Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

8R57

CryoEM structure of wheat 40S ribosomal subunit, head domain

Functional Information from GO Data

Chain	GOid	namespace	contents
c	0000028	biological_process	ribosomal small subunit assembly
c	0003735	molecular_function	structural constituent of ribosome
c	0005840	cellular_component	ribosome
c	0006412	biological_process	translation
c	0022627	cellular_component	cytosolic small ribosomal subunit
c	0030490	biological_process	maturation of SSU-rRNA
d	0002181	biological_process	cytoplasmic translation
d	0003735	molecular_function	structural constituent of ribosome
d	0005840	cellular_component	ribosome
d	0006412	biological_process	translation
d	0008270	molecular_function	zinc ion binding
d	0022627	cellular_component	cytosolic small ribosomal subunit
d	0046872	molecular_function	metal ion binding
d	1990904	cellular_component	ribonucleoprotein complex
f	0003729	molecular_function	mRNA binding
f	0003735	molecular_function	structural constituent of ribosome
f	0005634	cellular_component	nucleus
f	0005737	cellular_component	cytoplasm
f	0005840	cellular_component	ribosome
f	0006412	biological_process	translation
f	0016567	biological_process	protein ubiquitination
f	0019941	biological_process	modification-dependent protein catabolic process
f	0031386	molecular_function	protein tag activity
f	0031625	molecular_function	ubiquitin protein ligase binding
f	0046872	molecular_function	metal ion binding
f	1990904	cellular_component	ribonucleoprotein complex
F	0003723	molecular_function	RNA binding
F	0003735	molecular_function	structural constituent of ribosome
F	0005634	cellular_component	nucleus
F	0005840	cellular_component	ribosome
F	0006412	biological_process	translation
F	0015935	cellular_component	small ribosomal subunit
F	0022626	cellular_component	cytosolic ribosome
F	0022627	cellular_component	cytosolic small ribosomal subunit
F	1990904	cellular_component	ribonucleoprotein complex
g	0001934	biological_process	positive regulation of protein phosphorylation
g	0005080	molecular_function	protein kinase C binding
g	0005634	cellular_component	nucleus
g	0005829	cellular_component	cytosol
g	0006417	biological_process	regulation of translation
g	0043022	molecular_function	ribosome binding
g	0045182	molecular_function	translation regulator activity
g	0072344	biological_process	rescue of stalled ribosome
h	0003735	molecular_function	structural constituent of ribosome
h	0005840	cellular_component	ribosome
h	0006412	biological_process	translation
h	1990904	cellular_component	ribonucleoprotein complex
K	0003723	molecular_function	RNA binding
K	0003735	molecular_function	structural constituent of ribosome
K	0005737	cellular_component	cytoplasm
K	0022627	cellular_component	cytosolic small ribosomal subunit
M	0003735	molecular_function	structural constituent of ribosome
M	0005840	cellular_component	ribosome
M	0006412	biological_process	translation
M	0022627	cellular_component	cytosolic small ribosomal subunit
M	0042274	biological_process	ribosomal small subunit biogenesis
M	1990145	biological_process	maintenance of translational fidelity
M	1990904	cellular_component	ribonucleoprotein complex
P	0000028	biological_process	ribosomal small subunit assembly
P	0003723	molecular_function	RNA binding
P	0003729	molecular_function	mRNA binding
P	0003735	molecular_function	structural constituent of ribosome
P	0005840	cellular_component	ribosome
P	0006412	biological_process	translation
P	0015935	cellular_component	small ribosomal subunit
P	0019843	molecular_function	rRNA binding
P	0022627	cellular_component	cytosolic small ribosomal subunit
P	1990904	cellular_component	ribonucleoprotein complex
Q	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Q	0003723	molecular_function	RNA binding
Q	0003735	molecular_function	structural constituent of ribosome
Q	0005840	cellular_component	ribosome
Q	0006412	biological_process	translation
Q	0022627	cellular_component	cytosolic small ribosomal subunit
Q	1990904	cellular_component	ribonucleoprotein complex
R	0000028	biological_process	ribosomal small subunit assembly
R	0003723	molecular_function	RNA binding
R	0003735	molecular_function	structural constituent of ribosome
R	0005840	cellular_component	ribosome
R	0006412	biological_process	translation
R	0015935	cellular_component	small ribosomal subunit
R	0022627	cellular_component	cytosolic small ribosomal subunit
R	1990904	cellular_component	ribonucleoprotein complex
S	0003676	molecular_function	nucleic acid binding
S	0003723	molecular_function	RNA binding
S	0003735	molecular_function	structural constituent of ribosome
S	0005829	cellular_component	cytosol
S	0005840	cellular_component	ribosome
S	0006412	biological_process	translation
S	0015935	cellular_component	small ribosomal subunit
S	1990904	cellular_component	ribonucleoprotein complex
T	0003735	molecular_function	structural constituent of ribosome
T	0005840	cellular_component	ribosome
T	0006412	biological_process	translation
T	1990904	cellular_component	ribonucleoprotein complex
U	0003735	molecular_function	structural constituent of ribosome
U	0005840	cellular_component	ribosome
U	0006412	biological_process	translation
U	0015935	cellular_component	small ribosomal subunit
U	1990904	cellular_component	ribonucleoprotein complex
Z	0003735	molecular_function	structural constituent of ribosome
Z	0005840	cellular_component	ribosome
Z	0022627	cellular_component	cytosolic small ribosomal subunit
Z	1990904	cellular_component	ribonucleoprotein complex

Functional Information from PROSITE/UniProt

site_id	PS00052
Number of Residues	27
Details	RIBOSOMAL_S7 Ribosomal protein S7 signature. ErLtnsLMmhgrnnGKKimavrIIkhT

Chain	Residue	Details
P	GLU66-THR92

site_id	PS00299
Number of Residues	26
Details	UBIQUITIN_1 Ubiquitin domain signature. KakIqDkegIPpdqQrLIFaGkqleD

Chain	Residue	Details
f	LYS-49-ASP-24

site_id	PS00323
Number of Residues	25
Details	RIBOSOMAL_S19 Ribosomal protein S19 signature. NGKcfnqveIkpemIGhyLAEFslS

Chain	Residue	Details
R	ASN106-SER130

site_id	PS00360
Number of Residues	19
Details	RIBOSOMAL_S9 Ribosomal protein S9 signature. GGGktSQiySirqAiAKSL

Chain	Residue	Details
Q	GLY77-LEU95

site_id	PS00548
Number of Residues	37
Details	RIBOSOMAL_S3 Ribosomal protein S3 signature. AKsmkfkdGyMisSgqpVneyIDaavrhvlLrqGvlG

Chain	Residue	Details
F	ALA147-GLY183

site_id	PS00628
Number of Residues	20
Details	RIBOSOMAL_S19E Ribosomal protein S19e signature. PphfcksSgaVsRnILQeLQ

Chain	Residue	Details
T	PRO102-GLN121

site_id	PS00646
Number of Residues	14
Details	RIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGlRHywGvrVRGQ

Chain	Residue	Details
S	ARG121-GLN134

site_id	PS00678
Number of Residues	15
Details	WD_REPEATS_1 Trp-Asp (WD) repeats signature. IVSSsrDkSLLVWDL

Chain	Residue	Details
g	ILE34-LEU48
g	ALA88-LEU102
g	ILE130-THR144
g	ILE180-LEU194
g	CYS222-LEU236

site_id	PS00961
Number of Residues	9
Details	RIBOSOMAL_S28E Ribosomal protein S28e signature. ESEREARrL

Chain	Residue	Details
c	GLU56-LEU64

site_id	PS01189
Number of Residues	19
Details	RIBOSOMAL_S12E Ribosomal protein S12e signature. ALQlvMkkSsahDGLvkGL

Chain	Residue	Details
M	ALA30-LEU48

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	4
Details	BINDING: BINDING => ECO:0000255

Chain	Residue	Details
d	CYS21
d	CYS24
d	CYS39
d	CYS42

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		PDB format (full)
		Validation report (PDF)