional Information from GO Data

Chain	GOid	namespace	contents
AC	0000122	biological_process	negative regulation of transcription by RNA polymerase II
AC	0000380	biological_process	alternative mRNA splicing, via spliceosome
AC	0000785	cellular_component	chromatin
AC	0000976	molecular_function	transcription cis-regulatory region binding
AC	0002218	biological_process	activation of innate immune response
AC	0002376	biological_process	immune system process
AC	0003676	molecular_function	nucleic acid binding
AC	0003677	molecular_function	DNA binding
AC	0003682	molecular_function	chromatin binding
AC	0003723	molecular_function	RNA binding
AC	0005634	cellular_component	nucleus
AC	0005654	cellular_component	nucleoplasm
AC	0006338	biological_process	chromatin remodeling
AC	0016363	cellular_component	nuclear matrix
AC	0016607	cellular_component	nuclear speck
AC	0030425	cellular_component	dendrite
AC	0042382	cellular_component	paraspeckles
AC	0042752	biological_process	regulation of circadian rhythm
AC	0042754	biological_process	negative regulation of circadian rhythm
AC	0042803	molecular_function	protein homodimerization activity
AC	0042826	molecular_function	histone deacetylase binding
AC	0045087	biological_process	innate immune response
AC	0045892	biological_process	negative regulation of DNA-templated transcription
AC	0045944	biological_process	positive regulation of transcription by RNA polymerase II
AC	0048511	biological_process	rhythmic process
AC	0090575	cellular_component	RNA polymerase II transcription regulator complex
AC	0098963	biological_process	dendritic transport of messenger ribonucleoprotein complex
AC	1902177	biological_process	positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway
AD	0001650	cellular_component	fibrillar center
AD	0002218	biological_process	activation of innate immune response
AD	0002376	biological_process	immune system process
AD	0003677	molecular_function	DNA binding
AD	0003682	molecular_function	chromatin binding
AD	0003723	molecular_function	RNA binding
AD	0005634	cellular_component	nucleus
AD	0005654	cellular_component	nucleoplasm
AD	0005694	cellular_component	chromosome
AD	0005730	cellular_component	nucleolus
AD	0006281	biological_process	DNA repair
AD	0006310	biological_process	DNA recombination
AD	0006351	biological_process	DNA-templated transcription
AD	0006397	biological_process	mRNA processing
AD	0006974	biological_process	DNA damage response
AD	0008380	biological_process	RNA splicing
AD	0016363	cellular_component	nuclear matrix
AD	0016607	cellular_component	nuclear speck
AD	0042382	cellular_component	paraspeckles
AD	0042752	biological_process	regulation of circadian rhythm
AD	0042802	molecular_function	identical protein binding
AD	0045087	biological_process	innate immune response
AD	0045892	biological_process	negative regulation of DNA-templated transcription
AD	0048511	biological_process	rhythmic process
AD	0090575	cellular_component	RNA polymerase II transcription regulator complex
AD	1903377	biological_process	negative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway
AE	0000122	biological_process	negative regulation of transcription by RNA polymerase II
AE	0000380	biological_process	alternative mRNA splicing, via spliceosome
AE	0000785	cellular_component	chromatin
AE	0000976	molecular_function	transcription cis-regulatory region binding
AE	0002218	biological_process	activation of innate immune response
AE	0002376	biological_process	immune system process
AE	0003676	molecular_function	nucleic acid binding
AE	0003677	molecular_function	DNA binding
AE	0003682	molecular_function	chromatin binding
AE	0003723	molecular_function	RNA binding
AE	0005634	cellular_component	nucleus
AE	0005654	cellular_component	nucleoplasm
AE	0006338	biological_process	chromatin remodeling
AE	0016363	cellular_component	nuclear matrix
AE	0016607	cellular_component	nuclear speck
AE	0030425	cellular_component	dendrite
AE	0042382	cellular_component	paraspeckles
AE	0042752	biological_process	regulation of circadian rhythm
AE	0042754	biological_process	negative regulation of circadian rhythm
AE	0042803	molecular_function	protein homodimerization activity
AE	0042826	molecular_function	histone deacetylase binding
AE	0045087	biological_process	innate immune response
AE	0045892	biological_process	negative regulation of DNA-templated transcription
AE	0045944	biological_process	positive regulation of transcription by RNA polymerase II
AE	0048511	biological_process	rhythmic process
AE	0090575	cellular_component	RNA polymerase II transcription regulator complex
AE	0098963	biological_process	dendritic transport of messenger ribonucleoprotein complex
AE	1902177	biological_process	positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway
BC	0000122	biological_process	negative regulation of transcription by RNA polymerase II
BC	0000380	biological_process	alternative mRNA splicing, via spliceosome
BC	0000785	cellular_component	chromatin
BC	0000976	molecular_function	transcription cis-regulatory region binding
BC	0002218	biological_process	activation of innate immune response
BC	0002376	biological_process	immune system process
BC	0003676	molecular_function	nucleic acid binding
BC	0003677	molecular_function	DNA binding
BC	0003682	molecular_function	chromatin binding
BC	0003723	molecular_function	RNA binding
BC	0005634	cellular_component	nucleus
BC	0005654	cellular_component	nucleoplasm
BC	0006338	biological_process	chromatin remodeling
BC	0016363	cellular_component	nuclear matrix
BC	0016607	cellular_component	nuclear speck
BC	0030425	cellular_component	dendrite
BC	0042382	cellular_component	paraspeckles
BC	0042752	biological_process	regulation of circadian rhythm
BC	0042754	biological_process	negative regulation of circadian rhythm
BC	0042803	molecular_function	protein homodimerization activity
BC	0042826	molecular_function	histone deacetylase binding
BC	0045087	biological_process	innate immune response
BC	0045892	biological_process	negative regulation of DNA-templated transcription
BC	0045944	biological_process	positive regulation of transcription by RNA polymerase II
BC	0048511	biological_process	rhythmic process
BC	0090575	cellular_component	RNA polymerase II transcription regulator complex
BC	0098963	biological_process	dendritic transport of messenger ribonucleoprotein complex
BC	1902177	biological_process	positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway
BD	0001650	cellular_component	fibrillar center
BD	0002218	biological_process	activation of innate immune response
BD	0002376	biological_process	immune system process
BD	0003677	molecular_function	DNA binding
BD	0003682	molecular_function	chromatin binding
BD	0003723	molecular_function	RNA binding
BD	0005634	cellular_component	nucleus
BD	0005654	cellular_component	nucleoplasm
BD	0005694	cellular_component	chromosome
BD	0005730	cellular_component	nucleolus
BD	0006281	biological_process	DNA repair
BD	0006310	biological_process	DNA recombination
BD	0006351	biological_process	DNA-templated transcription
BD	0006397	biological_process	mRNA processing
BD	0006974	biological_process	DNA damage response
BD	0008380	biological_process	RNA splicing
BD	0016363	cellular_component	nuclear matrix
BD	0016607	cellular_component	nuclear speck
BD	0042382	cellular_component	paraspeckles
BD	0042752	biological_process	regulation of circadian rhythm
BD	0042802	molecular_function	identical protein binding
BD	0045087	biological_process	innate immune response
BD	0045892	biological_process	negative regulation of DNA-templated transcription
BD	0048511	biological_process	rhythmic process
BD	0090575	cellular_component	RNA polymerase II transcription regulator complex
BD	1903377	biological_process	negative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway
BE	0000122	biological_process	negative regulation of transcription by RNA polymerase II
BE	0000380	biological_process	alternative mRNA splicing, via spliceosome
BE	0000785	cellular_component	chromatin
BE	0000976	molecular_function	transcription cis-regulatory region binding
BE	0002218	biological_process	activation of innate immune response
BE	0002376	biological_process	immune system process
BE	0003676	molecular_function	nucleic acid binding
BE	0003677	molecular_function	DNA binding
BE	0003682	molecular_function	chromatin binding
BE	0003723	molecular_function	RNA binding
BE	0005634	cellular_component	nucleus
BE	0005654	cellular_component	nucleoplasm
BE	0006338	biological_process	chromatin remodeling
BE	0016363	cellular_component	nuclear matrix
BE	0016607	cellular_component	nuclear speck
BE	0030425	cellular_component	dendrite
BE	0042382	cellular_component	paraspeckles
BE	0042752	biological_process	regulation of circadian rhythm
BE	0042754	biological_process	negative regulation of circadian rhythm
BE	0042803	molecular_function	protein homodimerization activity
BE	0042826	molecular_function	histone deacetylase binding
BE	0045087	biological_process	innate immune response
BE	0045892	biological_process	negative regulation of DNA-templated transcription
BE	0045944	biological_process	positive regulation of transcription by RNA polymerase II
BE	0048511	biological_process	rhythmic process
BE	0090575	cellular_component	RNA polymerase II transcription regulator complex
BE	0098963	biological_process	dendritic transport of messenger ribonucleoprotein complex
BE	1902177	biological_process	positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway
BF	0001650	cellular_component	fibrillar center
BF	0002218	biological_process	activation of innate immune response
BF	0002376	biological_process	immune system process
BF	0003677	molecular_function	DNA binding
BF	0003682	molecular_function	chromatin binding
BF	0003723	molecular_function	RNA binding
BF	0005634	cellular_component	nucleus
BF	0005654	cellular_component	nucleoplasm
BF	0005694	cellular_component	chromosome
BF	0005730	cellular_component	nucleolus
BF	0006281	biological_process	DNA repair
BF	0006310	biological_process	DNA recombination
BF	0006351	biological_process	DNA-templated transcription
BF	0006397	biological_process	mRNA processing
BF	0006974	biological_process	DNA damage response
BF	0008380	biological_process	RNA splicing
BF	0016363	cellular_component	nuclear matrix
BF	0016607	cellular_component	nuclear speck
BF	0042382	cellular_component	paraspeckles
BF	0042752	biological_process	regulation of circadian rhythm
BF	0042802	molecular_function	identical protein binding
BF	0045087	biological_process	innate immune response
BF	0045892	biological_process	negative regulation of DNA-templated transcription
BF	0048511	biological_process	rhythmic process
BF	0090575	cellular_component	RNA polymerase II transcription regulator complex
BF	1903377	biological_process	negative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway
CC	0000122	biological_process	negative regulation of transcription by RNA polymerase II
CC	0000380	biological_process	alternative mRNA splicing, via spliceosome
CC	0000785	cellular_component	chromatin
CC	0000976	molecular_function	transcription cis-regulatory region binding
CC	0002218	biological_process	activation of innate immune response
CC	0002376	biological_process	immune system process
CC	0003676	molecular_function	nucleic acid binding
CC	0003677	molecular_function	DNA binding
CC	0003682	molecular_function	chromatin binding
CC	0003723	molecular_function	RNA binding
CC	0005634	cellular_component	nucleus
CC	0005654	cellular_component	nucleoplasm
CC	0006338	biological_process	chromatin remodeling
CC	0016363	cellular_component	nuclear matrix
CC	0016607	cellular_component	nuclear speck
CC	0030425	cellular_component	dendrite
CC	0042382	cellular_component	paraspeckles
CC	0042752	biological_process	regulation of circadian rhythm
CC	0042754	biological_process	negative regulation of circadian rhythm
CC	0042803	molecular_function	protein homodimerization activity
CC	0042826	molecular_function	histone deacetylase binding
CC	0045087	biological_process	innate immune response
CC	0045892	biological_process	negative regulation of DNA-templated transcription
CC	0045944	biological_process	positive regulation of transcription by RNA polymerase II
CC	0048511	biological_process	rhythmic process
CC	0090575	cellular_component	RNA polymerase II transcription regulator complex
CC	0098963	biological_process	dendritic transport of messenger ribonucleoprotein complex
CC	1902177	biological_process	positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway
CE	0000122	biological_process	negative regulation of transcription by RNA polymerase II
CE	0000380	biological_process	alternative mRNA splicing, via spliceosome
CE	0000785	cellular_component	chromatin
CE	0000976	molecular_function	transcription cis-regulatory region binding
CE	0002218	biological_process	activation of innate immune response
CE	0002376	biological_process	immune system process
CE	0003676	molecular_function	nucleic acid binding
CE	0003677	molecular_function	DNA binding
CE	0003682	molecular_function	chromatin binding
CE	0003723	molecular_function	RNA binding
CE	0005634	cellular_component	nucleus
CE	0005654	cellular_component	nucleoplasm
CE	0006338	biological_process	chromatin remodeling
CE	0016363	cellular_component	nuclear matrix
CE	0016607	cellular_component	nuclear speck
CE	0030425	cellular_component	dendrite
CE	0042382	cellular_component	paraspeckles
CE	0042752	biological_process	regulation of circadian rhythm
CE	0042754	biological_process	negative regulation of circadian rhythm
CE	0042803	molecular_function	protein homodimerization activity
CE	0042826	molecular_function	histone deacetylase binding
CE	0045087	biological_process	innate immune response
CE	0045892	biological_process	negative regulation of DNA-templated transcription
CE	0045944	biological_process	positive regulation of transcription by RNA polymerase II
CE	0048511	biological_process	rhythmic process
CE	0090575	cellular_component	RNA polymerase II transcription regulator complex
CE	0098963	biological_process	dendritic transport of messenger ribonucleoprotein complex
CE	1902177	biological_process	positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway
CF	0001650	cellular_component	fibrillar center
CF	0002218	biological_process	activation of innate immune response
CF	0002376	biological_process	immune system process
CF	0003677	molecular_function	DNA binding
CF	0003682	molecular_function	chromatin binding
CF	0003723	molecular_function	RNA binding
CF	0005634	cellular_component	nucleus
CF	0005654	cellular_component	nucleoplasm
CF	0005694	cellular_component	chromosome
CF	0005730	cellular_component	nucleolus
CF	0006281	biological_process	DNA repair
CF	0006310	biological_process	DNA recombination
CF	0006351	biological_process	DNA-templated transcription
CF	0006397	biological_process	mRNA processing
CF	0006974	biological_process	DNA damage response
CF	0008380	biological_process	RNA splicing
CF	0016363	cellular_component	nuclear matrix
CF	0016607	cellular_component	nuclear speck
CF	0042382	cellular_component	paraspeckles
CF	0042752	biological_process	regulation of circadian rhythm
CF	0042802	molecular_function	identical protein binding
CF	0045087	biological_process	innate immune response
CF	0045892	biological_process	negative regulation of DNA-templated transcription
CF	0048511	biological_process	rhythmic process
CF	0090575	cellular_component	RNA polymerase II transcription regulator complex
CF	1903377	biological_process	negative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway