8VQ2
HSV1 polymerase ternary complex with dsDNA and compound 44
This is a non-PDB format compatible entry.
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000166 | molecular_function | nucleotide binding |
| A | 0003676 | molecular_function | nucleic acid binding |
| A | 0003677 | molecular_function | DNA binding |
| A | 0003824 | molecular_function | catalytic activity |
| A | 0003887 | molecular_function | DNA-directed DNA polymerase activity |
| A | 0004518 | molecular_function | nuclease activity |
| A | 0004519 | molecular_function | endonuclease activity |
| A | 0004523 | molecular_function | RNA-DNA hybrid ribonuclease activity |
| A | 0004527 | molecular_function | exonuclease activity |
| A | 0006260 | biological_process | DNA replication |
| A | 0006261 | biological_process | DNA-templated DNA replication |
| A | 0006287 | biological_process | base-excision repair, gap-filling |
| A | 0006297 | biological_process | nucleotide-excision repair, DNA gap filling |
| A | 0008296 | molecular_function | 3'-5'-DNA exonuclease activity |
| A | 0016740 | molecular_function | transferase activity |
| A | 0016779 | molecular_function | nucleotidyltransferase activity |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0034061 | molecular_function | DNA polymerase activity |
| A | 0039686 | biological_process | bidirectional double-stranded viral DNA replication |
| A | 0039693 | biological_process | viral DNA genome replication |
| A | 0042025 | cellular_component | host cell nucleus |
| A | 0045004 | biological_process | DNA replication proofreading |
| B | 0000166 | molecular_function | nucleotide binding |
| B | 0003676 | molecular_function | nucleic acid binding |
| B | 0003677 | molecular_function | DNA binding |
| B | 0003824 | molecular_function | catalytic activity |
| B | 0003887 | molecular_function | DNA-directed DNA polymerase activity |
| B | 0004518 | molecular_function | nuclease activity |
| B | 0004519 | molecular_function | endonuclease activity |
| B | 0004523 | molecular_function | RNA-DNA hybrid ribonuclease activity |
| B | 0004527 | molecular_function | exonuclease activity |
| B | 0006260 | biological_process | DNA replication |
| B | 0006261 | biological_process | DNA-templated DNA replication |
| B | 0006287 | biological_process | base-excision repair, gap-filling |
| B | 0006297 | biological_process | nucleotide-excision repair, DNA gap filling |
| B | 0008296 | molecular_function | 3'-5'-DNA exonuclease activity |
| B | 0016740 | molecular_function | transferase activity |
| B | 0016779 | molecular_function | nucleotidyltransferase activity |
| B | 0016787 | molecular_function | hydrolase activity |
| B | 0034061 | molecular_function | DNA polymerase activity |
| B | 0039686 | biological_process | bidirectional double-stranded viral DNA replication |
| B | 0039693 | biological_process | viral DNA genome replication |
| B | 0042025 | cellular_component | host cell nucleus |
| B | 0045004 | biological_process | DNA replication proofreading |
Functional Information from PROSITE/UniProt
| site_id | PS00116 |
| Number of Residues | 9 |
| Details | DNA_POLYMERASE_B DNA polymerase family B signature. YGDTDSIFV |
| Chain | Residue | Details |
| A | TYR884-VAL892 |
