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8XZ2

The structural model of a homodimeric D-Ala-D-Ala metallopeptidase, VanX, from vancomycin-resistant bacteria

Functional Information from GO Data
ChainGOidnamespacecontents
B0006508biological_processproteolysis
B0008233molecular_functionpeptidase activity
B0008237molecular_functionmetallopeptidase activity
B0008270molecular_functionzinc ion binding
B0016787molecular_functionhydrolase activity
B0016805molecular_functiondipeptidase activity
B0046677biological_processresponse to antibiotic
B0046872molecular_functionmetal ion binding
B0071555biological_processcell wall organization
B0160237molecular_functionD-Ala-D-Ala dipeptidase activity
C0006508biological_processproteolysis
C0008233molecular_functionpeptidase activity
C0008237molecular_functionmetallopeptidase activity
C0008270molecular_functionzinc ion binding
C0016787molecular_functionhydrolase activity
C0016805molecular_functiondipeptidase activity
C0046677biological_processresponse to antibiotic
C0046872molecular_functionmetal ion binding
C0071555biological_processcell wall organization
C0160237molecular_functionD-Ala-D-Ala dipeptidase activity
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsActive site: {"description":"Proton donor/acceptor","evidences":[{"source":"PubMed","id":"9702193","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues6
DetailsBinding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_01924","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"9702193","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsSite: {"description":"Transition state stabilizer","evidences":[{"evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

Catalytic Information from CSA
site_idMCSA1
Number of Residues5
DetailsM-CSA 706
ChainResidueDetails

site_idMCSA2
Number of Residues5
DetailsM-CSA 706
ChainResidueDetails
BARG71electrostatic stabiliser
BHIS116metal ligand
BASP123metal ligand
BGLU181proton acceptor, proton donor
BHIS184metal ligand

246905

PDB entries from 2025-12-31

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