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8SML

hPAD4 bound to inhibitory Fab hI365

Functional Information from GO Data
ChainGOidnamespacecontents
A0004668molecular_functionprotein-arginine deiminase activity
A0005509molecular_functioncalcium ion binding
A0005515molecular_functionprotein binding
A0005634cellular_componentnucleus
A0005654cellular_componentnucleoplasm
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006325biological_processchromatin organization
A0006334biological_processnucleosome assembly
A0006338biological_processchromatin remodeling
A0016787molecular_functionhydrolase activity
A0019827biological_processstem cell population maintenance
A0032991cellular_componentprotein-containing complex
A0036211biological_processprotein modification process
A0042802molecular_functionidentical protein binding
A0043687biological_processpost-translational protein modification
A0045087biological_processinnate immune response
A0046872molecular_functionmetal ion binding
A0140794molecular_functionhistone arginine deiminase activity
A0140795molecular_functionhistone H3R2 arginine deiminase activity
A0140796molecular_functionhistone H3R8 arginine deiminase activity
A0140797molecular_functionhistone H3R17 arginine deiminase activity
A0140798molecular_functionhistone H3R26 arginine deiminase activity
D0004668molecular_functionprotein-arginine deiminase activity
D0005509molecular_functioncalcium ion binding
D0005515molecular_functionprotein binding
D0005634cellular_componentnucleus
D0005654cellular_componentnucleoplasm
D0005737cellular_componentcytoplasm
D0005829cellular_componentcytosol
D0006325biological_processchromatin organization
D0006334biological_processnucleosome assembly
D0006338biological_processchromatin remodeling
D0016787molecular_functionhydrolase activity
D0019827biological_processstem cell population maintenance
D0032991cellular_componentprotein-containing complex
D0036211biological_processprotein modification process
D0042802molecular_functionidentical protein binding
D0043687biological_processpost-translational protein modification
D0045087biological_processinnate immune response
D0046872molecular_functionmetal ion binding
D0140794molecular_functionhistone arginine deiminase activity
D0140795molecular_functionhistone H3R2 arginine deiminase activity
D0140796molecular_functionhistone H3R8 arginine deiminase activity
D0140797molecular_functionhistone H3R17 arginine deiminase activity
D0140798molecular_functionhistone H3R26 arginine deiminase activity
Functional Information from PROSITE/UniProt
site_idPS00290
Number of Residues7
DetailsIG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YACEVTH
ChainResidueDetails
BTYR192-HIS198
CTYR207-HIS213

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsACT_SITE: ACT_SITE => ECO:0000269|PubMed:15247907
ChainResidueDetails
AASP350
AHIS471
AASP473
ACYS645
DASP350
DHIS471
DASP473
DCYS645

site_idSWS_FT_FI2
Number of Residues36
DetailsBINDING: BINDING => ECO:0000269|PubMed:15247907, ECO:0000269|PubMed:16567635, ECO:0000269|PubMed:17002273
ChainResidueDetails
AASN153
AGLU351
AGLU353
AASP369
ASER370
AASN373
AASP388
APHE407
ALEU410
AGLU411
DASN153
AASP155
DASP155
DASP157
DASP165
DASP168
DGLU170
DASP176
DASP179
DGLN349
DGLU351
DGLU353
AASP157
DASP369
DSER370
DASN373
DASP388
DPHE407
DLEU410
DGLU411
AASP165
AASP168
AGLU170
AASP176
AASP179
AGLN349

site_idSWS_FT_FI3
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:21882827
ChainResidueDetails
AARG374
AARG639
DARG374
DARG639

site_idSWS_FT_FI4
Number of Residues12
DetailsMOD_RES: Citrulline => ECO:0000269|PubMed:20201080
ChainResidueDetails
AARG205
DARG372
DARG374
DARG383
AARG212
AARG218
AARG372
AARG374
AARG383
DARG205
DARG212
DARG218

Catalytic Information from CSA
site_idMCSA1
Number of Residues4
DetailsM-CSA 594
ChainResidueDetails
AASP350electrostatic stabiliser
AHIS471proton acceptor, proton donor
AASP473electrostatic stabiliser
ACYS645nucleofuge, nucleophile, proton acceptor, proton donor

site_idMCSA2
Number of Residues4
DetailsM-CSA 594
ChainResidueDetails
DASP350electrostatic stabiliser
DHIS471proton acceptor, proton donor
DASP473electrostatic stabiliser
DCYS645nucleofuge, nucleophile, proton acceptor, proton donor

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PDB entries from 2024-07-24

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