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8XZ2

The structural model of a homodimeric D-Ala-D-Ala metallopeptidase, VanX, from vancomycin-resistant bacteria

Functional Information from GO Data
ChainGOidnamespacecontents
B0006508biological_processproteolysis
B0008237molecular_functionmetallopeptidase activity
B0008270molecular_functionzinc ion binding
B0016805molecular_functiondipeptidase activity
B0046677biological_processresponse to antibiotic
B0046872molecular_functionmetal ion binding
B0071555biological_processcell wall organization
C0006508biological_processproteolysis
C0008237molecular_functionmetallopeptidase activity
C0008270molecular_functionzinc ion binding
C0016805molecular_functiondipeptidase activity
C0046677biological_processresponse to antibiotic
C0046872molecular_functionmetal ion binding
C0071555biological_processcell wall organization
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Proton donor/acceptor => ECO:0000305|PubMed:9702193
ChainResidueDetails
BGLU181
CGLU181

site_idSWS_FT_FI2
Number of Residues6
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_01924, ECO:0000269|PubMed:9702193
ChainResidueDetails
BHIS116
BASP123
BHIS184
CHIS116
CASP123
CHIS184

site_idSWS_FT_FI3
Number of Residues2
DetailsSITE: Transition state stabilizer => ECO:0000305
ChainResidueDetails
BARG71
CARG71

Catalytic Information from CSA
site_idMCSA1
Number of Residues5
DetailsM-CSA 706
ChainResidueDetails
BARG71electrostatic stabiliser
BHIS116metal ligand
BASP123metal ligand
BGLU181proton acceptor, proton donor
BHIS184metal ligand

site_idMCSA2
Number of Residues5
DetailsM-CSA 706
ChainResidueDetails
CARG71electrostatic stabiliser
CHIS116metal ligand
CASP123metal ligand
CGLU181proton acceptor, proton donor
CHIS184metal ligand

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PDB entries from 2024-07-17

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