9EH1
RNA polymerase II-DSIF-SPT6-PAF1c-TFIIS-IWS1-SETD2-nucleosome, 20 bp upstream
This is a non-PDB format compatible entry.
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| a | 0000786 | cellular_component | nucleosome |
| a | 0003677 | molecular_function | DNA binding |
| a | 0005634 | cellular_component | nucleus |
| a | 0005694 | cellular_component | chromosome |
| a | 0030527 | molecular_function | structural constituent of chromatin |
| a | 0031492 | molecular_function | nucleosomal DNA binding |
| a | 0031507 | biological_process | heterochromatin formation |
| a | 0046982 | molecular_function | protein heterodimerization activity |
| A | 0003677 | molecular_function | DNA binding |
| A | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
| A | 0006351 | biological_process | DNA-templated transcription |
| b | 0003677 | molecular_function | DNA binding |
| b | 0030527 | molecular_function | structural constituent of chromatin |
| B | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| B | 0001172 | biological_process | RNA-templated transcription |
| B | 0003677 | molecular_function | DNA binding |
| B | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
| B | 0003968 | molecular_function | RNA-directed RNA polymerase activity |
| B | 0005634 | cellular_component | nucleus |
| B | 0005654 | cellular_component | nucleoplasm |
| B | 0006351 | biological_process | DNA-templated transcription |
| B | 0008270 | molecular_function | zinc ion binding |
| B | 0016740 | molecular_function | transferase activity |
| B | 0016779 | molecular_function | nucleotidyltransferase activity |
| B | 0016787 | molecular_function | hydrolase activity |
| B | 0032549 | molecular_function | ribonucleoside binding |
| B | 0034062 | molecular_function | 5'-3' RNA polymerase activity |
| B | 0046872 | molecular_function | metal ion binding |
| c | 0000786 | cellular_component | nucleosome |
| c | 0003677 | molecular_function | DNA binding |
| c | 0005634 | cellular_component | nucleus |
| c | 0005694 | cellular_component | chromosome |
| c | 0030527 | molecular_function | structural constituent of chromatin |
| c | 0031507 | biological_process | heterochromatin formation |
| c | 0046982 | molecular_function | protein heterodimerization activity |
| C | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| C | 0003677 | molecular_function | DNA binding |
| C | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
| C | 0005634 | cellular_component | nucleus |
| C | 0005654 | cellular_component | nucleoplasm |
| C | 0005665 | cellular_component | RNA polymerase II, core complex |
| C | 0006351 | biological_process | DNA-templated transcription |
| C | 0006366 | biological_process | transcription by RNA polymerase II |
| C | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
| C | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| C | 0046872 | molecular_function | metal ion binding |
| C | 0046983 | molecular_function | protein dimerization activity |
| d | 0000786 | cellular_component | nucleosome |
| d | 0002227 | biological_process | innate immune response in mucosa |
| d | 0003677 | molecular_function | DNA binding |
| d | 0005515 | molecular_function | protein binding |
| d | 0005615 | cellular_component | extracellular space |
| d | 0005634 | cellular_component | nucleus |
| d | 0005694 | cellular_component | chromosome |
| d | 0006325 | biological_process | chromatin organization |
| d | 0019731 | biological_process | antibacterial humoral response |
| d | 0030527 | molecular_function | structural constituent of chromatin |
| d | 0031507 | biological_process | heterochromatin formation |
| d | 0046982 | molecular_function | protein heterodimerization activity |
| d | 0061844 | biological_process | antimicrobial humoral immune response mediated by antimicrobial peptide |
| D | 0000166 | molecular_function | nucleotide binding |
| D | 0006352 | biological_process | DNA-templated transcription initiation |
| D | 0030880 | cellular_component | RNA polymerase complex |
| e | 0000786 | cellular_component | nucleosome |
| e | 0003677 | molecular_function | DNA binding |
| e | 0005634 | cellular_component | nucleus |
| e | 0005694 | cellular_component | chromosome |
| e | 0030527 | molecular_function | structural constituent of chromatin |
| e | 0031492 | molecular_function | nucleosomal DNA binding |
| e | 0031507 | biological_process | heterochromatin formation |
| e | 0046982 | molecular_function | protein heterodimerization activity |
| E | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| E | 0003677 | molecular_function | DNA binding |
| E | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
| E | 0005634 | cellular_component | nucleus |
| E | 0005654 | cellular_component | nucleoplasm |
| E | 0005665 | cellular_component | RNA polymerase II, core complex |
| E | 0005666 | cellular_component | RNA polymerase III complex |
| E | 0005736 | cellular_component | RNA polymerase I complex |
| E | 0006351 | biological_process | DNA-templated transcription |
| E | 0006362 | biological_process | transcription elongation by RNA polymerase I |
| E | 0006366 | biological_process | transcription by RNA polymerase II |
| E | 0042797 | biological_process | tRNA transcription by RNA polymerase III |
| f | 0003677 | molecular_function | DNA binding |
| f | 0030527 | molecular_function | structural constituent of chromatin |
| F | 0003677 | molecular_function | DNA binding |
| F | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
| F | 0005634 | cellular_component | nucleus |
| F | 0005665 | cellular_component | RNA polymerase II, core complex |
| F | 0006351 | biological_process | DNA-templated transcription |
| g | 0000786 | cellular_component | nucleosome |
| g | 0003677 | molecular_function | DNA binding |
| g | 0005634 | cellular_component | nucleus |
| g | 0005694 | cellular_component | chromosome |
| g | 0030527 | molecular_function | structural constituent of chromatin |
| g | 0031507 | biological_process | heterochromatin formation |
| g | 0046982 | molecular_function | protein heterodimerization activity |
| G | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| G | 0003676 | molecular_function | nucleic acid binding |
| G | 0005634 | cellular_component | nucleus |
| G | 0006351 | biological_process | DNA-templated transcription |
| G | 0006352 | biological_process | DNA-templated transcription initiation |
| h | 0000786 | cellular_component | nucleosome |
| h | 0002227 | biological_process | innate immune response in mucosa |
| h | 0003677 | molecular_function | DNA binding |
| h | 0005515 | molecular_function | protein binding |
| h | 0005615 | cellular_component | extracellular space |
| h | 0005634 | cellular_component | nucleus |
| h | 0005694 | cellular_component | chromosome |
| h | 0006325 | biological_process | chromatin organization |
| h | 0019731 | biological_process | antibacterial humoral response |
| h | 0030527 | molecular_function | structural constituent of chromatin |
| h | 0031507 | biological_process | heterochromatin formation |
| h | 0046982 | molecular_function | protein heterodimerization activity |
| h | 0061844 | biological_process | antimicrobial humoral immune response mediated by antimicrobial peptide |
| H | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| H | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
| H | 0005634 | cellular_component | nucleus |
| H | 0005654 | cellular_component | nucleoplasm |
| H | 0005665 | cellular_component | RNA polymerase II, core complex |
| H | 0005666 | cellular_component | RNA polymerase III complex |
| H | 0005736 | cellular_component | RNA polymerase I complex |
| H | 0006351 | biological_process | DNA-templated transcription |
| I | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| I | 0001193 | biological_process | maintenance of transcriptional fidelity during transcription elongation by RNA polymerase II |
| I | 0003676 | molecular_function | nucleic acid binding |
| I | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
| I | 0005634 | cellular_component | nucleus |
| I | 0005654 | cellular_component | nucleoplasm |
| I | 0005665 | cellular_component | RNA polymerase II, core complex |
| I | 0005730 | cellular_component | nucleolus |
| I | 0006283 | biological_process | transcription-coupled nucleotide-excision repair |
| I | 0006351 | biological_process | DNA-templated transcription |
| I | 0006366 | biological_process | transcription by RNA polymerase II |
| I | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
| I | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| I | 0008270 | molecular_function | zinc ion binding |
| I | 0046872 | molecular_function | metal ion binding |
| J | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| J | 0003677 | molecular_function | DNA binding |
| J | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
| J | 0005634 | cellular_component | nucleus |
| J | 0005665 | cellular_component | RNA polymerase II, core complex |
| J | 0005666 | cellular_component | RNA polymerase III complex |
| J | 0005736 | cellular_component | RNA polymerase I complex |
| J | 0006351 | biological_process | DNA-templated transcription |
| J | 0006360 | biological_process | transcription by RNA polymerase I |
| J | 0006366 | biological_process | transcription by RNA polymerase II |
| J | 0008270 | molecular_function | zinc ion binding |
| J | 0042797 | biological_process | tRNA transcription by RNA polymerase III |
| J | 0046872 | molecular_function | metal ion binding |
| K | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| K | 0003677 | molecular_function | DNA binding |
| K | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
| K | 0005634 | cellular_component | nucleus |
| K | 0005665 | cellular_component | RNA polymerase II, core complex |
| K | 0006351 | biological_process | DNA-templated transcription |
| K | 0006366 | biological_process | transcription by RNA polymerase II |
| K | 0046983 | molecular_function | protein dimerization activity |
| l | 0005634 | cellular_component | nucleus |
| l | 0016279 | molecular_function | protein-lysine N-methyltransferase activity |
| l | 0042054 | molecular_function | histone methyltransferase activity |
| l | 0046975 | molecular_function | histone H3K36 methyltransferase activity |
| L | 0003677 | molecular_function | DNA binding |
| L | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
| L | 0006351 | biological_process | DNA-templated transcription |
| L | 0008270 | molecular_function | zinc ion binding |
| M | 0003676 | molecular_function | nucleic acid binding |
| M | 0003677 | molecular_function | DNA binding |
| M | 0006139 | biological_process | nucleobase-containing compound metabolic process |
| M | 0140673 | biological_process | transcription elongation-coupled chromatin remodeling |
| Q | 0006355 | biological_process | regulation of DNA-templated transcription |
| R | 0003677 | molecular_function | DNA binding |
| S | 0003676 | molecular_function | nucleic acid binding |
| S | 0005634 | cellular_component | nucleus |
| S | 0006351 | biological_process | DNA-templated transcription |
| S | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| S | 0008270 | molecular_function | zinc ion binding |
| U | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| U | 0016593 | cellular_component | Cdc73/Paf1 complex |
| V | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| V | 0016593 | cellular_component | Cdc73/Paf1 complex |
| W | 0000791 | cellular_component | euchromatin |
| W | 0000956 | biological_process | nuclear-transcribed mRNA catabolic process |
| W | 0005515 | molecular_function | protein binding |
| W | 0005634 | cellular_component | nucleus |
| W | 0005654 | cellular_component | nucleoplasm |
| W | 0005737 | cellular_component | cytoplasm |
| W | 0005829 | cellular_component | cytosol |
| W | 0006351 | biological_process | DNA-templated transcription |
| W | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| W | 0016055 | biological_process | Wnt signaling pathway |
| W | 0016593 | cellular_component | Cdc73/Paf1 complex |
| W | 0045638 | biological_process | negative regulation of myeloid cell differentiation |
| W | 0055087 | cellular_component | Ski complex |
| W | 0070478 | biological_process | nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay |
| W | 0072344 | biological_process | rescue of stalled ribosome |
| Y | 0000122 | biological_process | negative regulation of transcription by RNA polymerase II |
| Y | 0000993 | molecular_function | RNA polymerase II complex binding |
| Y | 0005515 | molecular_function | protein binding |
| Y | 0005634 | cellular_component | nucleus |
| Y | 0005654 | cellular_component | nucleoplasm |
| Y | 0006351 | biological_process | DNA-templated transcription |
| Y | 0006355 | biological_process | regulation of DNA-templated transcription |
| Y | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| Y | 0008270 | molecular_function | zinc ion binding |
| Y | 0032044 | cellular_component | DSIF complex |
| Y | 0032785 | biological_process | negative regulation of DNA-templated transcription, elongation |
| Y | 0032786 | biological_process | positive regulation of DNA-templated transcription, elongation |
| Y | 0034243 | biological_process | regulation of transcription elongation by RNA polymerase II |
| Y | 0045944 | biological_process | positive regulation of transcription by RNA polymerase II |
| Y | 0046872 | molecular_function | metal ion binding |
| Y | 0046982 | molecular_function | protein heterodimerization activity |
| Y | 0140673 | biological_process | transcription elongation-coupled chromatin remodeling |
| Y | 0140870 | molecular_function | RNA polymerase inhibitor activity |
| Y | 0160239 | biological_process | transcription pausing by RNA polymerase II |
| Z | 0006354 | biological_process | DNA-templated transcription elongation |
| Z | 0006357 | biological_process | regulation of transcription by RNA polymerase II |
| Z | 0032784 | biological_process | regulation of DNA-templated transcription elongation |
Functional Information from PROSITE/UniProt
| site_id | PS00018 |
| Number of Residues | 13 |
| Details | EF_HAND_1 EF-hand calcium-binding domain. DNDPSDYVEqdDI |
| Chain | Residue | Details |
| C | ASP136-ILE148 |
| site_id | PS00046 |
| Number of Residues | 7 |
| Details | HISTONE_H2A Histone H2A signature. AGLqFPV |
| Chain | Residue | Details |
| c | ALA21-VAL27 |
| site_id | PS00290 |
| Number of Residues | 7 |
| Details | IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YVCTAPH |
| Chain | Residue | Details |
| I | TYR112-HIS118 |
| site_id | PS00322 |
| Number of Residues | 7 |
| Details | HISTONE_H3_1 Histone H3 signature 1. KAPRKQL |
| Chain | Residue | Details |
| a | LYS14-LEU20 |
| site_id | PS00357 |
| Number of Residues | 23 |
| Details | HISTONE_H2B Histone H2B signature. REIQTavRlLLpGELaKHAVSEG |
| Chain | Residue | Details |
| d | ARG92-GLY114 |
| site_id | PS00446 |
| Number of Residues | 41 |
| Details | RNA_POL_D_30KD RNA polymerases D / 30 to 40 Kd subunits signature. NSIRRvfiaevpiiAidwVqidaNsSvlhDEfIAhRLGLIP |
| Chain | Residue | Details |
| C | ASN32-PRO72 |
| site_id | PS00466 |
| Number of Residues | 38 |
| Details | ZF_TFIIS_1 Zinc finger TFIIS-type signature. CqkCghkeavffqSHSARaEDAmrlyyvCtaph.CghrW |
| Chain | Residue | Details |
| I | CYS86-TRP123 | |
| S | CYS263-TRP298 |
| site_id | PS00678 |
| Number of Residues | 15 |
| Details | WD_REPEATS_1 Trp-Asp (WD) repeats signature. AASSslDaHIRLWDL |
| Chain | Residue | Details |
| W | ALA79-LEU93 |
| site_id | PS00959 |
| Number of Residues | 9 |
| Details | HISTONE_H3_2 Histone H3 signature 2. PFqRLVREI |
| Chain | Residue | Details |
| a | PRO66-ILE74 |
| site_id | PS01030 |
| Number of Residues | 27 |
| Details | RNA_POL_M_15KD RNA polymerases M / 15 Kd subunits signature. FCQECNNMLypkedkenrillyaCrnC |
| Chain | Residue | Details |
| I | PHE16-CYS42 |
| site_id | PS01110 |
| Number of Residues | 14 |
| Details | RNA_POL_H_23KD RNA polymerases H / 23 Kd subunits signature. HELVPEHvvMtkEE |
| Chain | Residue | Details |
| E | HIS142-GLU155 |
| site_id | PS01111 |
| Number of Residues | 15 |
| Details | RNA_POL_K_14KD RNA polymerases K / 14 to 18 Kd subunits signature. TkYErARvLGtRAlQ |
| Chain | Residue | Details |
| F | THR58-GLN72 |
| site_id | PS01112 |
| Number of Residues | 10 |
| Details | RNA_POL_N_8KD RNA polymerases N / 8 Kd subunits signature. IIPVrCFTCG |
| Chain | Residue | Details |
| J | ILE2-GLY11 |
| site_id | PS01154 |
| Number of Residues | 32 |
| Details | RNA_POL_L_13KD RNA polymerases L / 13 to 16 Kd subunits signature. InkEdHTLgNiIksqLlkdpqVlfagYkvpHP |
| Chain | Residue | Details |
| K | ILE35-PRO66 |
| site_id | PS01166 |
| Number of Residues | 13 |
| Details | RNA_POL_BETA RNA polymerases beta chain signature. GdKFASrHGQKGT |
| Chain | Residue | Details |
| B | GLY932-THR944 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI11 |
| Number of Residues | 45 |
| Details | Zinc finger: {"description":"C4-type","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI12 |
| Number of Residues | 42 |
| Details | Zinc finger: {"description":"TFIIS-type","evidences":[{"source":"PROSITE-ProRule","id":"PRU00472","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI13 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU10145","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI14 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00472","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI16 |
| Number of Residues | 34 |
| Details | Repeat: {"description":"TPR 1"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI17 |
| Number of Residues | 33 |
| Details | Repeat: {"description":"TPR 2"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI18 |
| Number of Residues | 33 |
| Details | Repeat: {"description":"TPR 3"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI19 |
| Number of Residues | 33 |
| Details | Repeat: {"description":"TPR 4"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI20 |
| Number of Residues | 33 |
| Details | Repeat: {"description":"TPR 5"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI21 |
| Number of Residues | 33 |
| Details | Repeat: {"description":"TPR 6"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI22 |
| Number of Residues | 33 |
| Details | Repeat: {"description":"TPR 7"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI23 |
| Number of Residues | 32 |
| Details | Repeat: {"description":"TPR 8"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI24 |
| Number of Residues | 33 |
| Details | Repeat: {"description":"TPR 9"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI25 |
| Number of Residues | 33 |
| Details | Repeat: {"description":"TPR 10"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI26 |
| Number of Residues | 33 |
| Details | Repeat: {"description":"TPR 11"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI27 |
| Number of Residues | 32 |
| Details | Repeat: {"description":"TPR 12"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI28 |
| Number of Residues | 33 |
| Details | Repeat: {"description":"TPR 13"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI29 |
| Number of Residues | 33 |
| Details | Repeat: {"description":"TPR 14"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI30 |
| Number of Residues | 33 |
| Details | Repeat: {"description":"TPR 15"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI31 |
| Number of Residues | 33 |
| Details | Repeat: {"description":"TPR 16"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI32 |
| Number of Residues | 34 |
| Details | Coiled coil: {"evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI33 |
| Number of Residues | 116 |
| Details | Domain: {"description":"TFIIS central","evidences":[{"source":"PROSITE-ProRule","id":"PRU00651","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI34 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00472","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"27193682","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5IY6","evidenceCode":"ECO:0000312"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI35 |
| Number of Residues | 43 |
| Details | Repeat: {"description":"WD 1"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI36 |
| Number of Residues | 39 |
| Details | Repeat: {"description":"WD 2"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI37 |
| Number of Residues | 39 |
| Details | Repeat: {"description":"WD 3"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI38 |
| Number of Residues | 41 |
| Details | Repeat: {"description":"WD 4"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI39 |
| Number of Residues | 39 |
| Details | Repeat: {"description":"WD 5"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI40 |
| Number of Residues | 39 |
| Details | Repeat: {"description":"WD 6"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI41 |
| Number of Residues | 38 |
| Details | Region: {"description":"Interaction with SUPT5H"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI42 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"28892040","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5OIK","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI43 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N-acetylalanine","evidences":[{"source":"PubMed","id":"22814378","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI45 |
| Number of Residues | 4 |
| Details | Modified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"UniProtKB","id":"P62805","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI46 |
| Number of Residues | 4 |
| Details | Modified residue: {"description":"N6-propionyllysine; alternate","evidences":[{"source":"UniProtKB","id":"P62805","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI47 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"Phosphoserine; by PAK2","evidences":[{"source":"UniProtKB","id":"P62805","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI48 |
| Number of Residues | 4 |
| Details | Modified residue: {"description":"Phosphotyrosine","evidences":[{"source":"UniProtKB","id":"P62805","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI49 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N6-glutaryllysine; alternate","evidences":[{"source":"UniProtKB","id":"P62805","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI50 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"P62805","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI51 |
| Number of Residues | 2 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in UFM1); alternate","evidences":[{"source":"UniProtKB","id":"P62805","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI52 |
| Number of Residues | 4 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate","evidences":[{"source":"UniProtKB","id":"P62805","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI53 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N6-(2-hydroxyisobutyryl)lysine; alternate","evidences":[{"source":"UniProtKB","id":"P0C0S8","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI54 |
| Number of Residues | 4 |
| Details | Modified residue: {"description":"N6-(2-hydroxyisobutyryl)lysine","evidences":[{"source":"UniProtKB","id":"P0C0S8","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI55 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"P0C0S8","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI56 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N5-methylglutamine","evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI57 |
| Number of Residues | 4 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI58 |
| Number of Residues | 2 |
| Details | Glycosylation: {"description":"O-linked (GlcNAc) serine","evidences":[{"source":"UniProtKB","id":"P62807","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI59 |
| Number of Residues | 4 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"UniProtKB","id":"P0C1H4","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI60 |
| Number of Residues | 54 |
| Details | Domain: {"description":"AWS","evidences":[{"source":"PROSITE-ProRule","id":"PRU00562","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI61 |
| Number of Residues | 117 |
| Details | Domain: {"description":"SET","evidences":[{"source":"PROSITE-ProRule","id":"PRU00190","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI62 |
| Number of Residues | 16 |
| Details | Domain: {"description":"Post-SET","evidences":[{"source":"PROSITE-ProRule","id":"PRU00155","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI63 |
| Number of Residues | 11 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"23043551","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"27474439","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"28256625","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4FMU","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4H12","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5JJY","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5JLB","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5JLE","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5V21","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5V22","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI64 |
| Number of Residues | 7 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"23043551","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"27474439","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"28256625","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4H12","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5JJY","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5JLB","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5JLE","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5V22","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |






