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8QHQ

Crystal structure of human DNPH1 bound to hmdUMP

Functional Information from GO Data
ChainGOidnamespacecontents
A0009159biological_processdeoxyribonucleoside monophosphate catabolic process
A0070694molecular_function5-hydroxymethyl-dUMP N-hydrolase activity
B0009159biological_processdeoxyribonucleoside monophosphate catabolic process
B0070694molecular_function5-hydroxymethyl-dUMP N-hydrolase activity
C0009159biological_processdeoxyribonucleoside monophosphate catabolic process
C0070694molecular_function5-hydroxymethyl-dUMP N-hydrolase activity
D0009159biological_processdeoxyribonucleoside monophosphate catabolic process
D0070694molecular_function5-hydroxymethyl-dUMP N-hydrolase activity
E0009159biological_processdeoxyribonucleoside monophosphate catabolic process
E0070694molecular_function5-hydroxymethyl-dUMP N-hydrolase activity
F0009159biological_processdeoxyribonucleoside monophosphate catabolic process
F0070694molecular_function5-hydroxymethyl-dUMP N-hydrolase activity
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues42
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"25108359","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4P5E","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues6
DetailsBinding site: {"description":"in other chain","evidences":[{"source":"PubMed","id":"25108359","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4P5E","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues6
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"18669648","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues18
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"24275569","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues6
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

239803

PDB entries from 2025-08-06

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