8VTU
Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-66, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolution
This is a non-PDB format compatible entry.
Functional Information from PROSITE/UniProt
site_id | PS00049 |
Number of Residues | 27 |
Details | RIBOSOMAL_L14 Ribosomal protein L14 signature. AVVVrtkkeikrp.DGsairFddNaaVI |
Chain | Residue | Details |
1O | ALA60-ILE86 |
site_id | PS00052 |
Number of Residues | 27 |
Details | RIBOSOMAL_S7 Ribosomal protein S7 signature. DvLvtaFInkimrdGKKnlaarIFydA |
Chain | Residue | Details |
1g | ASP20-ALA46 |
site_id | PS00053 |
Number of Residues | 18 |
Details | RIBOSOMAL_S8 Ribosomal protein S8 signature. GiaILSTSkGVLtdreAR |
Chain | Residue | Details |
1h | GLY108-ARG125 |
site_id | PS00054 |
Number of Residues | 23 |
Details | RIBOSOMAL_S11 Ribosomal protein S11 signature. IrALqaS.GLqVksivDdTPvPHN |
Chain | Residue | Details |
1k | ILE95-ASN117 |
site_id | PS00055 |
Number of Residues | 8 |
Details | RIBOSOMAL_S12 Ribosomal protein S12 signature. KkPNSAlR |
Chain | Residue | Details |
1l | LYS46-ARG53 |
site_id | PS00056 |
Number of Residues | 13 |
Details | RIBOSOMAL_S17 Ribosomal protein S17 signature. GDvVeIiEsRPIS |
Chain | Residue | Details |
1q | GLY54-SER66 |
site_id | PS00057 |
Number of Residues | 24 |
Details | RIBOSOMAL_S18 Ribosomal protein S18 signature. RDYrn.VevLkrFLSEt.GKIlprRR |
Chain | Residue | Details |
2r | ARG32-ARG55 |
site_id | PS00063 |
Number of Residues | 16 |
Details | ALDOKETO_REDUCTASE_3 Aldo/keto reductase family putative active site signature. LAKTIKraRIlGLlPF |
Chain | Residue | Details |
2r | LEU66-PHE81 |
site_id | PS00196 |
Number of Residues | 16 |
Details | COPPER_BLUE Type-1 copper (blue) proteins signature. GrvY.VICenPkHkqr.Q |
Chain | Residue | Details |
19 | GLY21-GLN36 |
site_id | PS00323 |
Number of Residues | 25 |
Details | RIBOSOMAL_S19 Ribosomal protein S19 signature. NGKqhvpvyItenmVGhkLGEFapT |
Chain | Residue | Details |
2s | ASN53-THR77 |
site_id | PS00358 |
Number of Residues | 17 |
Details | RIBOSOMAL_L5 Ribosomal protein L5 signature. LalITGQkpAvTrAKkS |
Chain | Residue | Details |
1G | LEU60-SER76 |
site_id | PS00360 |
Number of Residues | 19 |
Details | RIBOSOMAL_S9 Ribosomal protein S9 signature. GGGksGQidAiklGiARAL |
Chain | Residue | Details |
1i | GLY67-LEU85 |
site_id | PS00361 |
Number of Residues | 16 |
Details | RIBOSOMAL_S10 Ribosomal protein S10 signature. ArrsGAqvsGPIpLPT |
Chain | Residue | Details |
1j | ALA27-THR42 |
site_id | PS00362 |
Number of Residues | 31 |
Details | RIBOSOMAL_S15 Ribosomal protein S15 signature. LseHLkvhKkDhhShrgLlmMvgqrrrLlrY |
Chain | Residue | Details |
1o | LEU39-TYR69 |
site_id | PS00464 |
Number of Residues | 25 |
Details | RIBOSOMAL_L22 Ribosomal protein L22 signature. KrvLpRArGRadiikkrtSHITViL |
Chain | Residue | Details |
1W | LYS83-LEU107 |
site_id | PS00467 |
Number of Residues | 12 |
Details | RIBOSOMAL_L2 Ribosomal protein L2 signature. PhvRGAAmNPvD |
Chain | Residue | Details |
1D | PRO219-ASP230 |
site_id | PS00474 |
Number of Residues | 24 |
Details | RIBOSOMAL_L3 Ribosomal protein L3 signature. FkpgervDvtGtSkGRGfaGvmkR |
Chain | Residue | Details |
1E | PHE96-ARG119 |
site_id | PS00475 |
Number of Residues | 30 |
Details | RIBOSOMAL_L15 Ribosomal protein L15 signature. KILGeGeAkp...LkVvahaFSksAlekLkaaG |
Chain | Residue | Details |
1P | LYS113-GLY142 |
site_id | PS00527 |
Number of Residues | 23 |
Details | RIBOSOMAL_S14 Ribosomal protein S14 signature. R.CvrcgrarsvyrfFGLCRiCLR |
Chain | Residue | Details |
1n | ARG23-ARG45 |
site_id | PS00548 |
Number of Residues | 35 |
Details | RIBOSOMAL_S3 Ribosomal protein S3 signature. ARtewaaqGrVplHt..LranIDygfalarTtyGvlG |
Chain | Residue | Details |
1c | ALA163-GLY197 |
site_id | PS00579 |
Number of Residues | 15 |
Details | RIBOSOMAL_L29 Ribosomal protein L29 signature. QNHKIRdLKRQIARL |
Chain | Residue | Details |
22 | GLN46-LEU60 |
site_id | PS00582 |
Number of Residues | 20 |
Details | RIBOSOMAL_L33 Ribosomal protein L33 signature. YaTeKNkrntPnkLElrKYC |
Chain | Residue | Details |
16 | TYR21-CYS40 |
site_id | PS00585 |
Number of Residues | 33 |
Details | RIBOSOMAL_S5 Ribosomal protein S5 signature. GRrfrFgAlvVVGDrq.GrVGlGfgkap.EVpl.AV |
Chain | Residue | Details |
1e | GLY23-VAL55 |
site_id | PS00632 |
Number of Residues | 25 |
Details | RIBOSOMAL_S4 Ribosomal protein S4 signature. LEsRLdnvVYRlgfAvSrrqARqLV |
Chain | Residue | Details |
1d | LEU97-VAL121 |
site_id | PS00634 |
Number of Residues | 33 |
Details | RIBOSOMAL_L30 Ribosomal protein L30 signature. ALkaLgLrRlqQeRvledtpairgNVekVahLV |
Chain | Residue | Details |
23 | ALA22-VAL54 |
site_id | PS00646 |
Number of Residues | 14 |
Details | RIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGlRHrrGlpVRGQ |
Chain | Residue | Details |
1m | ARG88-GLN101 |
site_id | PS00651 |
Number of Residues | 28 |
Details | RIBOSOMAL_L9 Ribosomal protein L9 signature. GdvGqvvdVkpGYarNYLlprglAvlaT |
Chain | Residue | Details |
1I | GLY13-THR40 |
site_id | PS00783 |
Number of Residues | 23 |
Details | RIBOSOMAL_L13 Ribosomal protein L13 signature. VKGMLPkgpl.GRrlfkrLkVYaG |
Chain | Residue | Details |
1N | VAL103-GLY125 |
site_id | PS00784 |
Number of Residues | 20 |
Details | RIBOSOMAL_L34 Ribosomal protein L34 signature. KRTWQpnrrkRakth.GFraR |
Chain | Residue | Details |
17 | LYS2-ARG21 |
site_id | PS00828 |
Number of Residues | 26 |
Details | RIBOSOMAL_L36 Ribosomal protein L36 signature. CdkCkvIrRhgrVyViCenp.KHkQrQ |
Chain | Residue | Details |
19 | CYS11-GLN36 |
site_id | PS00831 |
Number of Residues | 15 |
Details | RIBOSOMAL_L27 Ribosomal protein L27 signature. GnILvRQRGtrfkpG |
Chain | Residue | Details |
10 | GLY34-GLY48 |
site_id | PS00936 |
Number of Residues | 27 |
Details | RIBOSOMAL_L35 Ribosomal protein L35 signature. KTHkGAkKRVkitasgkvvamktgk.RH |
Chain | Residue | Details |
18 | LYS5-HIS31 |
site_id | PS00937 |
Number of Residues | 17 |
Details | RIBOSOMAL_L20 Ribosomal protein L20 signature. KrdfRrLWIVRINaacR |
Chain | Residue | Details |
1U | LYS54-ARG70 |
site_id | PS00962 |
Number of Residues | 12 |
Details | RIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. VkELLEAGVHFG |
Chain | Residue | Details |
1b | VAL7-GLY18 |
site_id | PS01015 |
Number of Residues | 16 |
Details | RIBOSOMAL_L19 Ribosomal protein L19 signature. IvQrGRAR.RAKLYFIR |
Chain | Residue | Details |
1T | ILE88-ARG103 |
site_id | PS01048 |
Number of Residues | 10 |
Details | RIBOSOMAL_S6 Ribosomal protein S6 signature. GlRRLAYpIA |
Chain | Residue | Details |
1f | GLY44-ALA53 |
site_id | PS01108 |
Number of Residues | 18 |
Details | RIBOSOMAL_L24 Ribosomal protein L24 signature. GDtVlVAsGkyKGrv.GkV |
Chain | Residue | Details |
1Y | GLY10-VAL27 |
site_id | PS01143 |
Number of Residues | 22 |
Details | RIBOSOMAL_L31 Ribosomal protein L31 signature. EVcskcHPFYTgqqrfvdte....GR |
Chain | Residue | Details |
24 | GLU34-ARG55 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 8 |
Details | BINDING: BINDING => ECO:0000269|PubMed:11866529 |
Chain | Residue | Details |
1n | CYS24 | |
1n | CYS27 | |
1n | CYS40 | |
1n | CYS43 | |
2n | CYS24 | |
2n | CYS27 | |
2n | CYS40 | |
2n | CYS43 |