9DQY
Structure of western equine encephalitis virus Imperial 181 VLP in complex with house sparrow PCDH10 EC1
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0004252 | molecular_function | serine-type endopeptidase activity |
| A | 0019028 | cellular_component | viral capsid |
| A | 0055036 | cellular_component | virion membrane |
| B | 0005198 | molecular_function | structural molecule activity |
| B | 0019028 | cellular_component | viral capsid |
| C | 0004252 | molecular_function | serine-type endopeptidase activity |
| C | 0019028 | cellular_component | viral capsid |
| C | 0055036 | cellular_component | virion membrane |
| D | 0005198 | molecular_function | structural molecule activity |
| D | 0019028 | cellular_component | viral capsid |
| E | 0004252 | molecular_function | serine-type endopeptidase activity |
| E | 0019028 | cellular_component | viral capsid |
| E | 0055036 | cellular_component | virion membrane |
| F | 0005198 | molecular_function | structural molecule activity |
| F | 0019028 | cellular_component | viral capsid |
| G | 0005509 | molecular_function | calcium ion binding |
| G | 0005886 | cellular_component | plasma membrane |
| G | 0007155 | biological_process | cell adhesion |
| G | 0007156 | biological_process | homophilic cell-cell adhesion |
| G | 0016020 | cellular_component | membrane |
| H | 0005509 | molecular_function | calcium ion binding |
| H | 0005886 | cellular_component | plasma membrane |
| H | 0007155 | biological_process | cell adhesion |
| H | 0007156 | biological_process | homophilic cell-cell adhesion |
| H | 0016020 | cellular_component | membrane |
| I | 0005509 | molecular_function | calcium ion binding |
| I | 0005886 | cellular_component | plasma membrane |
| I | 0007155 | biological_process | cell adhesion |
| I | 0007156 | biological_process | homophilic cell-cell adhesion |
| I | 0016020 | cellular_component | membrane |
Functional Information from PROSITE/UniProt
| site_id | PS00232 |
| Number of Residues | 11 |
| Details | CADHERIN_1 Cadherin domain signature. IeVlDiNDNpP |
| Chain | Residue | Details |
| G | ILE92-PRO102 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 790 |
| Details | Topological domain: {"description":"Extracellular","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 120 |
| Details | Transmembrane: {"description":"Helical","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 51 |
| Details | Region: {"description":"E1 fusion peptide loop","evidences":[{"source":"UniProtKB","id":"Q8JUX5","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 12 |
| Details | Glycosylation: {"description":"N-linked (GlcNAc...) asparagine; by host","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 3 |
| Details | Glycosylation: {"description":"N-linked (GlcNAc...) asparagine; by host","evidences":[{"source":"UniProtKB","id":"Q5Y388","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 12 |
| Details | Region: {"description":"Interaction with the capsid protein","evidences":[{"source":"UniProtKB","id":"P03316","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI8 |
| Number of Residues | 3 |
| Details | Lipidation: {"description":"S-palmitoyl cysteine; by host","evidences":[{"source":"UniProtKB","id":"P03316","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
