Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

8URI

Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 27 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome

This is a non-PDB format compatible entry.

Functional Information from GO Data

Chain	GOid	namespace	contents
0	0003723	molecular_function	RNA binding
0	0003735	molecular_function	structural constituent of ribosome
0	0005840	cellular_component	ribosome
0	0006412	biological_process	translation
1	0002181	biological_process	cytoplasmic translation
1	0003735	molecular_function	structural constituent of ribosome
1	0005515	molecular_function	protein binding
1	0005737	cellular_component	cytoplasm
1	0005829	cellular_component	cytosol
1	0005840	cellular_component	ribosome
1	0006412	biological_process	translation
1	0015934	cellular_component	large ribosomal subunit
1	0019843	molecular_function	rRNA binding
1	0022625	cellular_component	cytosolic large ribosomal subunit
1	0042255	biological_process	ribosome assembly
1	0042256	biological_process	cytosolic ribosome assembly
1	0046677	biological_process	response to antibiotic
1	0070180	molecular_function	large ribosomal subunit rRNA binding
1	1902626	biological_process	assembly of large subunit precursor of preribosome
1	1990904	cellular_component	ribonucleoprotein complex
2	0003735	molecular_function	structural constituent of ribosome
2	0005840	cellular_component	ribosome
2	0006412	biological_process	translation
2	0019843	molecular_function	rRNA binding
3	0003723	molecular_function	RNA binding
3	0003735	molecular_function	structural constituent of ribosome
3	0005840	cellular_component	ribosome
3	0006412	biological_process	translation
4	0003735	molecular_function	structural constituent of ribosome
4	0005840	cellular_component	ribosome
4	0006412	biological_process	translation
4	0008097	molecular_function	5S rRNA binding
9	0002181	biological_process	cytoplasmic translation
9	0003735	molecular_function	structural constituent of ribosome
9	0003924	molecular_function	GTPase activity
9	0005515	molecular_function	protein binding
9	0005737	cellular_component	cytoplasm
9	0005829	cellular_component	cytosol
9	0005840	cellular_component	ribosome
9	0006412	biological_process	translation
9	0006417	biological_process	regulation of translation
9	0015934	cellular_component	large ribosomal subunit
9	0017148	biological_process	negative regulation of translation
9	0019843	molecular_function	rRNA binding
9	0022625	cellular_component	cytosolic large ribosomal subunit
9	0043022	molecular_function	ribosome binding
9	0070180	molecular_function	large ribosomal subunit rRNA binding
9	1990904	cellular_component	ribonucleoprotein complex
AA	0000345	cellular_component	cytosolic DNA-directed RNA polymerase complex
AA	0000428	cellular_component	DNA-directed RNA polymerase complex
AA	0001054	molecular_function	RNA polymerase I activity
AA	0001055	molecular_function	RNA polymerase II activity
AA	0001056	molecular_function	RNA polymerase III activity
AA	0001057	molecular_function	RNA polymerase IV activity
AA	0001058	molecular_function	RNA polymerase V activity
AA	0001059	biological_process	transcription by RNA polymerase IV
AA	0001060	biological_process	transcription by RNA polymerase V
AA	0001066	molecular_function	plastid single subunit type RNA polymerase activity
AA	0003677	molecular_function	DNA binding
AA	0003899	molecular_function	DNA-directed 5'-3' RNA polymerase activity
AA	0005515	molecular_function	protein binding
AA	0005737	cellular_component	cytoplasm
AA	0005829	cellular_component	cytosol
AA	0006351	biological_process	DNA-templated transcription
AA	0006352	biological_process	DNA-templated transcription initiation
AA	0006360	biological_process	transcription by RNA polymerase I
AA	0006366	biological_process	transcription by RNA polymerase II
AA	0006383	biological_process	transcription by RNA polymerase III
AA	0006879	biological_process	intracellular iron ion homeostasis
AA	0008023	cellular_component	transcription elongation factor complex
AA	0009408	biological_process	response to heat
AA	0016020	cellular_component	membrane
AA	0016779	molecular_function	nucleotidyltransferase activity
AA	0031564	biological_process	transcription antitermination
AA	0032549	molecular_function	ribonucleoside binding
AA	0032784	biological_process	regulation of DNA-templated transcription elongation
AA	0034062	molecular_function	5'-3' RNA polymerase activity
AA	0036460	biological_process	cellular response to cell envelope stress
AA	0042128	biological_process	nitrate assimilation
AA	0042793	biological_process	plastid transcription
AA	0044780	biological_process	bacterial-type flagellum assembly
AA	0046677	biological_process	response to antibiotic
AA	0048870	biological_process	cell motility
AA	0071973	biological_process	bacterial-type flagellum-dependent cell motility
AA	0090605	biological_process	submerged biofilm formation
AA	2000142	biological_process	regulation of DNA-templated transcription initiation
AB	0001073	molecular_function	transcription antitermination factor activity, DNA binding
AB	0003677	molecular_function	DNA binding
AB	0005829	cellular_component	cytosol
AB	0006354	biological_process	DNA-templated transcription elongation
AB	0006355	biological_process	regulation of DNA-templated transcription
AB	0031564	biological_process	transcription antitermination
AB	0140673	biological_process	transcription elongation-coupled chromatin remodeling
AC	0000345	cellular_component	cytosolic DNA-directed RNA polymerase complex
AC	0000428	cellular_component	DNA-directed RNA polymerase complex
AC	0001054	molecular_function	RNA polymerase I activity
AC	0001055	molecular_function	RNA polymerase II activity
AC	0001056	molecular_function	RNA polymerase III activity
AC	0001057	molecular_function	RNA polymerase IV activity
AC	0001058	molecular_function	RNA polymerase V activity
AC	0001059	biological_process	transcription by RNA polymerase IV
AC	0001060	biological_process	transcription by RNA polymerase V
AC	0001066	molecular_function	plastid single subunit type RNA polymerase activity
AC	0003677	molecular_function	DNA binding
AC	0003899	molecular_function	DNA-directed 5'-3' RNA polymerase activity
AC	0005515	molecular_function	protein binding
AC	0005737	cellular_component	cytoplasm
AC	0005829	cellular_component	cytosol
AC	0006351	biological_process	DNA-templated transcription
AC	0006352	biological_process	DNA-templated transcription initiation
AC	0006360	biological_process	transcription by RNA polymerase I
AC	0006366	biological_process	transcription by RNA polymerase II
AC	0006383	biological_process	transcription by RNA polymerase III
AC	0006879	biological_process	intracellular iron ion homeostasis
AC	0008023	cellular_component	transcription elongation factor complex
AC	0009408	biological_process	response to heat
AC	0016020	cellular_component	membrane
AC	0016779	molecular_function	nucleotidyltransferase activity
AC	0031564	biological_process	transcription antitermination
AC	0032784	biological_process	regulation of DNA-templated transcription elongation
AC	0034062	molecular_function	5'-3' RNA polymerase activity
AC	0036460	biological_process	cellular response to cell envelope stress
AC	0042128	biological_process	nitrate assimilation
AC	0042793	biological_process	plastid transcription
AC	0044780	biological_process	bacterial-type flagellum assembly
AC	0046983	molecular_function	protein dimerization activity
AC	0048870	biological_process	cell motility
AC	0071973	biological_process	bacterial-type flagellum-dependent cell motility
AC	0090605	biological_process	submerged biofilm formation
AC	2000142	biological_process	regulation of DNA-templated transcription initiation
AD	0000345	cellular_component	cytosolic DNA-directed RNA polymerase complex
AD	0000428	cellular_component	DNA-directed RNA polymerase complex
AD	0001054	molecular_function	RNA polymerase I activity
AD	0001055	molecular_function	RNA polymerase II activity
AD	0001056	molecular_function	RNA polymerase III activity
AD	0001057	molecular_function	RNA polymerase IV activity
AD	0001058	molecular_function	RNA polymerase V activity
AD	0001059	biological_process	transcription by RNA polymerase IV
AD	0001060	biological_process	transcription by RNA polymerase V
AD	0001066	molecular_function	plastid single subunit type RNA polymerase activity
AD	0003677	molecular_function	DNA binding
AD	0003899	molecular_function	DNA-directed 5'-3' RNA polymerase activity
AD	0005515	molecular_function	protein binding
AD	0005737	cellular_component	cytoplasm
AD	0005829	cellular_component	cytosol
AD	0006351	biological_process	DNA-templated transcription
AD	0006352	biological_process	DNA-templated transcription initiation
AD	0006360	biological_process	transcription by RNA polymerase I
AD	0006366	biological_process	transcription by RNA polymerase II
AD	0006383	biological_process	transcription by RNA polymerase III
AD	0006879	biological_process	intracellular iron ion homeostasis
AD	0008023	cellular_component	transcription elongation factor complex
AD	0009408	biological_process	response to heat
AD	0016020	cellular_component	membrane
AD	0016779	molecular_function	nucleotidyltransferase activity
AD	0031564	biological_process	transcription antitermination
AD	0032784	biological_process	regulation of DNA-templated transcription elongation
AD	0034062	molecular_function	5'-3' RNA polymerase activity
AD	0036460	biological_process	cellular response to cell envelope stress
AD	0042128	biological_process	nitrate assimilation
AD	0042793	biological_process	plastid transcription
AD	0044780	biological_process	bacterial-type flagellum assembly
AD	0046983	molecular_function	protein dimerization activity
AD	0048870	biological_process	cell motility
AD	0071973	biological_process	bacterial-type flagellum-dependent cell motility
AD	0090605	biological_process	submerged biofilm formation
AD	2000142	biological_process	regulation of DNA-templated transcription initiation
AE	0000287	molecular_function	magnesium ion binding
AE	0000345	cellular_component	cytosolic DNA-directed RNA polymerase complex
AE	0000428	cellular_component	DNA-directed RNA polymerase complex
AE	0001054	molecular_function	RNA polymerase I activity
AE	0001055	molecular_function	RNA polymerase II activity
AE	0001056	molecular_function	RNA polymerase III activity
AE	0001057	molecular_function	RNA polymerase IV activity
AE	0001058	molecular_function	RNA polymerase V activity
AE	0001059	biological_process	transcription by RNA polymerase IV
AE	0001060	biological_process	transcription by RNA polymerase V
AE	0001066	molecular_function	plastid single subunit type RNA polymerase activity
AE	0003677	molecular_function	DNA binding
AE	0003899	molecular_function	DNA-directed 5'-3' RNA polymerase activity
AE	0005515	molecular_function	protein binding
AE	0005737	cellular_component	cytoplasm
AE	0005829	cellular_component	cytosol
AE	0006351	biological_process	DNA-templated transcription
AE	0006352	biological_process	DNA-templated transcription initiation
AE	0006360	biological_process	transcription by RNA polymerase I
AE	0006366	biological_process	transcription by RNA polymerase II
AE	0006383	biological_process	transcription by RNA polymerase III
AE	0006879	biological_process	intracellular iron ion homeostasis
AE	0008023	cellular_component	transcription elongation factor complex
AE	0008270	molecular_function	zinc ion binding
AE	0009408	biological_process	response to heat
AE	0016020	cellular_component	membrane
AE	0016779	molecular_function	nucleotidyltransferase activity
AE	0031564	biological_process	transcription antitermination
AE	0032784	biological_process	regulation of DNA-templated transcription elongation
AE	0034062	molecular_function	5'-3' RNA polymerase activity
AE	0036460	biological_process	cellular response to cell envelope stress
AE	0042128	biological_process	nitrate assimilation
AE	0042793	biological_process	plastid transcription
AE	0044780	biological_process	bacterial-type flagellum assembly
AE	0046677	biological_process	response to antibiotic
AE	0046872	molecular_function	metal ion binding
AE	0048870	biological_process	cell motility
AE	0071973	biological_process	bacterial-type flagellum-dependent cell motility
AE	0090605	biological_process	submerged biofilm formation
AE	2000142	biological_process	regulation of DNA-templated transcription initiation
AF	0000345	cellular_component	cytosolic DNA-directed RNA polymerase complex
AF	0000428	cellular_component	DNA-directed RNA polymerase complex
AF	0001000	molecular_function	bacterial-type RNA polymerase core enzyme binding
AF	0001054	molecular_function	RNA polymerase I activity
AF	0001055	molecular_function	RNA polymerase II activity
AF	0001056	molecular_function	RNA polymerase III activity
AF	0001057	molecular_function	RNA polymerase IV activity
AF	0001058	molecular_function	RNA polymerase V activity
AF	0001059	biological_process	transcription by RNA polymerase IV
AF	0001060	biological_process	transcription by RNA polymerase V
AF	0001066	molecular_function	plastid single subunit type RNA polymerase activity
AF	0003677	molecular_function	DNA binding
AF	0003899	molecular_function	DNA-directed 5'-3' RNA polymerase activity
AF	0005829	cellular_component	cytosol
AF	0006351	biological_process	DNA-templated transcription
AF	0006352	biological_process	DNA-templated transcription initiation
AF	0006360	biological_process	transcription by RNA polymerase I
AF	0006366	biological_process	transcription by RNA polymerase II
AF	0006383	biological_process	transcription by RNA polymerase III
AF	0006879	biological_process	intracellular iron ion homeostasis
AF	0008023	cellular_component	transcription elongation factor complex
AF	0009408	biological_process	response to heat
AF	0016779	molecular_function	nucleotidyltransferase activity
AF	0030880	cellular_component	RNA polymerase complex
AF	0031564	biological_process	transcription antitermination
AF	0032784	biological_process	regulation of DNA-templated transcription elongation
AF	0034062	molecular_function	5'-3' RNA polymerase activity
AF	0036460	biological_process	cellular response to cell envelope stress
AF	0042128	biological_process	nitrate assimilation
AF	0042793	biological_process	plastid transcription
AF	0044780	biological_process	bacterial-type flagellum assembly
AF	0048870	biological_process	cell motility
AF	0065003	biological_process	protein-containing complex assembly
AF	0071973	biological_process	bacterial-type flagellum-dependent cell motility
AF	0090605	biological_process	submerged biofilm formation
AF	2000142	biological_process	regulation of DNA-templated transcription initiation
AG	0000166	molecular_function	nucleotide binding
AG	0003676	molecular_function	nucleic acid binding
AG	0003700	molecular_function	DNA-binding transcription factor activity
AG	0003723	molecular_function	RNA binding
AG	0006353	biological_process	DNA-templated transcription termination
AG	0031554	biological_process	regulation of termination of DNA-templated transcription
AG	0031564	biological_process	transcription antitermination
C	0003735	molecular_function	structural constituent of ribosome
C	0005840	cellular_component	ribosome
C	0006412	biological_process	translation
C	0019843	molecular_function	rRNA binding
C	0022627	cellular_component	cytosolic small ribosomal subunit
C	0070181	molecular_function	small ribosomal subunit rRNA binding
C	1990904	cellular_component	ribonucleoprotein complex
E	0000028	biological_process	ribosomal small subunit assembly
E	0003723	molecular_function	RNA binding
E	0003735	molecular_function	structural constituent of ribosome
E	0005829	cellular_component	cytosol
E	0005840	cellular_component	ribosome
E	0006412	biological_process	translation
E	0015935	cellular_component	small ribosomal subunit
E	0019843	molecular_function	rRNA binding
E	0022627	cellular_component	cytosolic small ribosomal subunit
E	0070181	molecular_function	small ribosomal subunit rRNA binding
E	1990904	cellular_component	ribonucleoprotein complex
F	0003735	molecular_function	structural constituent of ribosome
F	0005840	cellular_component	ribosome
F	0006412	biological_process	translation
F	1990904	cellular_component	ribonucleoprotein complex
G	0003735	molecular_function	structural constituent of ribosome
G	0005840	cellular_component	ribosome
G	0006412	biological_process	translation
G	0015935	cellular_component	small ribosomal subunit
G	0022627	cellular_component	cytosolic small ribosomal subunit
G	1990904	cellular_component	ribonucleoprotein complex
H	0003676	molecular_function	nucleic acid binding
H	0003723	molecular_function	RNA binding
H	0003735	molecular_function	structural constituent of ribosome
H	0005840	cellular_component	ribosome
H	0006412	biological_process	translation
I	0003676	molecular_function	nucleic acid binding
I	0003723	molecular_function	RNA binding
I	0003729	molecular_function	mRNA binding
I	0003735	molecular_function	structural constituent of ribosome
I	0005840	cellular_component	ribosome
I	0006412	biological_process	translation
I	0019843	molecular_function	rRNA binding
I	0022627	cellular_component	cytosolic small ribosomal subunit
I	1990904	cellular_component	ribonucleoprotein complex
J	0000028	biological_process	ribosomal small subunit assembly
J	0000900	molecular_function	mRNA regulatory element binding translation repressor activity
J	0002181	biological_process	cytoplasmic translation
J	0003723	molecular_function	RNA binding
J	0003735	molecular_function	structural constituent of ribosome
J	0005515	molecular_function	protein binding
J	0005737	cellular_component	cytoplasm
J	0005829	cellular_component	cytosol
J	0005840	cellular_component	ribosome
J	0006353	biological_process	DNA-templated transcription termination
J	0006412	biological_process	translation
J	0006417	biological_process	regulation of translation
J	0015935	cellular_component	small ribosomal subunit
J	0019843	molecular_function	rRNA binding
J	0022627	cellular_component	cytosolic small ribosomal subunit
J	0031564	biological_process	transcription antitermination
J	0042254	biological_process	ribosome biogenesis
J	0042274	biological_process	ribosomal small subunit biogenesis
J	0045947	biological_process	negative regulation of translational initiation
J	0046677	biological_process	response to antibiotic
J	0048027	molecular_function	mRNA 5'-UTR binding
J	1990145	biological_process	maintenance of translational fidelity
J	1990904	cellular_component	ribonucleoprotein complex
K	0000028	biological_process	ribosomal small subunit assembly
K	0002181	biological_process	cytoplasmic translation
K	0003723	molecular_function	RNA binding
K	0003735	molecular_function	structural constituent of ribosome
K	0005515	molecular_function	protein binding
K	0005737	cellular_component	cytoplasm
K	0005829	cellular_component	cytosol
K	0005840	cellular_component	ribosome
K	0006412	biological_process	translation
K	0015935	cellular_component	small ribosomal subunit
K	0019843	molecular_function	rRNA binding
K	0022627	cellular_component	cytosolic small ribosomal subunit
K	0046677	biological_process	response to antibiotic
K	1990145	biological_process	maintenance of translational fidelity
K	1990904	cellular_component	ribonucleoprotein complex
L	0002181	biological_process	cytoplasmic translation
L	0003735	molecular_function	structural constituent of ribosome
L	0005515	molecular_function	protein binding
L	0005737	cellular_component	cytoplasm
L	0005829	cellular_component	cytosol
L	0005840	cellular_component	ribosome
L	0006412	biological_process	translation
L	0019843	molecular_function	rRNA binding
L	0022627	cellular_component	cytosolic small ribosomal subunit
L	0048027	molecular_function	mRNA 5'-UTR binding
L	0070181	molecular_function	small ribosomal subunit rRNA binding
L	1990904	cellular_component	ribonucleoprotein complex
M	0000028	biological_process	ribosomal small subunit assembly
M	0000049	molecular_function	tRNA binding
M	0002181	biological_process	cytoplasmic translation
M	0003723	molecular_function	RNA binding
M	0003729	molecular_function	mRNA binding
M	0003735	molecular_function	structural constituent of ribosome
M	0005515	molecular_function	protein binding
M	0005737	cellular_component	cytoplasm
M	0005829	cellular_component	cytosol
M	0005840	cellular_component	ribosome
M	0006412	biological_process	translation
M	0015935	cellular_component	small ribosomal subunit
M	0016020	cellular_component	membrane
M	0017148	biological_process	negative regulation of translation
M	0019843	molecular_function	rRNA binding
M	0022627	cellular_component	cytosolic small ribosomal subunit
M	1990904	cellular_component	ribonucleoprotein complex
N	0003735	molecular_function	structural constituent of ribosome
N	0005840	cellular_component	ribosome
N	0006412	biological_process	translation
O	0003735	molecular_function	structural constituent of ribosome
O	0005840	cellular_component	ribosome
O	0006412	biological_process	translation
P	0003723	molecular_function	RNA binding
P	0003735	molecular_function	structural constituent of ribosome
P	0005840	cellular_component	ribosome
P	0006412	biological_process	translation
Q	0003735	molecular_function	structural constituent of ribosome
Q	0005840	cellular_component	ribosome
Q	0006412	biological_process	translation
Q	0019843	molecular_function	rRNA binding
Q	1990904	cellular_component	ribonucleoprotein complex
R	0000049	molecular_function	tRNA binding
R	0000372	biological_process	Group I intron splicing
R	0002181	biological_process	cytoplasmic translation
R	0003735	molecular_function	structural constituent of ribosome
R	0005515	molecular_function	protein binding
R	0005737	cellular_component	cytoplasm
R	0005829	cellular_component	cytosol
R	0005840	cellular_component	ribosome
R	0006412	biological_process	translation
R	0015935	cellular_component	small ribosomal subunit
R	0019843	molecular_function	rRNA binding
R	0022627	cellular_component	cytosolic small ribosomal subunit
R	0033120	biological_process	positive regulation of RNA splicing
R	0034336	molecular_function	misfolded RNA binding
R	0034337	biological_process	RNA folding
R	0046677	biological_process	response to antibiotic
R	1990145	biological_process	maintenance of translational fidelity
R	1990904	cellular_component	ribonucleoprotein complex
S	0003735	molecular_function	structural constituent of ribosome
S	0005840	cellular_component	ribosome
S	0006412	biological_process	translation
T	0003735	molecular_function	structural constituent of ribosome
T	0005840	cellular_component	ribosome
T	0006412	biological_process	translation
U	0000028	biological_process	ribosomal small subunit assembly
U	0003735	molecular_function	structural constituent of ribosome
U	0005737	cellular_component	cytoplasm
U	0005840	cellular_component	ribosome
U	0006412	biological_process	translation
U	0015935	cellular_component	small ribosomal subunit
U	0022627	cellular_component	cytosolic small ribosomal subunit
U	1990904	cellular_component	ribonucleoprotein complex
V	0003735	molecular_function	structural constituent of ribosome
V	0005840	cellular_component	ribosome
V	0006412	biological_process	translation
W	0003723	molecular_function	RNA binding
W	0003735	molecular_function	structural constituent of ribosome
W	0005840	cellular_component	ribosome
W	0006412	biological_process	translation
W	0015935	cellular_component	small ribosomal subunit
X	0000049	molecular_function	tRNA binding
X	0003676	molecular_function	nucleic acid binding
X	0003723	molecular_function	RNA binding
X	0003735	molecular_function	structural constituent of ribosome
X	0005829	cellular_component	cytosol
X	0005840	cellular_component	ribosome
X	0006412	biological_process	translation
X	0015935	cellular_component	small ribosomal subunit
X	0019843	molecular_function	rRNA binding
X	1990904	cellular_component	ribonucleoprotein complex
Y	0000027	biological_process	ribosomal large subunit assembly
Y	0002181	biological_process	cytoplasmic translation
Y	0003735	molecular_function	structural constituent of ribosome
Y	0005515	molecular_function	protein binding
Y	0005737	cellular_component	cytoplasm
Y	0005829	cellular_component	cytosol
Y	0005840	cellular_component	ribosome
Y	0006412	biological_process	translation
Y	0006415	biological_process	translational termination
Y	0015968	biological_process	stringent response
Y	0019843	molecular_function	rRNA binding
Y	0022625	cellular_component	cytosolic large ribosomal subunit
Y	0070180	molecular_function	large ribosomal subunit rRNA binding
Y	1990904	cellular_component	ribonucleoprotein complex
Z	0003735	molecular_function	structural constituent of ribosome
Z	0005840	cellular_component	ribosome
Z	0006412	biological_process	translation
b	0000027	biological_process	ribosomal large subunit assembly
b	0000049	molecular_function	tRNA binding
b	0001558	biological_process	regulation of cell growth
b	0002181	biological_process	cytoplasmic translation
b	0003735	molecular_function	structural constituent of ribosome
b	0005515	molecular_function	protein binding
b	0005737	cellular_component	cytoplasm
b	0005840	cellular_component	ribosome
b	0006412	biological_process	translation
b	0019843	molecular_function	rRNA binding
b	0022625	cellular_component	cytosolic large ribosomal subunit
b	0042256	biological_process	cytosolic ribosome assembly
b	0043022	molecular_function	ribosome binding
b	0090070	biological_process	positive regulation of ribosome biogenesis
b	1902626	biological_process	assembly of large subunit precursor of preribosome
b	1990904	cellular_component	ribonucleoprotein complex
c	0003735	molecular_function	structural constituent of ribosome
c	0005840	cellular_component	ribosome
c	0006412	biological_process	translation
c	0022625	cellular_component	cytosolic large ribosomal subunit
c	1990904	cellular_component	ribonucleoprotein complex
e	0003735	molecular_function	structural constituent of ribosome
e	0005840	cellular_component	ribosome
e	0006412	biological_process	translation
f	0003735	molecular_function	structural constituent of ribosome
f	0006412	biological_process	translation
f	0015934	cellular_component	large ribosomal subunit
g	0002181	biological_process	cytoplasmic translation
g	0003735	molecular_function	structural constituent of ribosome
g	0005737	cellular_component	cytoplasm
g	0005829	cellular_component	cytosol
g	0005840	cellular_component	ribosome
g	0006412	biological_process	translation
g	0006413	biological_process	translational initiation
g	0008270	molecular_function	zinc ion binding
g	0019843	molecular_function	rRNA binding
g	0022625	cellular_component	cytosolic large ribosomal subunit
g	0046872	molecular_function	metal ion binding
g	1904689	biological_process	negative regulation of cytoplasmic translational initiation
g	1990904	cellular_component	ribonucleoprotein complex
h	0000027	biological_process	ribosomal large subunit assembly
h	0002181	biological_process	cytoplasmic translation
h	0003723	molecular_function	RNA binding
h	0003735	molecular_function	structural constituent of ribosome
h	0005515	molecular_function	protein binding
h	0005737	cellular_component	cytoplasm
h	0005829	cellular_component	cytosol
h	0005840	cellular_component	ribosome
h	0006412	biological_process	translation
h	0008270	molecular_function	zinc ion binding
h	0015934	cellular_component	large ribosomal subunit
h	0016740	molecular_function	transferase activity
h	0019843	molecular_function	rRNA binding
h	0022625	cellular_component	cytosolic large ribosomal subunit
h	0032297	biological_process	negative regulation of DNA-templated DNA replication initiation
h	1990082	cellular_component	DnaA-L2 complex
h	1990904	cellular_component	ribonucleoprotein complex
i	0003735	molecular_function	structural constituent of ribosome
i	0006412	biological_process	translation
i	0015934	cellular_component	large ribosomal subunit
j	0000027	biological_process	ribosomal large subunit assembly
j	0002181	biological_process	cytoplasmic translation
j	0003735	molecular_function	structural constituent of ribosome
j	0005515	molecular_function	protein binding
j	0005737	cellular_component	cytoplasm
j	0005829	cellular_component	cytosol
j	0005840	cellular_component	ribosome
j	0006412	biological_process	translation
j	0019843	molecular_function	rRNA binding
j	0022625	cellular_component	cytosolic large ribosomal subunit
j	1990904	cellular_component	ribonucleoprotein complex
k	0003735	molecular_function	structural constituent of ribosome
k	0005840	cellular_component	ribosome
k	0006412	biological_process	translation
l	0003735	molecular_function	structural constituent of ribosome
l	0005840	cellular_component	ribosome
l	0006412	biological_process	translation
l	0019843	molecular_function	rRNA binding
l	1990904	cellular_component	ribonucleoprotein complex
m	0003735	molecular_function	structural constituent of ribosome
m	0005840	cellular_component	ribosome
m	0006412	biological_process	translation
m	1990904	cellular_component	ribonucleoprotein complex
n	0003735	molecular_function	structural constituent of ribosome
n	0005840	cellular_component	ribosome
n	0006412	biological_process	translation
o	0002181	biological_process	cytoplasmic translation
o	0003735	molecular_function	structural constituent of ribosome
o	0005737	cellular_component	cytoplasm
o	0005840	cellular_component	ribosome
o	0006412	biological_process	translation
o	0022625	cellular_component	cytosolic large ribosomal subunit
o	1990904	cellular_component	ribonucleoprotein complex
p	0002181	biological_process	cytoplasmic translation
p	0003735	molecular_function	structural constituent of ribosome
p	0005840	cellular_component	ribosome
p	0006412	biological_process	translation
p	0019843	molecular_function	rRNA binding
p	0022625	cellular_component	cytosolic large ribosomal subunit
p	1990904	cellular_component	ribonucleoprotein complex
q	0003735	molecular_function	structural constituent of ribosome
q	0005737	cellular_component	cytoplasm
q	0005840	cellular_component	ribosome
q	0006412	biological_process	translation
q	1990904	cellular_component	ribonucleoprotein complex
r	0003735	molecular_function	structural constituent of ribosome
r	0005840	cellular_component	ribosome
r	0006412	biological_process	translation
s	0003735	molecular_function	structural constituent of ribosome
s	0005840	cellular_component	ribosome
s	0006412	biological_process	translation
t	0003735	molecular_function	structural constituent of ribosome
t	0005840	cellular_component	ribosome
t	0006412	biological_process	translation
t	0015934	cellular_component	large ribosomal subunit
t	0019843	molecular_function	rRNA binding
t	0022625	cellular_component	cytosolic large ribosomal subunit
t	0070180	molecular_function	large ribosomal subunit rRNA binding
t	1990904	cellular_component	ribonucleoprotein complex
u	0003735	molecular_function	structural constituent of ribosome
u	0005840	cellular_component	ribosome
u	0006412	biological_process	translation
u	0015934	cellular_component	large ribosomal subunit
u	0019843	molecular_function	rRNA binding
u	0022625	cellular_component	cytosolic large ribosomal subunit
u	1990904	cellular_component	ribonucleoprotein complex
v	0000027	biological_process	ribosomal large subunit assembly
v	0000049	molecular_function	tRNA binding
v	0002181	biological_process	cytoplasmic translation
v	0003735	molecular_function	structural constituent of ribosome
v	0005737	cellular_component	cytoplasm
v	0005840	cellular_component	ribosome
v	0006412	biological_process	translation
v	0019843	molecular_function	rRNA binding
v	0022625	cellular_component	cytosolic large ribosomal subunit
v	1990904	cellular_component	ribonucleoprotein complex
w	0003735	molecular_function	structural constituent of ribosome
w	0005840	cellular_component	ribosome
w	0006412	biological_process	translation
x	0003735	molecular_function	structural constituent of ribosome
x	0005840	cellular_component	ribosome
x	0006412	biological_process	translation
y	0003735	molecular_function	structural constituent of ribosome
y	0005840	cellular_component	ribosome
y	0006412	biological_process	translation
z	0000027	biological_process	ribosomal large subunit assembly
z	0003735	molecular_function	structural constituent of ribosome
z	0005840	cellular_component	ribosome
z	0006412	biological_process	translation
z	0019843	molecular_function	rRNA binding
z	1990904	cellular_component	ribonucleoprotein complex

Functional Information from PROSITE/UniProt

site_id	PS00049
Number of Residues	27
Details	RIBOSOMAL_L14 Ribosomal protein L14 signature. AVVVrtkkgvrrp.DGsvirFdgNacVL

Chain	Residue	Details
t	ALA60-LEU86

site_id	PS00050
Number of Residues	16
Details	RIBOSOMAL_L23 Ribosomal protein L23 signature. KKAYVTLKegqnldfV

Chain	Residue	Details
2	LYS81-VAL96

site_id	PS00052
Number of Residues	27
Details	RIBOSOMAL_S7 Ribosomal protein S7 signature. SeLlakFVnilmvdGKKstaesIVysA

Chain	Residue	Details
M	SER20-ALA46

site_id	PS00053
Number of Residues	18
Details	RIBOSOMAL_S8 Ribosomal protein S8 signature. GiaVVSTSkGVMtdraAR

Chain	Residue	Details
N	GLY100-ARG117

site_id	PS00054
Number of Residues	23
Details	RIBOSOMAL_S11 Ribosomal protein S11 signature. IrALnaA.GFrItnitDvTPiPHN

Chain	Residue	Details
Q	ILE97-ASN119

site_id	PS00055
Number of Residues	8
Details	RIBOSOMAL_S12 Ribosomal protein S12 signature. KkPNSAlR

Chain	Residue	Details
R	LYS43-ARG50

site_id	PS00056
Number of Residues	13
Details	RIBOSOMAL_S17 Ribosomal protein S17 signature. GDvVeIrEcRPLS

Chain	Residue	Details
V	GLY56-SER68

site_id	PS00057
Number of Residues	24
Details	RIBOSOMAL_S18 Ribosomal protein S18 signature. IDYkd.IatLknYITEs.GKIvpsRI

Chain	Residue	Details
C	ILE21-ILE44

site_id	PS00061
Number of Residues	29
Details	ADH_SHORT Short-chain dehydrogenases/reductases family signature. PdhkhavialTsiYGVGKTRSkAILaAAG

Chain	Residue	Details
X	PRO10-GLY38

site_id	PS00323
Number of Residues	25
Details	RIBOSOMAL_S19 Ribosomal protein S19 signature. NGRqhvpvfVtdemVGhkLGEFapT

Chain	Residue	Details
W	ASN53-THR77

site_id	PS00358
Number of Residues	17
Details	RIBOSOMAL_L5 Ribosomal protein L5 signature. LaaISGQkpLiTkARkS

Chain	Residue	Details
n	LEU57-SER73

site_id	PS00359
Number of Residues	16
Details	RIBOSOMAL_L11 Ribosomal protein L11 signature. RsIeGTarSMGlVVeD

Chain	Residue	Details
Y	ARG126-ASP141

site_id	PS00360
Number of Residues	19
Details	RIBOSOMAL_S9 Ribosomal protein S9 signature. GGGisGQagAirhGiTRAL

Chain	Residue	Details
O	GLY69-LEU87

site_id	PS00361
Number of Residues	16
Details	RIBOSOMAL_S10 Ribosomal protein S10 signature. AkrtGAqvrGPIpLPT

Chain	Residue	Details
P	ALA29-THR44

site_id	PS00362
Number of Residues	31
Details	RIBOSOMAL_S15 Ribosomal protein S15 signature. LqgHFaehKkDhhSrrgLlrMvsqrrkLldY

Chain	Residue	Details
T	LEU39-TYR69

site_id	PS00430
Number of Residues	66
Details	TONB_DEPENDENT_REC_1 TonB-dependent receptor (TBDR) proteins signature 1. mireerllkvlraphvsekastameksntivlkvakdatkaeikaavqklfevevevv.........................................................NTLVVKGK

Chain	Residue	Details
2	MET1-LYS66

site_id	PS00464
Number of Residues	25
Details	RIBOSOMAL_L22 Ribosomal protein L22 signature. KriMpRAkGRadrilkrtSHITVvV

Chain	Residue	Details
1	LYS83-VAL107

site_id	PS00467
Number of Residues	12
Details	RIBOSOMAL_L2 Ribosomal protein L2 signature. PtvRGTAmNPvD

Chain	Residue	Details
h	PRO218-ASP229

site_id	PS00474
Number of Residues	24
Details	RIBOSOMAL_L3 Ribosomal protein L3 signature. FadvkkvDvtGtSkGKGfaGtvkR

Chain	Residue	Details
j	PHE101-ARG124

site_id	PS00475
Number of Residues	31
Details	RIBOSOMAL_L15 Ribosomal protein L15 signature. KVILaGeVttp..VtVrglrVTkgAraaIeaaG

Chain	Residue	Details
u	LYS109-GLY139

site_id	PS00525
Number of Residues	9
Details	RIBOSOMAL_L6_1 Ribosomal protein L6 signature 1. PEpYKGKGV

Chain	Residue	Details
p	PRO154-VAL162

site_id	PS00527
Number of Residues	23
Details	RIBOSOMAL_S14 Ribosomal protein S14 signature. R.CrqtgrphgflrkFGLSRiKVR

Chain	Residue	Details
S	ARG63-ARG85

site_id	PS00548
Number of Residues	35
Details	RIBOSOMAL_S3 Ribosomal protein S3 signature. ARtewyreGrVplHt..LradIDyntseahTtyGviG

Chain	Residue	Details
I	ALA163-GLY197

site_id	PS00579
Number of Residues	15
Details	RIBOSOMAL_L29 Ribosomal protein L29 signature. QSHLLKqVRRDVARV

Chain	Residue	Details
e	GLN39-VAL53

site_id	PS00582
Number of Residues	20
Details	RIBOSOMAL_L33 Ribosomal protein L33 signature. YtTtKNkrtkPekLElkKFD

Chain	Residue	Details
k	TYR21-ASP40

site_id	PS00585
Number of Residues	33
Details	RIBOSOMAL_S5 Ribosomal protein S5 signature. GRifsFtAltVVGDgn.GrVGfGygkar.EVpa.AI

Chain	Residue	Details
K	GLY28-ILE60

site_id	PS00586
Number of Residues	12
Details	RIBOSOMAL_L16_1 Ribosomal protein L16 signature 1. KRqGKIWIRVFP

Chain	Residue	Details
v	LYS58-PRO69

site_id	PS00632
Number of Residues	25
Details	RIBOSOMAL_S4 Ribosomal protein S4 signature. LEgRLdnvVYRmgfGaTraeARqLV

Chain	Residue	Details
J	LEU94-VAL118

site_id	PS00634
Number of Residues	33
Details	RIBOSOMAL_L30 Ribosomal protein L30 signature. TLlgLgLrRigHtVeredtpairgMInaVsfMV

Chain	Residue	Details
f	THR23-VAL55

site_id	PS00646
Number of Residues	14
Details	RIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGlRHrrGlpVRGQ

Chain	Residue	Details
X	ARG87-GLN100

site_id	PS00651
Number of Residues	28
Details	RIBOSOMAL_L9 Ribosomal protein L9 signature. GslGdqvnVkaGYarNFLvpqgkAvpaT

Chain	Residue	Details
r	GLY13-THR40

site_id	PS00701
Number of Residues	12
Details	RIBOSOMAL_L16_2 Ribosomal protein L16 signature 2. RMGkGKGnveyW

Chain	Residue	Details
v	ARG81-TRP92

site_id	PS00732
Number of Residues	10
Details	RIBOSOMAL_S16 Ribosomal protein S16 signature. VtIRLARHGA

Chain	Residue	Details
U	VAL2-ALA11

site_id	PS00783
Number of Residues	23
Details	RIBOSOMAL_L13 Ribosomal protein L13 signature. VKGMLPkgpl.GRamfrkLkVYaG

Chain	Residue	Details
s	VAL105-GLY127

site_id	PS00784
Number of Residues	20
Details	RIBOSOMAL_L34 Ribosomal protein L34 signature. KRTFQpsvlkRnrsh.GFraR

Chain	Residue	Details
m	LYS2-ARG21

site_id	PS00828
Number of Residues	27
Details	RIBOSOMAL_L36 Ribosomal protein L36 signature. CrnCkiVkRdgvIrViCsaepKHkQrQ

Chain	Residue	Details
q	CYS11-GLN37

site_id	PS00831
Number of Residues	15
Details	RIBOSOMAL_L27 Ribosomal protein L27 signature. GsIIvRQRGtkfhaG

Chain	Residue	Details
b	GLY34-GLY48

site_id	PS00936
Number of Residues	27
Details	RIBOSOMAL_L35 Ribosomal protein L35 signature. KTVrGAaKRFkktgkggfkhkhanl.RH

Chain	Residue	Details
o	LYS5-HIS31

site_id	PS00937
Number of Residues	17
Details	RIBOSOMAL_L20 Ribosomal protein L20 signature. KrqfRqLWIARINaaaR

Chain	Residue	Details
z	LYS54-ARG70

site_id	PS00962
Number of Residues	12
Details	RIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. MrDMLKAGVHFG

Chain	Residue	Details
G	MET6-GLY17

site_id	PS00963
Number of Residues	25
Details	RIBOSOMAL_S2_2 Ribosomal protein S2 signature 2. PdaLFViDadhEhiaIkEannlGIP

Chain	Residue	Details
G	PRO158-PRO182

site_id	PS01015
Number of Residues	16
Details	RIBOSOMAL_L19 Ribosomal protein L19 signature. VkRrGAVR.KAKLYYLR

Chain	Residue	Details
y	VAL86-ARG101

site_id	PS01048
Number of Residues	10
Details	RIBOSOMAL_S6 Ribosomal protein S6 signature. GrRQLAYpIN

Chain	Residue	Details
L	GLY43-ASN52

site_id	PS01108
Number of Residues	18
Details	RIBOSOMAL_L24 Ribosomal protein L24 signature. DDeViVLtGkdKGkr.GkV

Chain	Residue	Details
3	ASP8-VAL25

site_id	PS01109
Number of Residues	35
Details	RIBOSOMAL_L10 Ribosomal protein L10 signature. KqaIvaeVSevakgalsaVvaDsrGVTVdKMteLR

Chain	Residue	Details
9	LYS8-ARG42

site_id	PS01143
Number of Residues	22
Details	RIBOSOMAL_L31 Ribosomal protein L31 signature. DVcskcHPFFTgkqrdvatg....GR

Chain	Residue	Details
g	ASP35-ARG56

site_id	PS01166
Number of Residues	13
Details	RNA_POL_BETA RNA polymerases beta chain signature. GdKMAGrHGNKGV

Chain	Residue	Details
AA	GLY1063-VAL1075

site_id	PS01167
Number of Residues	23
Details	RIBOSOMAL_L17 Ribosomal protein L17 signature. IkTTlpKaKelrrvvEpLITlAK

Chain	Residue	Details
w	ILE34-LYS56

site_id	PS01169
Number of Residues	23
Details	RIBOSOMAL_L21 Ribosomal protein L21 signature. VkivKfrrRKhyrkqqGHRQwfT

Chain	Residue	Details
0	VAL72-THR94

site_id	PS01181
Number of Residues	13
Details	RIBOSOMAL_S21 Ribosomal protein S21 signature. DvALRRFKRsceK

Chain	Residue	Details
F	ASP13-LYS25

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	1
Details	MOD_RES: N-acetylserine; in L7 => ECO:0000269\|PubMed:4573678

Chain	Residue	Details
Z	SER1
AE	CYS895
AE	CYS898
H	ARG142
AE	CYS85
AE	CYS88
AE	ASP460
AE	ASP462
AE	ASP464
AE	CYS814
AE	CYS888

site_id	SWS_FT_FI2
Number of Residues	1
Details	MOD_RES: N6-methyllysine; partial => ECO:0000269\|PubMed:4573678

Chain	Residue	Details
Z	LYS81
H	LYS279
H	LYS363

site_id	SWS_FT_FI3
Number of Residues	2
Details	MOD_RES: N6-acetyllysine; by PatZ => ECO:0000269\|PubMed:21696463

Chain	Residue	Details
AC	LYS298
AD	LYS298

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		Validation report (PDF)