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9DIE

Structure of phospholipase D BetaIB1i from Sicarius terrosus venom, H47N mutant bound to product and substrate sphingolipids at 1.85 A resolution

This is a non-PDB format compatible entry.
Functional Information from GO Data
ChainGOidnamespacecontents
A0005576cellular_componentextracellular region
A0006629biological_processlipid metabolic process
A0008081molecular_functionphosphoric diester hydrolase activity
B0005576cellular_componentextracellular region
B0006629biological_processlipid metabolic process
B0008081molecular_functionphosphoric diester hydrolase activity
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsActive site: {"evidences":[{"source":"UniProtKB","id":"Q8I914","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues2
DetailsActive site: {"description":"Nucleophile","evidences":[{"source":"UniProtKB","id":"Q8I914","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues6
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"25752604","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4Q6X","evidenceCode":"ECO:0000312"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues4
DetailsSite: {"description":"May prevent sphingomyelin recognition","evidences":[{"source":"PubMed","id":"16480957","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

251174

PDB entries from 2026-03-25

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