9B5F
Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (doubly Ub-loaded) - cluster 1 map and model (Ub(A)/ATP/Mg)
This is a non-PDB format compatible entry.
Functional Information from PROSITE/UniProt
site_id | PS00183 |
Number of Residues | 16 |
Details | UBC_1 Ubiquitin-conjugating (UBC) active site signature. YHPNInsn.GsICLdiL |
Chain | Residue | Details |
C | TYR74-LEU89 |
site_id | PS00299 |
Number of Residues | 26 |
Details | UBIQUITIN_1 Ubiquitin domain signature. KskIqDkegIPpdqQrLIFaGkqleD |
Chain | Residue | Details |
D | LYS105-ASP130 | |
B | LYS27-ASP52 |
site_id | PS00865 |
Number of Residues | 9 |
Details | UBIQUITIN_ACTIVAT_2 Ubiquitin-activating enzyme active site. PICTLKnFP |
Chain | Residue | Details |
A | PRO591-PRO599 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 4 |
Details | CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) |
Chain | Residue | Details |
D | LYS84 | |
D | LYS89 | |
D | LYS105 | |
D | LYS111 |
site_id | SWS_FT_FI2 |
Number of Residues | 4 |
Details | CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250 |
Chain | Residue | Details |
A | ARG22 | |
D | LYS107 | |
D | LYS126 | |
D | LYS141 | |
A | VAL513 | |
A | ASP537 |
site_id | SWS_FT_FI3 |
Number of Residues | 3 |
Details | CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250 |
Chain | Residue | Details |
B | LYS29 | |
B | LYS48 | |
B | LYS63 |