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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

9CFC

Cryo-EM structure of human kidney V-ATPase state 2

This is a non-PDB format compatible entry.
Functional Information from PROSITE/UniProt
site_idPS00152
Number of Residues10
DetailsATPASE_ALPHA_BETA ATP synthase alpha and beta subunits signature. PPINVLPSLS
ChainResidueDetails
DPRO390-SER399
APRO446-SER455
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues188
DetailsTopological domain: {"description":"Lumenal","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI2
Number of Residues1150
DetailsTransmembrane: {"description":"Helical","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI3
Number of Residues415
DetailsTopological domain: {"description":"Cytoplasmic","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI4
Number of Residues1
DetailsSite: {"description":"Essential for proton translocation","evidences":[{"source":"UniProtKB","id":"Q2TA24","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails
site_idSWS_FT_FI5
Number of Residues9
DetailsSite: {"description":"Essential for proton translocation","evidences":[{"source":"PubMed","id":"36074901","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI6
Number of Residues4
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI7
Number of Residues3
DetailsModified residue: {"description":"Phosphoserine; by AMPK","evidences":[{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI8
Number of Residues10
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"33065002","evidenceCode":"ECO:0000305"},{"source":"PDB","id":"6WLZ","evidenceCode":"ECO:0000312"},{"source":"PDB","id":"6WM2","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6WM3","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6WM4","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI9
Number of Residues3
DetailsModified residue: {"description":"Phosphotyrosine","evidences":[{"source":"UniProtKB","id":"P50518","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails
site_idSWS_FT_FI10
Number of Residues1
DetailsModified residue: {"description":"Phosphotyrosine","evidences":[{"source":"UniProtKB","id":"P51863","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails
site_idSWS_FT_FI11
Number of Residues1
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P51863","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails
site_idSWS_FT_FI12
Number of Residues83
DetailsTopological domain: {"description":"Vacuolar","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI13
Number of Residues1
DetailsModified residue: {"description":"Phosphotyrosine","evidences":[{"source":"UniProtKB","id":"Q9Z1G4","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails
site_idSWS_FT_FI14
Number of Residues1
DetailsGlycosylation: {"description":"N-linked (GalNAc...) asparagine","evidences":[{"source":"PubMed","id":"33065002","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6WM3","evidenceCode":"ECO:0000312"},{"source":"PDB","id":"6WM4","evidenceCode":"ECO:0000312"}]}
ChainResidueDetails
site_idSWS_FT_FI15
Number of Residues6
DetailsTopological domain: {"description":"Cytoplasmic","evidences":[{"evidenceCode":"ECO:0000305"}]}
ChainResidueDetails
site_idSWS_FT_FI16
Number of Residues1
DetailsGlycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"source":"PubMed","id":"33065002","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6WLW","evidenceCode":"ECO:0000312"},{"source":"PDB","id":"6WM2","evidenceCode":"ECO:0000312"},{"source":"PDB","id":"6WM3","evidenceCode":"ECO:0000312"},{"source":"PDB","id":"6WM4","evidenceCode":"ECO:0000312"}]}
ChainResidueDetails
site_idSWS_FT_FI17
Number of Residues2
DetailsGlycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"source":"PubMed","id":"19159218","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"33065002","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6WLW","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6WM2","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6WM3","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6WM4","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI18
Number of Residues1
DetailsGlycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"33065002","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6WM3","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6WM4","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI19
Number of Residues2
DetailsGlycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"source":"PubMed","id":"33065002","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6WLW","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6WM2","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6WM3","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6WM4","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI20
Number of Residues1
DetailsGlycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"source":"PubMed","id":"33065002","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6WM3","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6WM4","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

239803

PDB entries from 2025-08-06

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