Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9BRD

Synaptic Vesicle V-ATPase with synaptophysin and SidK, State 3

This is a non-PDB format compatible entry.
Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0000221cellular_componentvacuolar proton-transporting V-type ATPase, V1 domain
A0005515molecular_functionprotein binding
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0005886cellular_componentplasma membrane
A0005902cellular_componentmicrovillus
A0006811biological_processmonoatomic ion transport
A0006879biological_processintracellular iron ion homeostasis
A0016020cellular_componentmembrane
A0016324cellular_componentapical plasma membrane
A0016887molecular_functionATP hydrolysis activity
A0030141cellular_componentsecretory granule
A0030665cellular_componentclathrin-coated vesicle membrane
A0033176cellular_componentproton-transporting V-type ATPase complex
A0033180cellular_componentproton-transporting V-type ATPase, V1 domain
A0036295biological_processcellular response to increased oxygen levels
A0042592biological_processhomeostatic process
A0046034biological_processATP metabolic process
A0046961molecular_functionproton-transporting ATPase activity, rotational mechanism
A0097401biological_processsynaptic vesicle lumen acidification
A0098850cellular_componentextrinsic component of synaptic vesicle membrane
A1902600biological_processproton transmembrane transport
A1904949cellular_componentATPase complex
B0000166molecular_functionnucleotide binding
B0000221cellular_componentvacuolar proton-transporting V-type ATPase, V1 domain
B0005515molecular_functionprotein binding
B0005524molecular_functionATP binding
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0005886cellular_componentplasma membrane
B0005902cellular_componentmicrovillus
B0006811biological_processmonoatomic ion transport
B0006879biological_processintracellular iron ion homeostasis
B0016020cellular_componentmembrane
B0016324cellular_componentapical plasma membrane
B0016887molecular_functionATP hydrolysis activity
B0030141cellular_componentsecretory granule
B0030665cellular_componentclathrin-coated vesicle membrane
B0033176cellular_componentproton-transporting V-type ATPase complex
B0033180cellular_componentproton-transporting V-type ATPase, V1 domain
B0036295biological_processcellular response to increased oxygen levels
B0042592biological_processhomeostatic process
B0046034biological_processATP metabolic process
B0046961molecular_functionproton-transporting ATPase activity, rotational mechanism
B0097401biological_processsynaptic vesicle lumen acidification
B0098850cellular_componentextrinsic component of synaptic vesicle membrane
B1902600biological_processproton transmembrane transport
B1904949cellular_componentATPase complex
C0000166molecular_functionnucleotide binding
C0000221cellular_componentvacuolar proton-transporting V-type ATPase, V1 domain
C0005515molecular_functionprotein binding
C0005524molecular_functionATP binding
C0005737cellular_componentcytoplasm
C0005829cellular_componentcytosol
C0005886cellular_componentplasma membrane
C0005902cellular_componentmicrovillus
C0006811biological_processmonoatomic ion transport
C0006879biological_processintracellular iron ion homeostasis
C0016020cellular_componentmembrane
C0016324cellular_componentapical plasma membrane
C0016887molecular_functionATP hydrolysis activity
C0030141cellular_componentsecretory granule
C0030665cellular_componentclathrin-coated vesicle membrane
C0033176cellular_componentproton-transporting V-type ATPase complex
C0033180cellular_componentproton-transporting V-type ATPase, V1 domain
C0036295biological_processcellular response to increased oxygen levels
C0042592biological_processhomeostatic process
C0046034biological_processATP metabolic process
C0046961molecular_functionproton-transporting ATPase activity, rotational mechanism
C0097401biological_processsynaptic vesicle lumen acidification
C0098850cellular_componentextrinsic component of synaptic vesicle membrane
C1902600biological_processproton transmembrane transport
C1904949cellular_componentATPase complex
D0000166molecular_functionnucleotide binding
D0000221cellular_componentvacuolar proton-transporting V-type ATPase, V1 domain
D0001726cellular_componentruffle
D0005524molecular_functionATP binding
D0005737cellular_componentcytoplasm
D0005829cellular_componentcytosol
D0005886cellular_componentplasma membrane
D0005902cellular_componentmicrovillus
D0006811biological_processmonoatomic ion transport
D0007035biological_processvacuolar acidification
D0016020cellular_componentmembrane
D0016324cellular_componentapical plasma membrane
D0019725biological_processcellular homeostasis
D0030641biological_processregulation of cellular pH
D0030665cellular_componentclathrin-coated vesicle membrane
D0030672cellular_componentsynaptic vesicle membrane
D0031410cellular_componentcytoplasmic vesicle
D0033180cellular_componentproton-transporting V-type ATPase, V1 domain
D0042470cellular_componentmelanosome
D0043231cellular_componentintracellular membrane-bounded organelle
D0045202cellular_componentsynapse
D0046034biological_processATP metabolic process
D0046961molecular_functionproton-transporting ATPase activity, rotational mechanism
D0097401biological_processsynaptic vesicle lumen acidification
D0098850cellular_componentextrinsic component of synaptic vesicle membrane
D1902600biological_processproton transmembrane transport
E0000166molecular_functionnucleotide binding
E0000221cellular_componentvacuolar proton-transporting V-type ATPase, V1 domain
E0001726cellular_componentruffle
E0005524molecular_functionATP binding
E0005737cellular_componentcytoplasm
E0005829cellular_componentcytosol
E0005886cellular_componentplasma membrane
E0005902cellular_componentmicrovillus
E0006811biological_processmonoatomic ion transport
E0007035biological_processvacuolar acidification
E0016020cellular_componentmembrane
E0016324cellular_componentapical plasma membrane
E0019725biological_processcellular homeostasis
E0030641biological_processregulation of cellular pH
E0030665cellular_componentclathrin-coated vesicle membrane
E0030672cellular_componentsynaptic vesicle membrane
E0031410cellular_componentcytoplasmic vesicle
E0033180cellular_componentproton-transporting V-type ATPase, V1 domain
E0042470cellular_componentmelanosome
E0043231cellular_componentintracellular membrane-bounded organelle
E0045202cellular_componentsynapse
E0046034biological_processATP metabolic process
E0046961molecular_functionproton-transporting ATPase activity, rotational mechanism
E0097401biological_processsynaptic vesicle lumen acidification
E0098850cellular_componentextrinsic component of synaptic vesicle membrane
E1902600biological_processproton transmembrane transport
F0000166molecular_functionnucleotide binding
F0000221cellular_componentvacuolar proton-transporting V-type ATPase, V1 domain
F0001726cellular_componentruffle
F0005524molecular_functionATP binding
F0005737cellular_componentcytoplasm
F0005829cellular_componentcytosol
F0005886cellular_componentplasma membrane
F0005902cellular_componentmicrovillus
F0006811biological_processmonoatomic ion transport
F0007035biological_processvacuolar acidification
F0016020cellular_componentmembrane
F0016324cellular_componentapical plasma membrane
F0019725biological_processcellular homeostasis
F0030641biological_processregulation of cellular pH
F0030665cellular_componentclathrin-coated vesicle membrane
F0030672cellular_componentsynaptic vesicle membrane
F0031410cellular_componentcytoplasmic vesicle
F0033180cellular_componentproton-transporting V-type ATPase, V1 domain
F0042470cellular_componentmelanosome
F0043231cellular_componentintracellular membrane-bounded organelle
F0045202cellular_componentsynapse
F0046034biological_processATP metabolic process
F0046961molecular_functionproton-transporting ATPase activity, rotational mechanism
F0097401biological_processsynaptic vesicle lumen acidification
F0098850cellular_componentextrinsic component of synaptic vesicle membrane
F1902600biological_processproton transmembrane transport
G0000221cellular_componentvacuolar proton-transporting V-type ATPase, V1 domain
G0005886cellular_componentplasma membrane
G0006811biological_processmonoatomic ion transport
G0008150biological_processbiological_process
G0015078molecular_functionproton transmembrane transporter activity
G0016020cellular_componentmembrane
G0030665cellular_componentclathrin-coated vesicle membrane
G0030672cellular_componentsynaptic vesicle membrane
G0031410cellular_componentcytoplasmic vesicle
G0033176cellular_componentproton-transporting V-type ATPase complex
G0033180cellular_componentproton-transporting V-type ATPase, V1 domain
G0045177cellular_componentapical part of cell
G0045202cellular_componentsynapse
G0046961molecular_functionproton-transporting ATPase activity, rotational mechanism
G0097401biological_processsynaptic vesicle lumen acidification
G0098850cellular_componentextrinsic component of synaptic vesicle membrane
G1902600biological_processproton transmembrane transport
G1904949cellular_componentATPase complex
H0005813cellular_componentcentrosome
H0005929cellular_componentcilium
H0006811biological_processmonoatomic ion transport
H0016020cellular_componentmembrane
H0030030biological_processcell projection organization
H0030665cellular_componentclathrin-coated vesicle membrane
H0033176cellular_componentproton-transporting V-type ATPase complex
H0046961molecular_functionproton-transporting ATPase activity, rotational mechanism
H0060271biological_processcilium assembly
H0061512biological_processprotein localization to cilium
H0097401biological_processsynaptic vesicle lumen acidification
H0098850cellular_componentextrinsic component of synaptic vesicle membrane
H1902600biological_processproton transmembrane transport
I0000221cellular_componentvacuolar proton-transporting V-type ATPase, V1 domain
I0005737cellular_componentcytoplasm
I0005768cellular_componentendosome
I0005829cellular_componentcytosol
I0005886cellular_componentplasma membrane
I0005902cellular_componentmicrovillus
I0006811biological_processmonoatomic ion transport
I0016020cellular_componentmembrane
I0016324cellular_componentapical plasma membrane
I0030665cellular_componentclathrin-coated vesicle membrane
I0030672cellular_componentsynaptic vesicle membrane
I0031410cellular_componentcytoplasmic vesicle
I0033178cellular_componentproton-transporting two-sector ATPase complex, catalytic domain
I0045202cellular_componentsynapse
I0046961molecular_functionproton-transporting ATPase activity, rotational mechanism
I0051117molecular_functionATPase binding
I0097401biological_processsynaptic vesicle lumen acidification
I0098850cellular_componentextrinsic component of synaptic vesicle membrane
I1902600biological_processproton transmembrane transport
J0000221cellular_componentvacuolar proton-transporting V-type ATPase, V1 domain
J0005737cellular_componentcytoplasm
J0005768cellular_componentendosome
J0005829cellular_componentcytosol
J0005886cellular_componentplasma membrane
J0005902cellular_componentmicrovillus
J0006811biological_processmonoatomic ion transport
J0016020cellular_componentmembrane
J0016324cellular_componentapical plasma membrane
J0030665cellular_componentclathrin-coated vesicle membrane
J0030672cellular_componentsynaptic vesicle membrane
J0031410cellular_componentcytoplasmic vesicle
J0033178cellular_componentproton-transporting two-sector ATPase complex, catalytic domain
J0045202cellular_componentsynapse
J0046961molecular_functionproton-transporting ATPase activity, rotational mechanism
J0051117molecular_functionATPase binding
J0097401biological_processsynaptic vesicle lumen acidification
J0098850cellular_componentextrinsic component of synaptic vesicle membrane
J1902600biological_processproton transmembrane transport
K0000221cellular_componentvacuolar proton-transporting V-type ATPase, V1 domain
K0005737cellular_componentcytoplasm
K0005768cellular_componentendosome
K0005829cellular_componentcytosol
K0005886cellular_componentplasma membrane
K0005902cellular_componentmicrovillus
K0006811biological_processmonoatomic ion transport
K0016020cellular_componentmembrane
K0016324cellular_componentapical plasma membrane
K0030665cellular_componentclathrin-coated vesicle membrane
K0030672cellular_componentsynaptic vesicle membrane
K0031410cellular_componentcytoplasmic vesicle
K0033178cellular_componentproton-transporting two-sector ATPase complex, catalytic domain
K0045202cellular_componentsynapse
K0046961molecular_functionproton-transporting ATPase activity, rotational mechanism
K0051117molecular_functionATPase binding
K0097401biological_processsynaptic vesicle lumen acidification
K0098850cellular_componentextrinsic component of synaptic vesicle membrane
K1902600biological_processproton transmembrane transport
L0000221cellular_componentvacuolar proton-transporting V-type ATPase, V1 domain
L0006811biological_processmonoatomic ion transport
L0016020cellular_componentmembrane
L0016471cellular_componentvacuolar proton-transporting V-type ATPase complex
L0030665cellular_componentclathrin-coated vesicle membrane
L0030672cellular_componentsynaptic vesicle membrane
L0031410cellular_componentcytoplasmic vesicle
L0033176cellular_componentproton-transporting V-type ATPase complex
L0033180cellular_componentproton-transporting V-type ATPase, V1 domain
L0034220biological_processmonoatomic ion transmembrane transport
L0045202cellular_componentsynapse
L0046961molecular_functionproton-transporting ATPase activity, rotational mechanism
L0097401biological_processsynaptic vesicle lumen acidification
L0098850cellular_componentextrinsic component of synaptic vesicle membrane
L1902600biological_processproton transmembrane transport
M0000221cellular_componentvacuolar proton-transporting V-type ATPase, V1 domain
M0006811biological_processmonoatomic ion transport
M0008553molecular_functionP-type proton-exporting transporter activity
M0012505cellular_componentendomembrane system
M0016471cellular_componentvacuolar proton-transporting V-type ATPase complex
M0016887molecular_functionATP hydrolysis activity
M0030672cellular_componentsynaptic vesicle membrane
M0046961molecular_functionproton-transporting ATPase activity, rotational mechanism
M0097401biological_processsynaptic vesicle lumen acidification
M0098850cellular_componentextrinsic component of synaptic vesicle membrane
M1902600biological_processproton transmembrane transport
N0000221cellular_componentvacuolar proton-transporting V-type ATPase, V1 domain
N0006811biological_processmonoatomic ion transport
N0008553molecular_functionP-type proton-exporting transporter activity
N0012505cellular_componentendomembrane system
N0016471cellular_componentvacuolar proton-transporting V-type ATPase complex
N0016887molecular_functionATP hydrolysis activity
N0030672cellular_componentsynaptic vesicle membrane
N0046961molecular_functionproton-transporting ATPase activity, rotational mechanism
N0097401biological_processsynaptic vesicle lumen acidification
N0098850cellular_componentextrinsic component of synaptic vesicle membrane
N1902600biological_processproton transmembrane transport
O0000221cellular_componentvacuolar proton-transporting V-type ATPase, V1 domain
O0006811biological_processmonoatomic ion transport
O0008553molecular_functionP-type proton-exporting transporter activity
O0012505cellular_componentendomembrane system
O0016471cellular_componentvacuolar proton-transporting V-type ATPase complex
O0016887molecular_functionATP hydrolysis activity
O0030672cellular_componentsynaptic vesicle membrane
O0046961molecular_functionproton-transporting ATPase activity, rotational mechanism
O0097401biological_processsynaptic vesicle lumen acidification
O0098850cellular_componentextrinsic component of synaptic vesicle membrane
O1902600biological_processproton transmembrane transport
Q0005515molecular_functionprotein binding
Q0141159biological_processsymbiont-mediated suppression of host phagosome acidification
R0005515molecular_functionprotein binding
R0141159biological_processsymbiont-mediated suppression of host phagosome acidification
S0005515molecular_functionprotein binding
S0141159biological_processsymbiont-mediated suppression of host phagosome acidification
T0000221cellular_componentvacuolar proton-transporting V-type ATPase, V1 domain
T0006811biological_processmonoatomic ion transport
T0006897biological_processendocytosis
T0016020cellular_componentmembrane
T0030665cellular_componentclathrin-coated vesicle membrane
T0033176cellular_componentproton-transporting V-type ATPase complex
T0046961molecular_functionproton-transporting ATPase activity, rotational mechanism
T0097401biological_processsynaptic vesicle lumen acidification
T0098850cellular_componentextrinsic component of synaptic vesicle membrane
T1902600biological_processproton transmembrane transport
U0000149molecular_functionSNARE binding
U0005515molecular_functionprotein binding
U0006897biological_processendocytosis
U0008021cellular_componentsynaptic vesicle
U0010807biological_processregulation of synaptic vesicle priming
U0014069cellular_componentpostsynaptic density
U0015485molecular_functioncholesterol binding
U0016020cellular_componentmembrane
U0017075molecular_functionsyntaxin-1 binding
U0019904molecular_functionprotein domain specific binding
U0030672cellular_componentsynaptic vesicle membrane
U0031410cellular_componentcytoplasmic vesicle
U0031594cellular_componentneuromuscular junction
U0032991cellular_componentprotein-containing complex
U0042169molecular_functionSH2 domain binding
U0042734cellular_componentpresynaptic membrane
U0042802molecular_functionidentical protein binding
U0043005cellular_componentneuron projection
U0043195cellular_componentterminal bouton
U0044306cellular_componentneuron projection terminus
U0044309cellular_componentneuron spine
U0044877molecular_functionprotein-containing complex binding
U0045202cellular_componentsynapse
U0048168biological_processregulation of neuronal synaptic plasticity
U0048169biological_processregulation of long-term neuronal synaptic plasticity
U0048172biological_processregulation of short-term neuronal synaptic plasticity
U0048471cellular_componentperinuclear region of cytoplasm
U0048786cellular_componentpresynaptic active zone
U0050804biological_processmodulation of chemical synaptic transmission
U0060076cellular_componentexcitatory synapse
U0098685cellular_componentSchaffer collateral - CA1 synapse
U0098793cellular_componentpresynapse
U1904645biological_processresponse to amyloid-beta
U2000474biological_processregulation of opioid receptor signaling pathway
a0000220cellular_componentvacuolar proton-transporting V-type ATPase, V0 domain
a0005737cellular_componentcytoplasm
a0005886cellular_componentplasma membrane
a0006811biological_processmonoatomic ion transport
a0007035biological_processvacuolar acidification
a0008150biological_processbiological_process
a0016020cellular_componentmembrane
a0016241biological_processregulation of macroautophagy
a0016471cellular_componentvacuolar proton-transporting V-type ATPase complex
a0030665cellular_componentclathrin-coated vesicle membrane
a0030672cellular_componentsynaptic vesicle membrane
a0031410cellular_componentcytoplasmic vesicle
a0033179cellular_componentproton-transporting V-type ATPase, V0 domain
a0042470cellular_componentmelanosome
a0043195cellular_componentterminal bouton
a0045202cellular_componentsynapse
a0046961molecular_functionproton-transporting ATPase activity, rotational mechanism
a0048471cellular_componentperinuclear region of cytoplasm
a0051117molecular_functionATPase binding
a0097401biological_processsynaptic vesicle lumen acidification
a1902600biological_processproton transmembrane transport
b0005768cellular_componentendosome
b0006811biological_processmonoatomic ion transport
b0015078molecular_functionproton transmembrane transporter activity
b0016020cellular_componentmembrane
b0030665cellular_componentclathrin-coated vesicle membrane
b0033176cellular_componentproton-transporting V-type ATPase complex
b0033177cellular_componentproton-transporting two-sector ATPase complex, proton-transporting domain
b0033179cellular_componentproton-transporting V-type ATPase, V0 domain
b0046961molecular_functionproton-transporting ATPase activity, rotational mechanism
b1902600biological_processproton transmembrane transport
d0005765cellular_componentlysosomal membrane
d0005769cellular_componentearly endosome
d0005813cellular_componentcentrosome
d0006811biological_processmonoatomic ion transport
d0006879biological_processintracellular iron ion homeostasis
d0008021cellular_componentsynaptic vesicle
d0016020cellular_componentmembrane
d0016324cellular_componentapical plasma membrane
d0016471cellular_componentvacuolar proton-transporting V-type ATPase complex
d0030665cellular_componentclathrin-coated vesicle membrane
d0030672cellular_componentsynaptic vesicle membrane
d0032991cellular_componentprotein-containing complex
d0033176cellular_componentproton-transporting V-type ATPase complex
d0033179cellular_componentproton-transporting V-type ATPase, V0 domain
d0036295biological_processcellular response to increased oxygen levels
d0042592biological_processhomeostatic process
d0043679cellular_componentaxon terminus
d0044877molecular_functionprotein-containing complex binding
d0046961molecular_functionproton-transporting ATPase activity, rotational mechanism
d0097401biological_processsynaptic vesicle lumen acidification
d1902600biological_processproton transmembrane transport
e0000220cellular_componentvacuolar proton-transporting V-type ATPase, V0 domain
e0006811biological_processmonoatomic ion transport
e0016020cellular_componentmembrane
e0030665cellular_componentclathrin-coated vesicle membrane
e0030672cellular_componentsynaptic vesicle membrane
e0031410cellular_componentcytoplasmic vesicle
e0033179cellular_componentproton-transporting V-type ATPase, V0 domain
e0045202cellular_componentsynapse
e0046961molecular_functionproton-transporting ATPase activity, rotational mechanism
e0055085biological_processtransmembrane transport
e0097401biological_processsynaptic vesicle lumen acidification
e1902600biological_processproton transmembrane transport
f0004521molecular_functionRNA endonuclease activity
f0090304biological_processnucleic acid metabolic process
g0000220cellular_componentvacuolar proton-transporting V-type ATPase, V0 domain
g0006811biological_processmonoatomic ion transport
g0008021cellular_componentsynaptic vesicle
g0015078molecular_functionproton transmembrane transporter activity
g0016020cellular_componentmembrane
g0030177biological_processpositive regulation of Wnt signaling pathway
g0030665cellular_componentclathrin-coated vesicle membrane
g0030672cellular_componentsynaptic vesicle membrane
g0031410cellular_componentcytoplasmic vesicle
g0031625molecular_functionubiquitin protein ligase binding
g0033176cellular_componentproton-transporting V-type ATPase complex
g0033177cellular_componentproton-transporting two-sector ATPase complex, proton-transporting domain
g0033179cellular_componentproton-transporting V-type ATPase, V0 domain
g0045202cellular_componentsynapse
g0046961molecular_functionproton-transporting ATPase activity, rotational mechanism
g0070374biological_processpositive regulation of ERK1 and ERK2 cascade
g0097401biological_processsynaptic vesicle lumen acidification
g0098588cellular_componentbounding membrane of organelle
g1902600biological_processproton transmembrane transport
g1904093biological_processnegative regulation of autophagic cell death
h0000220cellular_componentvacuolar proton-transporting V-type ATPase, V0 domain
h0006811biological_processmonoatomic ion transport
h0008021cellular_componentsynaptic vesicle
h0015078molecular_functionproton transmembrane transporter activity
h0016020cellular_componentmembrane
h0030177biological_processpositive regulation of Wnt signaling pathway
h0030665cellular_componentclathrin-coated vesicle membrane
h0030672cellular_componentsynaptic vesicle membrane
h0031410cellular_componentcytoplasmic vesicle
h0031625molecular_functionubiquitin protein ligase binding
h0033176cellular_componentproton-transporting V-type ATPase complex
h0033177cellular_componentproton-transporting two-sector ATPase complex, proton-transporting domain
h0033179cellular_componentproton-transporting V-type ATPase, V0 domain
h0045202cellular_componentsynapse
h0046961molecular_functionproton-transporting ATPase activity, rotational mechanism
h0070374biological_processpositive regulation of ERK1 and ERK2 cascade
h0097401biological_processsynaptic vesicle lumen acidification
h0098588cellular_componentbounding membrane of organelle
h1902600biological_processproton transmembrane transport
h1904093biological_processnegative regulation of autophagic cell death
i0000220cellular_componentvacuolar proton-transporting V-type ATPase, V0 domain
i0006811biological_processmonoatomic ion transport
i0008021cellular_componentsynaptic vesicle
i0015078molecular_functionproton transmembrane transporter activity
i0016020cellular_componentmembrane
i0030177biological_processpositive regulation of Wnt signaling pathway
i0030665cellular_componentclathrin-coated vesicle membrane
i0030672cellular_componentsynaptic vesicle membrane
i0031410cellular_componentcytoplasmic vesicle
i0031625molecular_functionubiquitin protein ligase binding
i0033176cellular_componentproton-transporting V-type ATPase complex
i0033177cellular_componentproton-transporting two-sector ATPase complex, proton-transporting domain
i0033179cellular_componentproton-transporting V-type ATPase, V0 domain
i0045202cellular_componentsynapse
i0046961molecular_functionproton-transporting ATPase activity, rotational mechanism
i0070374biological_processpositive regulation of ERK1 and ERK2 cascade
i0097401biological_processsynaptic vesicle lumen acidification
i0098588cellular_componentbounding membrane of organelle
i1902600biological_processproton transmembrane transport
i1904093biological_processnegative regulation of autophagic cell death
j0000220cellular_componentvacuolar proton-transporting V-type ATPase, V0 domain
j0006811biological_processmonoatomic ion transport
j0008021cellular_componentsynaptic vesicle
j0015078molecular_functionproton transmembrane transporter activity
j0016020cellular_componentmembrane
j0030177biological_processpositive regulation of Wnt signaling pathway
j0030665cellular_componentclathrin-coated vesicle membrane
j0030672cellular_componentsynaptic vesicle membrane
j0031410cellular_componentcytoplasmic vesicle
j0031625molecular_functionubiquitin protein ligase binding
j0033176cellular_componentproton-transporting V-type ATPase complex
j0033177cellular_componentproton-transporting two-sector ATPase complex, proton-transporting domain
j0033179cellular_componentproton-transporting V-type ATPase, V0 domain
j0045202cellular_componentsynapse
j0046961molecular_functionproton-transporting ATPase activity, rotational mechanism
j0070374biological_processpositive regulation of ERK1 and ERK2 cascade
j0097401biological_processsynaptic vesicle lumen acidification
j0098588cellular_componentbounding membrane of organelle
j1902600biological_processproton transmembrane transport
j1904093biological_processnegative regulation of autophagic cell death
k0000220cellular_componentvacuolar proton-transporting V-type ATPase, V0 domain
k0006811biological_processmonoatomic ion transport
k0008021cellular_componentsynaptic vesicle
k0015078molecular_functionproton transmembrane transporter activity
k0016020cellular_componentmembrane
k0030177biological_processpositive regulation of Wnt signaling pathway
k0030665cellular_componentclathrin-coated vesicle membrane
k0030672cellular_componentsynaptic vesicle membrane
k0031410cellular_componentcytoplasmic vesicle
k0031625molecular_functionubiquitin protein ligase binding
k0033176cellular_componentproton-transporting V-type ATPase complex
k0033177cellular_componentproton-transporting two-sector ATPase complex, proton-transporting domain
k0033179cellular_componentproton-transporting V-type ATPase, V0 domain
k0045202cellular_componentsynapse
k0046961molecular_functionproton-transporting ATPase activity, rotational mechanism
k0070374biological_processpositive regulation of ERK1 and ERK2 cascade
k0097401biological_processsynaptic vesicle lumen acidification
k0098588cellular_componentbounding membrane of organelle
k1902600biological_processproton transmembrane transport
k1904093biological_processnegative regulation of autophagic cell death
l0000220cellular_componentvacuolar proton-transporting V-type ATPase, V0 domain
l0006811biological_processmonoatomic ion transport
l0008021cellular_componentsynaptic vesicle
l0015078molecular_functionproton transmembrane transporter activity
l0016020cellular_componentmembrane
l0030177biological_processpositive regulation of Wnt signaling pathway
l0030665cellular_componentclathrin-coated vesicle membrane
l0030672cellular_componentsynaptic vesicle membrane
l0031410cellular_componentcytoplasmic vesicle
l0031625molecular_functionubiquitin protein ligase binding
l0033176cellular_componentproton-transporting V-type ATPase complex
l0033177cellular_componentproton-transporting two-sector ATPase complex, proton-transporting domain
l0033179cellular_componentproton-transporting V-type ATPase, V0 domain
l0045202cellular_componentsynapse
l0046961molecular_functionproton-transporting ATPase activity, rotational mechanism
l0070374biological_processpositive regulation of ERK1 and ERK2 cascade
l0097401biological_processsynaptic vesicle lumen acidification
l0098588cellular_componentbounding membrane of organelle
l1902600biological_processproton transmembrane transport
l1904093biological_processnegative regulation of autophagic cell death
m0000220cellular_componentvacuolar proton-transporting V-type ATPase, V0 domain
m0006811biological_processmonoatomic ion transport
m0008021cellular_componentsynaptic vesicle
m0015078molecular_functionproton transmembrane transporter activity
m0016020cellular_componentmembrane
m0030177biological_processpositive regulation of Wnt signaling pathway
m0030665cellular_componentclathrin-coated vesicle membrane
m0030672cellular_componentsynaptic vesicle membrane
m0031410cellular_componentcytoplasmic vesicle
m0031625molecular_functionubiquitin protein ligase binding
m0033176cellular_componentproton-transporting V-type ATPase complex
m0033177cellular_componentproton-transporting two-sector ATPase complex, proton-transporting domain
m0033179cellular_componentproton-transporting V-type ATPase, V0 domain
m0045202cellular_componentsynapse
m0046961molecular_functionproton-transporting ATPase activity, rotational mechanism
m0070374biological_processpositive regulation of ERK1 and ERK2 cascade
m0097401biological_processsynaptic vesicle lumen acidification
m0098588cellular_componentbounding membrane of organelle
m1902600biological_processproton transmembrane transport
m1904093biological_processnegative regulation of autophagic cell death
n0000220cellular_componentvacuolar proton-transporting V-type ATPase, V0 domain
n0006811biological_processmonoatomic ion transport
n0008021cellular_componentsynaptic vesicle
n0015078molecular_functionproton transmembrane transporter activity
n0016020cellular_componentmembrane
n0030177biological_processpositive regulation of Wnt signaling pathway
n0030665cellular_componentclathrin-coated vesicle membrane
n0030672cellular_componentsynaptic vesicle membrane
n0031410cellular_componentcytoplasmic vesicle
n0031625molecular_functionubiquitin protein ligase binding
n0033176cellular_componentproton-transporting V-type ATPase complex
n0033177cellular_componentproton-transporting two-sector ATPase complex, proton-transporting domain
n0033179cellular_componentproton-transporting V-type ATPase, V0 domain
n0045202cellular_componentsynapse
n0046961molecular_functionproton-transporting ATPase activity, rotational mechanism
n0070374biological_processpositive regulation of ERK1 and ERK2 cascade
n0097401biological_processsynaptic vesicle lumen acidification
n0098588cellular_componentbounding membrane of organelle
n1902600biological_processproton transmembrane transport
n1904093biological_processnegative regulation of autophagic cell death
o0000220cellular_componentvacuolar proton-transporting V-type ATPase, V0 domain
o0006811biological_processmonoatomic ion transport
o0008021cellular_componentsynaptic vesicle
o0015078molecular_functionproton transmembrane transporter activity
o0016020cellular_componentmembrane
o0030177biological_processpositive regulation of Wnt signaling pathway
o0030665cellular_componentclathrin-coated vesicle membrane
o0030672cellular_componentsynaptic vesicle membrane
o0031410cellular_componentcytoplasmic vesicle
o0031625molecular_functionubiquitin protein ligase binding
o0033176cellular_componentproton-transporting V-type ATPase complex
o0033177cellular_componentproton-transporting two-sector ATPase complex, proton-transporting domain
o0033179cellular_componentproton-transporting V-type ATPase, V0 domain
o0045202cellular_componentsynapse
o0046961molecular_functionproton-transporting ATPase activity, rotational mechanism
o0070374biological_processpositive regulation of ERK1 and ERK2 cascade
o0097401biological_processsynaptic vesicle lumen acidification
o0098588cellular_componentbounding membrane of organelle
o1902600biological_processproton transmembrane transport
o1904093biological_processnegative regulation of autophagic cell death
p0016020cellular_componentmembrane
p0038023molecular_functionsignaling receptor activity
Functional Information from PROSITE/UniProt
site_idPS00152
Number of Residues10
DetailsATPASE_ALPHA_BETA ATP synthase alpha and beta subunits signature. PPINVLPSLS
ChainResidueDetails
DPRO390-SER399
APRO446-SER455

site_idPS00604
Number of Residues9
DetailsSYNAPTOP Synaptophysin / synaptoporin signature. LSVECaNKT
ChainResidueDetails
ULEU47-THR55

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI5
Number of Residues3
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"32165585","evidenceCode":"ECO:0000305"},{"source":"PDB","id":"6VQ6","evidenceCode":"ECO:0000312"},{"source":"PDB","id":"6VQ9","evidenceCode":"ECO:0000312"},{"source":"PDB","id":"6VQ7","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6VQ8","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6VQA","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6VQB","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues1
DetailsModified residue: {"description":"N-acetylthreonine","evidences":[{"source":"UniProtKB","id":"P21283","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues1
DetailsModified residue: {"description":"N-acetylalanine","evidences":[{"source":"UniProtKB","id":"P36543","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI8
Number of Residues3
DetailsModified residue: {"description":"Phosphotyrosine","evidences":[{"source":"UniProtKB","id":"P50518","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI12
Number of Residues1102
DetailsTransmembrane: {"description":"Helical","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI13
Number of Residues8
DetailsGlycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI15
Number of Residues94
DetailsTopological domain: {"description":"Vesicular","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI16
Number of Residues370
DetailsTopological domain: {"description":"Cytoplasmic","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI17
Number of Residues207
DetailsDomain: {"description":"MARVEL","evidences":[{"source":"PROSITE-ProRule","id":"PRU00581","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI18
Number of Residues1
DetailsModified residue: {"description":"Phosphotyrosine","evidences":[{"source":"PubMed","id":"22673903","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI19
Number of Residues1
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI20
Number of Residues128
DetailsTopological domain: {"description":"Vacuolar","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI21
Number of Residues1
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"Q9Z1G4","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI22
Number of Residues1
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"Q93050","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI23
Number of Residues1
DetailsModified residue: {"description":"Phosphotyrosine","evidences":[{"source":"UniProtKB","id":"Q9Z1G4","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI26
Number of Residues6
DetailsTopological domain: {"description":"Cytoplasmic","evidences":[{"evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI27
Number of Residues24
DetailsTopological domain: {"description":"Lumenal","evidences":[{"evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI28
Number of Residues1
DetailsGlycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"source":"PubMed","id":"24090084","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI30
Number of Residues153
DetailsTopological domain: {"description":"Lumenal","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI31
Number of Residues9
DetailsSite: {"description":"Essential for proton translocation","evidences":[{"source":"PubMed","id":"32165585","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

238582

PDB entries from 2025-07-09

PDB statisticsPDBj update infoContact PDBjnumon