8QBN
Structure of the non-canonical CTLH E3 substrate receptor WDR26 bound to YPEL5
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| 7 | 0000151 | cellular_component | ubiquitin ligase complex |
| 7 | 0005515 | molecular_function | protein binding |
| 7 | 0005634 | cellular_component | nucleus |
| 7 | 0005654 | cellular_component | nucleoplasm |
| 7 | 0005737 | cellular_component | cytoplasm |
| 7 | 0005739 | cellular_component | mitochondrion |
| 7 | 0005829 | cellular_component | cytosol |
| 7 | 0034657 | cellular_component | GID complex |
| 7 | 0043161 | biological_process | proteasome-mediated ubiquitin-dependent protein catabolic process |
| W | 0000151 | cellular_component | ubiquitin ligase complex |
| W | 0005515 | molecular_function | protein binding |
| W | 0005634 | cellular_component | nucleus |
| W | 0005654 | cellular_component | nucleoplasm |
| W | 0005737 | cellular_component | cytoplasm |
| W | 0005739 | cellular_component | mitochondrion |
| W | 0005829 | cellular_component | cytosol |
| W | 0034657 | cellular_component | GID complex |
| W | 0043161 | biological_process | proteasome-mediated ubiquitin-dependent protein catabolic process |
| Y | 0000151 | cellular_component | ubiquitin ligase complex |
| Y | 0000922 | cellular_component | spindle pole |
| Y | 0005515 | molecular_function | protein binding |
| Y | 0005576 | cellular_component | extracellular region |
| Y | 0005634 | cellular_component | nucleus |
| Y | 0005813 | cellular_component | centrosome |
| Y | 0008283 | biological_process | cell population proliferation |
| Y | 0030496 | cellular_component | midbody |
| Y | 0043161 | biological_process | proteasome-mediated ubiquitin-dependent protein catabolic process |
| Y | 0046872 | molecular_function | metal ion binding |
| Y | 0097431 | cellular_component | mitotic spindle pole |
| Y | 1904724 | cellular_component | tertiary granule lumen |
| Y | 1904813 | cellular_component | ficolin-1-rich granule lumen |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 64 |
| Details | Domain: {"description":"LisH","evidences":[{"source":"PROSITE-ProRule","id":"PRU00126","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 78 |
| Details | Repeat: {"description":"WD 1"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 78 |
| Details | Repeat: {"description":"WD 2"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 80 |
| Details | Repeat: {"description":"WD 3"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 78 |
| Details | Repeat: {"description":"WD 4"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 84 |
| Details | Repeat: {"description":"WD 5"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"18669648","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"20068231","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"21406692","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"24275569","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI8 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"24275569","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI9 |
| Number of Residues | 97 |
| Details | Domain: {"description":"Yippee","evidences":[{"source":"PROSITE-ProRule","id":"PRU01128","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI10 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU01128","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI11 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P62700","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
