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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

8XKV

Cryo-EM structure of the Ycf2-FtsHi motor complex from Arabidopsis in Apo state

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0004176molecular_functionATP-dependent peptidase activity
A0004222molecular_functionmetalloendopeptidase activity
A0005515molecular_functionprotein binding
A0005524molecular_functionATP binding
A0006508biological_processproteolysis
A0008233molecular_functionpeptidase activity
A0009507cellular_componentchloroplast
A0009535cellular_componentchloroplast thylakoid membrane
A0009536cellular_componentplastid
A0009579cellular_componentthylakoid
A0009706cellular_componentchloroplast inner membrane
A0009793biological_processembryo development ending in seed dormancy
A0009941cellular_componentchloroplast envelope
A0016020cellular_componentmembrane
A0016464molecular_functionchloroplast protein-transporting ATPase activity
A0016787molecular_functionhydrolase activity
A0016887molecular_functionATP hydrolysis activity
A0045037biological_processprotein import into chloroplast stroma
A0062091cellular_componentYcf2/FtsHi complex
B0000166molecular_functionnucleotide binding
B0004176molecular_functionATP-dependent peptidase activity
B0004222molecular_functionmetalloendopeptidase activity
B0005515molecular_functionprotein binding
B0005524molecular_functionATP binding
B0005737cellular_componentcytoplasm
B0005739cellular_componentmitochondrion
B0005745cellular_componentm-AAA complex
B0006508biological_processproteolysis
B0008233molecular_functionpeptidase activity
B0008237molecular_functionmetallopeptidase activity
B0009507cellular_componentchloroplast
B0009535cellular_componentchloroplast thylakoid membrane
B0009536cellular_componentplastid
B0009579cellular_componentthylakoid
B0009706cellular_componentchloroplast inner membrane
B0009793biological_processembryo development ending in seed dormancy
B0009941cellular_componentchloroplast envelope
B0016020cellular_componentmembrane
B0016464molecular_functionchloroplast protein-transporting ATPase activity
B0016787molecular_functionhydrolase activity
B0016887molecular_functionATP hydrolysis activity
B0034982biological_processmitochondrial protein processing
B0045037biological_processprotein import into chloroplast stroma
B0046872molecular_functionmetal ion binding
B0062091cellular_componentYcf2/FtsHi complex
C0000166molecular_functionnucleotide binding
C0004176molecular_functionATP-dependent peptidase activity
C0004222molecular_functionmetalloendopeptidase activity
C0005515molecular_functionprotein binding
C0005524molecular_functionATP binding
C0005737cellular_componentcytoplasm
C0005829cellular_componentcytosol
C0006508biological_processproteolysis
C0008233molecular_functionpeptidase activity
C0009506cellular_componentplasmodesma
C0009507cellular_componentchloroplast
C0009535cellular_componentchloroplast thylakoid membrane
C0009536cellular_componentplastid
C0009658biological_processchloroplast organization
C0009706cellular_componentchloroplast inner membrane
C0009941cellular_componentchloroplast envelope
C0016020cellular_componentmembrane
C0016464molecular_functionchloroplast protein-transporting ATPase activity
C0016787molecular_functionhydrolase activity
C0016887molecular_functionATP hydrolysis activity
C0031969cellular_componentchloroplast membrane
C0045037biological_processprotein import into chloroplast stroma
C0045454biological_processcell redox homeostasis
C0062091cellular_componentYcf2/FtsHi complex
C0080093biological_processregulation of photorespiration
D0000166molecular_functionnucleotide binding
D0005515molecular_functionprotein binding
D0005524molecular_functionATP binding
D0009507cellular_componentchloroplast
D0009536cellular_componentplastid
D0009570cellular_componentchloroplast stroma
D0009941cellular_componentchloroplast envelope
D0016464molecular_functionchloroplast protein-transporting ATPase activity
D0016887molecular_functionATP hydrolysis activity
D0045037biological_processprotein import into chloroplast stroma
D0062091cellular_componentYcf2/FtsHi complex
E0000166molecular_functionnucleotide binding
E0004176molecular_functionATP-dependent peptidase activity
E0004222molecular_functionmetalloendopeptidase activity
E0005515molecular_functionprotein binding
E0005524molecular_functionATP binding
E0005829cellular_componentcytosol
E0006508biological_processproteolysis
E0008233molecular_functionpeptidase activity
E0009507cellular_componentchloroplast
E0009528cellular_componentplastid inner membrane
E0009536cellular_componentplastid
E0009658biological_processchloroplast organization
E0009706cellular_componentchloroplast inner membrane
E0009793biological_processembryo development ending in seed dormancy
E0009941cellular_componentchloroplast envelope
E0010020biological_processchloroplast fission
E0016020cellular_componentmembrane
E0016464molecular_functionchloroplast protein-transporting ATPase activity
E0016787molecular_functionhydrolase activity
E0016887molecular_functionATP hydrolysis activity
E0043572biological_processplastid fission
E0045037biological_processprotein import into chloroplast stroma
E0062091cellular_componentYcf2/FtsHi complex
F0000166molecular_functionnucleotide binding
F0004176molecular_functionATP-dependent peptidase activity
F0004222molecular_functionmetalloendopeptidase activity
F0005515molecular_functionprotein binding
F0005524molecular_functionATP binding
F0005737cellular_componentcytoplasm
F0006508biological_processproteolysis
F0008233molecular_functionpeptidase activity
F0009507cellular_componentchloroplast
F0009536cellular_componentplastid
F0009941cellular_componentchloroplast envelope
F0016020cellular_componentmembrane
F0016464molecular_functionchloroplast protein-transporting ATPase activity
F0016787molecular_functionhydrolase activity
F0016887molecular_functionATP hydrolysis activity
F0031969cellular_componentchloroplast membrane
F0045037biological_processprotein import into chloroplast stroma
F0062091cellular_componentYcf2/FtsHi complex
G0003674molecular_functionmolecular_function
G0006629biological_processlipid metabolic process
G0006656biological_processphosphatidylcholine biosynthetic process
G0008654biological_processphospholipid biosynthetic process
G0012505cellular_componentendomembrane system
G0016020cellular_componentmembrane
G0016740molecular_functiontransferase activity
H0003674molecular_functionmolecular_function
H0005886cellular_componentplasma membrane
H0009409biological_processresponse to cold
H0016020cellular_componentmembrane
I0000325cellular_componentplant-type vacuole
I0003824molecular_functioncatalytic activity
I0005515molecular_functionprotein binding
I0005737cellular_componentcytoplasm
I0005739cellular_componentmitochondrion
I0005829cellular_componentcytosol
I0006099biological_processtricarboxylic acid cycle
I0006108biological_processmalate metabolic process
I0009409biological_processresponse to cold
I0009507cellular_componentchloroplast
I0009532cellular_componentplastid stroma
I0009536cellular_componentplastid
I0009570cellular_componentchloroplast stroma
I0009658biological_processchloroplast organization
I0009706cellular_componentchloroplast inner membrane
I0009793biological_processembryo development ending in seed dormancy
I0009941cellular_componentchloroplast envelope
I0010319cellular_componentstromule
I0016464molecular_functionchloroplast protein-transporting ATPase activity
I0016491molecular_functionoxidoreductase activity
I0016615molecular_functionmalate dehydrogenase activity
I0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
I0030060molecular_functionL-malate dehydrogenase (NAD+) activity
I0042742biological_processdefense response to bacterium
I0045037biological_processprotein import into chloroplast stroma
I0048046cellular_componentapoplast
I0062091cellular_componentYcf2/FtsHi complex
J0000325cellular_componentplant-type vacuole
J0003824molecular_functioncatalytic activity
J0005515molecular_functionprotein binding
J0005737cellular_componentcytoplasm
J0005739cellular_componentmitochondrion
J0005829cellular_componentcytosol
J0006099biological_processtricarboxylic acid cycle
J0006108biological_processmalate metabolic process
J0009409biological_processresponse to cold
J0009507cellular_componentchloroplast
J0009532cellular_componentplastid stroma
J0009536cellular_componentplastid
J0009570cellular_componentchloroplast stroma
J0009658biological_processchloroplast organization
J0009706cellular_componentchloroplast inner membrane
J0009793biological_processembryo development ending in seed dormancy
J0009941cellular_componentchloroplast envelope
J0010319cellular_componentstromule
J0016464molecular_functionchloroplast protein-transporting ATPase activity
J0016491molecular_functionoxidoreductase activity
J0016615molecular_functionmalate dehydrogenase activity
J0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
J0030060molecular_functionL-malate dehydrogenase (NAD+) activity
J0042742biological_processdefense response to bacterium
J0045037biological_processprotein import into chloroplast stroma
J0048046cellular_componentapoplast
J0062091cellular_componentYcf2/FtsHi complex
K0003674molecular_functionmolecular_function
R0003674molecular_functionmolecular_function
R0009507cellular_componentchloroplast
R0009941cellular_componentchloroplast envelope
R0010027biological_processthylakoid membrane organization
R1901371biological_processregulation of leaf morphogenesis
Functional Information from PROSITE/UniProt
site_idPS00068
Number of Residues13
DetailsMDH Malate dehydrogenase active site signature. VTTLDvvRAntfV
ChainResidueDetails
IVAL227-VAL239
site_idPS00674
Number of Residues19
DetailsAAA AAA-protein family signature. VlVIgATNrldiLDpALl.R
ChainResidueDetails
AVAL457-ARG475
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues80
DetailsTransmembrane: {"description":"Helical","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI2
Number of Residues35
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI3
Number of Residues1
DetailsActive site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails
site_idSWS_FT_FI4
Number of Residues3
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails
site_idSWS_FT_FI5
Number of Residues7
DetailsBinding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_01330","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI7
Number of Residues2
DetailsActive site: {"description":"Proton acceptor","evidences":[{"source":"UniProtKB","id":"P11708","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails
site_idSWS_FT_FI8
Number of Residues22
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"P40926","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails
site_idSWS_FT_FI9
Number of Residues8
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"P11708","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

238895

PDB entries from 2025-07-16

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