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8YB5

SARS-CoV-2 DMV nsp3-4 pore complex (consensus-pore, C6 symmetry)

Functional Information from GO Data
ChainGOidnamespacecontents
A0002151molecular_functionG-quadruplex RNA binding
A0003676molecular_functionnucleic acid binding
A0003727molecular_functionsingle-stranded RNA binding
A0006508biological_processproteolysis
A0008234molecular_functioncysteine-type peptidase activity
B0002151molecular_functionG-quadruplex RNA binding
B0003676molecular_functionnucleic acid binding
B0003727molecular_functionsingle-stranded RNA binding
B0006508biological_processproteolysis
B0008234molecular_functioncysteine-type peptidase activity
Functional Information from PROSITE/UniProt
site_idPS00867
Number of Residues8
DetailsCPSASE_2 Carbamoyl-phosphate synthase subdomain signature 2. VLECNVKT
ChainResidueDetails
AVAL1243-THR1250

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues646
DetailsTopological domain: {"description":"Lumenal","evidences":[{"evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues180
DetailsTransmembrane: {"description":"Helical","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues140
DetailsDomain: {"description":"3Ecto","evidences":[{"source":"PROSITE-ProRule","id":"PRU01337","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues180
DetailsRegion: {"description":"Y1","evidences":[{"source":"PROSITE-ProRule","id":"PRU01336","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues26
DetailsRegion: {"description":"ZF1","evidences":[{"source":"PROSITE-ProRule","id":"PRU01336","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues20
DetailsRegion: {"description":"ZF2","evidences":[{"source":"PROSITE-ProRule","id":"PRU01336","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues188
DetailsRegion: {"description":"Y2","evidences":[{"source":"PROSITE-ProRule","id":"PRU01336","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI8
Number of Residues16
DetailsBinding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU01336","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI9
Number of Residues66
DetailsTopological domain: {"description":"Cytoplasmic","evidences":[{"evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

239492

PDB entries from 2025-07-30

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