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8Q4F

Structure of arbekacin bound Escherichia coli 70S ribosome

This is a non-PDB format compatible entry.
Functional Information from GO Data
ChainGOidnamespacecontents
00000027biological_processribosomal large subunit assembly
00000049molecular_functiontRNA binding
00002181biological_processcytoplasmic translation
00003735molecular_functionstructural constituent of ribosome
00005737cellular_componentcytoplasm
00005829cellular_componentcytosol
00005840cellular_componentribosome
00006412biological_processtranslation
00022625cellular_componentcytosolic large ribosomal subunit
00046677biological_processresponse to antibiotic
01990904cellular_componentribonucleoprotein complex
10002181biological_processcytoplasmic translation
10005515molecular_functionprotein binding
10005737cellular_componentcytoplasm
10005840cellular_componentribosome
10006412biological_processtranslation
10022625cellular_componentcytosolic large ribosomal subunit
11990904cellular_componentribonucleoprotein complex
20002181biological_processcytoplasmic translation
20003735molecular_functionstructural constituent of ribosome
20005737cellular_componentcytoplasm
20005840cellular_componentribosome
20006412biological_processtranslation
20022625cellular_componentcytosolic large ribosomal subunit
21990904cellular_componentribonucleoprotein complex
30002181biological_processcytoplasmic translation
30005737cellular_componentcytoplasm
30005840cellular_componentribosome
30006412biological_processtranslation
30019843molecular_functionrRNA binding
30022625cellular_componentcytosolic large ribosomal subunit
31990904cellular_componentribonucleoprotein complex
40002181biological_processcytoplasmic translation
40005737cellular_componentcytoplasm
40005829cellular_componentcytosol
40005840cellular_componentribosome
40006412biological_processtranslation
40006413biological_processtranslational initiation
40008270molecular_functionzinc ion binding
40019843molecular_functionrRNA binding
40022625cellular_componentcytosolic large ribosomal subunit
40046872molecular_functionmetal ion binding
41904689biological_processnegative regulation of cytoplasmic translational initiation
41990904cellular_componentribonucleoprotein complex
B0000028biological_processribosomal small subunit assembly
B0002181biological_processcytoplasmic translation
B0003735molecular_functionstructural constituent of ribosome
B0005515molecular_functionprotein binding
B0005737cellular_componentcytoplasm
B0005840cellular_componentribosome
B0006412biological_processtranslation
B0008270molecular_functionzinc ion binding
B0022627cellular_componentcytosolic small ribosomal subunit
B1990904cellular_componentribonucleoprotein complex
C0000028biological_processribosomal small subunit assembly
C0002181biological_processcytoplasmic translation
C0003729molecular_functionmRNA binding
C0003735molecular_functionstructural constituent of ribosome
C0005737cellular_componentcytoplasm
C0005829cellular_componentcytosol
C0005840cellular_componentribosome
C0006412biological_processtranslation
C0019843molecular_functionrRNA binding
C0022627cellular_componentcytosolic small ribosomal subunit
C1990904cellular_componentribonucleoprotein complex
D0000028biological_processribosomal small subunit assembly
D0000900molecular_functionmRNA regulatory element binding translation repressor activity
D0002181biological_processcytoplasmic translation
D0003735molecular_functionstructural constituent of ribosome
D0005515molecular_functionprotein binding
D0005737cellular_componentcytoplasm
D0005829cellular_componentcytosol
D0005840cellular_componentribosome
D0006353biological_processDNA-templated transcription termination
D0006412biological_processtranslation
D0006417biological_processregulation of translation
D0015935cellular_componentsmall ribosomal subunit
D0019843molecular_functionrRNA binding
D0022627cellular_componentcytosolic small ribosomal subunit
D0031564biological_processtranscription antitermination
D0042254biological_processribosome biogenesis
D0042274biological_processribosomal small subunit biogenesis
D0045947biological_processnegative regulation of translational initiation
D0046677biological_processresponse to antibiotic
D0048027molecular_functionmRNA 5'-UTR binding
D1990145biological_processmaintenance of translational fidelity
D1990904cellular_componentribonucleoprotein complex
E0000028biological_processribosomal small subunit assembly
E0002181biological_processcytoplasmic translation
E0003735molecular_functionstructural constituent of ribosome
E0005515molecular_functionprotein binding
E0005737cellular_componentcytoplasm
E0005829cellular_componentcytosol
E0005840cellular_componentribosome
E0006412biological_processtranslation
E0019843molecular_functionrRNA binding
E0022627cellular_componentcytosolic small ribosomal subunit
E0046677biological_processresponse to antibiotic
E1990145biological_processmaintenance of translational fidelity
E1990904cellular_componentribonucleoprotein complex
F0002181biological_processcytoplasmic translation
F0003735molecular_functionstructural constituent of ribosome
F0005515molecular_functionprotein binding
F0005737cellular_componentcytoplasm
F0005829cellular_componentcytosol
F0005840cellular_componentribosome
F0006412biological_processtranslation
F0019843molecular_functionrRNA binding
F0022627cellular_componentcytosolic small ribosomal subunit
F0048027molecular_functionmRNA 5'-UTR binding
F0070181molecular_functionsmall ribosomal subunit rRNA binding
F1990904cellular_componentribonucleoprotein complex
G0000028biological_processribosomal small subunit assembly
G0000049molecular_functiontRNA binding
G0002181biological_processcytoplasmic translation
G0003729molecular_functionmRNA binding
G0003735molecular_functionstructural constituent of ribosome
G0005515molecular_functionprotein binding
G0005737cellular_componentcytoplasm
G0005829cellular_componentcytosol
G0005840cellular_componentribosome
G0006412biological_processtranslation
G0016020cellular_componentmembrane
G0017148biological_processnegative regulation of translation
G0019843molecular_functionrRNA binding
G0022627cellular_componentcytosolic small ribosomal subunit
G1990904cellular_componentribonucleoprotein complex
H0000028biological_processribosomal small subunit assembly
H0002181biological_processcytoplasmic translation
H0003735molecular_functionstructural constituent of ribosome
H0005737cellular_componentcytoplasm
H0005829cellular_componentcytosol
H0005840cellular_componentribosome
H0006412biological_processtranslation
H0006417biological_processregulation of translation
H0019843molecular_functionrRNA binding
H0022627cellular_componentcytosolic small ribosomal subunit
H0043488biological_processregulation of mRNA stability
H1990904cellular_componentribonucleoprotein complex
I0000049molecular_functiontRNA binding
I0002181biological_processcytoplasmic translation
I0003723molecular_functionRNA binding
I0003735molecular_functionstructural constituent of ribosome
I0005737cellular_componentcytoplasm
I0005829cellular_componentcytosol
I0005840cellular_componentribosome
I0006412biological_processtranslation
I0022627cellular_componentcytosolic small ribosomal subunit
I0043232cellular_componentintracellular membraneless organelle
I1990904cellular_componentribonucleoprotein complex
J0000049molecular_functiontRNA binding
J0001072molecular_functiontranscription antitermination factor activity, RNA binding
J0002181biological_processcytoplasmic translation
J0003723molecular_functionRNA binding
J0003735molecular_functionstructural constituent of ribosome
J0005515molecular_functionprotein binding
J0005737cellular_componentcytoplasm
J0005829cellular_componentcytosol
J0005840cellular_componentribosome
J0006412biological_processtranslation
J0008023cellular_componenttranscription elongation factor complex
J0015935cellular_componentsmall ribosomal subunit
J0022627cellular_componentcytosolic small ribosomal subunit
J0031564biological_processtranscription antitermination
J0032784biological_processregulation of DNA-templated transcription elongation
J0042254biological_processribosome biogenesis
J1990904cellular_componentribonucleoprotein complex
K0002181biological_processcytoplasmic translation
K0003735molecular_functionstructural constituent of ribosome
K0005515molecular_functionprotein binding
K0005737cellular_componentcytoplasm
K0005829cellular_componentcytosol
K0005840cellular_componentribosome
K0006412biological_processtranslation
K0019843molecular_functionrRNA binding
K0022627cellular_componentcytosolic small ribosomal subunit
K0070181molecular_functionsmall ribosomal subunit rRNA binding
K1990904cellular_componentribonucleoprotein complex
L0000049molecular_functiontRNA binding
L0000372biological_processGroup I intron splicing
L0002181biological_processcytoplasmic translation
L0003735molecular_functionstructural constituent of ribosome
L0005515molecular_functionprotein binding
L0005737cellular_componentcytoplasm
L0005829cellular_componentcytosol
L0005840cellular_componentribosome
L0006412biological_processtranslation
L0019843molecular_functionrRNA binding
L0022627cellular_componentcytosolic small ribosomal subunit
L0033120biological_processpositive regulation of RNA splicing
L0034336molecular_functionmisfolded RNA binding
L0034337biological_processRNA folding
L0046677biological_processresponse to antibiotic
L1990145biological_processmaintenance of translational fidelity
L1990904cellular_componentribonucleoprotein complex
M0000049molecular_functiontRNA binding
M0002181biological_processcytoplasmic translation
M0005515molecular_functionprotein binding
M0005737cellular_componentcytoplasm
M0005829cellular_componentcytosol
M0005840cellular_componentribosome
M0006412biological_processtranslation
M0015935cellular_componentsmall ribosomal subunit
M0019843molecular_functionrRNA binding
M0022627cellular_componentcytosolic small ribosomal subunit
M1990904cellular_componentribonucleoprotein complex
N0000028biological_processribosomal small subunit assembly
N0000049molecular_functiontRNA binding
N0002181biological_processcytoplasmic translation
N0003735molecular_functionstructural constituent of ribosome
N0005737cellular_componentcytoplasm
N0005840cellular_componentribosome
N0006412biological_processtranslation
N0015935cellular_componentsmall ribosomal subunit
N0019843molecular_functionrRNA binding
N0022627cellular_componentcytosolic small ribosomal subunit
N1990904cellular_componentribonucleoprotein complex
O0000028biological_processribosomal small subunit assembly
O0002181biological_processcytoplasmic translation
O0003735molecular_functionstructural constituent of ribosome
O0005737cellular_componentcytoplasm
O0005829cellular_componentcytosol
O0005840cellular_componentribosome
O0006412biological_processtranslation
O0006417biological_processregulation of translation
O0019843molecular_functionrRNA binding
O0022627cellular_componentcytosolic small ribosomal subunit
O0070181molecular_functionsmall ribosomal subunit rRNA binding
O1990904cellular_componentribonucleoprotein complex
P0000028biological_processribosomal small subunit assembly
P0000400molecular_functionfour-way junction DNA binding
P0002181biological_processcytoplasmic translation
P0003735molecular_functionstructural constituent of ribosome
P0004519molecular_functionendonuclease activity
P0004520molecular_functionDNA endonuclease activity
P0005737cellular_componentcytoplasm
P0005840cellular_componentribosome
P0006259biological_processDNA metabolic process
P0006412biological_processtranslation
P0015935cellular_componentsmall ribosomal subunit
P0022627cellular_componentcytosolic small ribosomal subunit
P1990904cellular_componentribonucleoprotein complex
Q0000028biological_processribosomal small subunit assembly
Q0002181biological_processcytoplasmic translation
Q0003735molecular_functionstructural constituent of ribosome
Q0005737cellular_componentcytoplasm
Q0005840cellular_componentribosome
Q0006412biological_processtranslation
Q0008270molecular_functionzinc ion binding
Q0019843molecular_functionrRNA binding
Q0022627cellular_componentcytosolic small ribosomal subunit
Q0046677biological_processresponse to antibiotic
Q0070181molecular_functionsmall ribosomal subunit rRNA binding
Q1990904cellular_componentribonucleoprotein complex
R0002181biological_processcytoplasmic translation
R0003735molecular_functionstructural constituent of ribosome
R0005515molecular_functionprotein binding
R0005737cellular_componentcytoplasm
R0005829cellular_componentcytosol
R0005840cellular_componentribosome
R0006412biological_processtranslation
R0019843molecular_functionrRNA binding
R0022627cellular_componentcytosolic small ribosomal subunit
R0048027molecular_functionmRNA 5'-UTR binding
R0070181molecular_functionsmall ribosomal subunit rRNA binding
R1990904cellular_componentribonucleoprotein complex
S0000028biological_processribosomal small subunit assembly
S0000049molecular_functiontRNA binding
S0002181biological_processcytoplasmic translation
S0003735molecular_functionstructural constituent of ribosome
S0005737cellular_componentcytoplasm
S0005829cellular_componentcytosol
S0005840cellular_componentribosome
S0006412biological_processtranslation
S0019843molecular_functionrRNA binding
S0022627cellular_componentcytosolic small ribosomal subunit
S1990904cellular_componentribonucleoprotein complex
T0000028biological_processribosomal small subunit assembly
T0002181biological_processcytoplasmic translation
T0003735molecular_functionstructural constituent of ribosome
T0005737cellular_componentcytoplasm
T0005829cellular_componentcytosol
T0005840cellular_componentribosome
T0006412biological_processtranslation
T0008073molecular_functionornithine decarboxylase inhibitor activity
T0015935cellular_componentsmall ribosomal subunit
T0019843molecular_functionrRNA binding
T0022627cellular_componentcytosolic small ribosomal subunit
T0070181molecular_functionsmall ribosomal subunit rRNA binding
T1990904cellular_componentribonucleoprotein complex
U0000028biological_processribosomal small subunit assembly
U0002181biological_processcytoplasmic translation
U0003735molecular_functionstructural constituent of ribosome
U0005737cellular_componentcytoplasm
U0005829cellular_componentcytosol
U0005840cellular_componentribosome
U0006412biological_processtranslation
U0019843molecular_functionrRNA binding
U0022627cellular_componentcytosolic small ribosomal subunit
U1990904cellular_componentribonucleoprotein complex
c0000027biological_processribosomal large subunit assembly
c0002181biological_processcytoplasmic translation
c0003723molecular_functionRNA binding
c0003735molecular_functionstructural constituent of ribosome
c0005515molecular_functionprotein binding
c0005737cellular_componentcytoplasm
c0005829cellular_componentcytosol
c0005840cellular_componentribosome
c0006412biological_processtranslation
c0008270molecular_functionzinc ion binding
c0019843molecular_functionrRNA binding
c0022625cellular_componentcytosolic large ribosomal subunit
c0032297biological_processnegative regulation of DNA-templated DNA replication initiation
c1990082cellular_componentDnaA-L2 complex
c1990904cellular_componentribonucleoprotein complex
d0000027biological_processribosomal large subunit assembly
d0002181biological_processcytoplasmic translation
d0003735molecular_functionstructural constituent of ribosome
d0005515molecular_functionprotein binding
d0005737cellular_componentcytoplasm
d0005829cellular_componentcytosol
d0005840cellular_componentribosome
d0006412biological_processtranslation
d0019843molecular_functionrRNA binding
d0022625cellular_componentcytosolic large ribosomal subunit
d1990904cellular_componentribonucleoprotein complex
e0001070molecular_functionRNA-binding transcription regulator activity
e0002181biological_processcytoplasmic translation
e0003677molecular_functionDNA binding
e0003735molecular_functionstructural constituent of ribosome
e0005515molecular_functionprotein binding
e0005737cellular_componentcytoplasm
e0005829cellular_componentcytosol
e0005840cellular_componentribosome
e0006353biological_processDNA-templated transcription termination
e0006412biological_processtranslation
e0006417biological_processregulation of translation
e0015934cellular_componentlarge ribosomal subunit
e0017148biological_processnegative regulation of translation
e0019843molecular_functionrRNA binding
e0022625cellular_componentcytosolic large ribosomal subunit
e0030371molecular_functiontranslation repressor activity
e0031555biological_processtranscriptional attenuation
e0042255biological_processribosome assembly
e0045892biological_processnegative regulation of DNA-templated transcription
e0046677biological_processresponse to antibiotic
e0048027molecular_functionmRNA 5'-UTR binding
e0060698molecular_functionendoribonuclease inhibitor activity
e1990904cellular_componentribonucleoprotein complex
e2000766biological_processnegative regulation of cytoplasmic translation
f0000027biological_processribosomal large subunit assembly
f0000049molecular_functiontRNA binding
f0002181biological_processcytoplasmic translation
f0003723molecular_functionRNA binding
f0003735molecular_functionstructural constituent of ribosome
f0005737cellular_componentcytoplasm
f0005829cellular_componentcytosol
f0005840cellular_componentribosome
f0006412biological_processtranslation
f0008097molecular_function5S rRNA binding
f0019843molecular_functionrRNA binding
f0022625cellular_componentcytosolic large ribosomal subunit
f1990904cellular_componentribonucleoprotein complex
g0000027biological_processribosomal large subunit assembly
g0002181biological_processcytoplasmic translation
g0003735molecular_functionstructural constituent of ribosome
g0005737cellular_componentcytoplasm
g0005829cellular_componentcytosol
g0005840cellular_componentribosome
g0006412biological_processtranslation
g0019843molecular_functionrRNA binding
g0022625cellular_componentcytosolic large ribosomal subunit
g0046677biological_processresponse to antibiotic
g0070180molecular_functionlarge ribosomal subunit rRNA binding
g1990904cellular_componentribonucleoprotein complex
i0002181biological_processcytoplasmic translation
i0003729molecular_functionmRNA binding
i0003735molecular_functionstructural constituent of ribosome
i0005737cellular_componentcytoplasm
i0005829cellular_componentcytosol
i0005840cellular_componentribosome
i0006412biological_processtranslation
i0008270molecular_functionzinc ion binding
i0017148biological_processnegative regulation of translation
i0022625cellular_componentcytosolic large ribosomal subunit
i0048027molecular_functionmRNA 5'-UTR binding
i0070180molecular_functionlarge ribosomal subunit rRNA binding
i1990904cellular_componentribonucleoprotein complex
j0002181biological_processcytoplasmic translation
j0003735molecular_functionstructural constituent of ribosome
j0005515molecular_functionprotein binding
j0005737cellular_componentcytoplasm
j0005829cellular_componentcytosol
j0005840cellular_componentribosome
j0006412biological_processtranslation
j0019843molecular_functionrRNA binding
j0022625cellular_componentcytosolic large ribosomal subunit
j0070180molecular_functionlarge ribosomal subunit rRNA binding
j1990904cellular_componentribonucleoprotein complex
k0002181biological_processcytoplasmic translation
k0003735molecular_functionstructural constituent of ribosome
k0005515molecular_functionprotein binding
k0005737cellular_componentcytoplasm
k0005840cellular_componentribosome
k0006412biological_processtranslation
k0019843molecular_functionrRNA binding
k0022625cellular_componentcytosolic large ribosomal subunit
k1990904cellular_componentribonucleoprotein complex
l0000027biological_processribosomal large subunit assembly
l0000049molecular_functiontRNA binding
l0002181biological_processcytoplasmic translation
l0003735molecular_functionstructural constituent of ribosome
l0005737cellular_componentcytoplasm
l0005840cellular_componentribosome
l0006412biological_processtranslation
l0019843molecular_functionrRNA binding
l0022625cellular_componentcytosolic large ribosomal subunit
l1990904cellular_componentribonucleoprotein complex
m0000027biological_processribosomal large subunit assembly
m0002181biological_processcytoplasmic translation
m0003735molecular_functionstructural constituent of ribosome
m0005515molecular_functionprotein binding
m0005737cellular_componentcytoplasm
m0005829cellular_componentcytosol
m0005840cellular_componentribosome
m0006412biological_processtranslation
m0022625cellular_componentcytosolic large ribosomal subunit
m1990904cellular_componentribonucleoprotein complex
n0002181biological_processcytoplasmic translation
n0005737cellular_componentcytoplasm
n0005829cellular_componentcytosol
n0005840cellular_componentribosome
n0006412biological_processtranslation
n0008097molecular_function5S rRNA binding
n0019843molecular_functionrRNA binding
n0022625cellular_componentcytosolic large ribosomal subunit
n1990904cellular_componentribonucleoprotein complex
o0000027biological_processribosomal large subunit assembly
o0002181biological_processcytoplasmic translation
o0003735molecular_functionstructural constituent of ribosome
o0005737cellular_componentcytoplasm
o0005829cellular_componentcytosol
o0005840cellular_componentribosome
o0006412biological_processtranslation
o0019843molecular_functionrRNA binding
o0022625cellular_componentcytosolic large ribosomal subunit
o0070180molecular_functionlarge ribosomal subunit rRNA binding
o1990904cellular_componentribonucleoprotein complex
p0000027biological_processribosomal large subunit assembly
p0000900molecular_functionmRNA regulatory element binding translation repressor activity
p0002181biological_processcytoplasmic translation
p0003729molecular_functionmRNA binding
p0003735molecular_functionstructural constituent of ribosome
p0005737cellular_componentcytoplasm
p0005829cellular_componentcytosol
p0005840cellular_componentribosome
p0017148biological_processnegative regulation of translation
p0019843molecular_functionrRNA binding
p0022625cellular_componentcytosolic large ribosomal subunit
p0070180molecular_functionlarge ribosomal subunit rRNA binding
p1990904cellular_componentribonucleoprotein complex
q0002181biological_processcytoplasmic translation
q0003735molecular_functionstructural constituent of ribosome
q0005737cellular_componentcytoplasm
q0005829cellular_componentcytosol
q0005840cellular_componentribosome
q0006412biological_processtranslation
q0019843molecular_functionrRNA binding
q0022625cellular_componentcytosolic large ribosomal subunit
q1990904cellular_componentribonucleoprotein complex
s0000027biological_processribosomal large subunit assembly
s0002181biological_processcytoplasmic translation
s0003735molecular_functionstructural constituent of ribosome
s0005515molecular_functionprotein binding
s0005737cellular_componentcytoplasm
s0005840cellular_componentribosome
s0006412biological_processtranslation
s0019843molecular_functionrRNA binding
s0022625cellular_componentcytosolic large ribosomal subunit
s1990904cellular_componentribonucleoprotein complex
t0000027biological_processribosomal large subunit assembly
t0002181biological_processcytoplasmic translation
t0003735molecular_functionstructural constituent of ribosome
t0005515molecular_functionprotein binding
t0005737cellular_componentcytoplasm
t0005829cellular_componentcytosol
t0005840cellular_componentribosome
t0006412biological_processtranslation
t0019843molecular_functionrRNA binding
t0022625cellular_componentcytosolic large ribosomal subunit
t0070180molecular_functionlarge ribosomal subunit rRNA binding
t1990904cellular_componentribonucleoprotein complex
u0000027biological_processribosomal large subunit assembly
u0002181biological_processcytoplasmic translation
u0003723molecular_functionRNA binding
u0003735molecular_functionstructural constituent of ribosome
u0005737cellular_componentcytoplasm
u0005829cellular_componentcytosol
u0005840cellular_componentribosome
u0006412biological_processtranslation
u0008097molecular_function5S rRNA binding
u0009314biological_processresponse to radiation
u0017148biological_processnegative regulation of translation
u0019843molecular_functionrRNA binding
u0022625cellular_componentcytosolic large ribosomal subunit
u1990904cellular_componentribonucleoprotein complex
v0000027biological_processribosomal large subunit assembly
v0000049molecular_functiontRNA binding
v0001558biological_processregulation of cell growth
v0002181biological_processcytoplasmic translation
v0003735molecular_functionstructural constituent of ribosome
v0005515molecular_functionprotein binding
v0005737cellular_componentcytoplasm
v0005840cellular_componentribosome
v0006412biological_processtranslation
v0019843molecular_functionrRNA binding
v0022625cellular_componentcytosolic large ribosomal subunit
v0042256biological_processcytosolic ribosome assembly
v0043022molecular_functionribosome binding
v0090070biological_processpositive regulation of ribosome biogenesis
v1902626biological_processassembly of large subunit precursor of preribosome
v1990904cellular_componentribonucleoprotein complex
w0000027biological_processribosomal large subunit assembly
w0002181biological_processcytoplasmic translation
w0003735molecular_functionstructural constituent of ribosome
w0005515molecular_functionprotein binding
w0005737cellular_componentcytoplasm
w0005829cellular_componentcytosol
w0005840cellular_componentribosome
w0006412biological_processtranslation
w0019843molecular_functionrRNA binding
w0022625cellular_componentcytosolic large ribosomal subunit
w1990904cellular_componentribonucleoprotein complex
x0000027biological_processribosomal large subunit assembly
x0002181biological_processcytoplasmic translation
x0003735molecular_functionstructural constituent of ribosome
x0005737cellular_componentcytoplasm
x0005840cellular_componentribosome
x0006412biological_processtranslation
x0019843molecular_functionrRNA binding
x0022625cellular_componentcytosolic large ribosomal subunit
x1990904cellular_componentribonucleoprotein complex
y0000027biological_processribosomal large subunit assembly
y0002181biological_processcytoplasmic translation
y0003735molecular_functionstructural constituent of ribosome
y0005737cellular_componentcytoplasm
y0005840cellular_componentribosome
y0006412biological_processtranslation
y0022625cellular_componentcytosolic large ribosomal subunit
y1990904cellular_componentribonucleoprotein complex
z0000027biological_processribosomal large subunit assembly
z0000302biological_processresponse to reactive oxygen species
z0002181biological_processcytoplasmic translation
z0003735molecular_functionstructural constituent of ribosome
z0005515molecular_functionprotein binding
z0005737cellular_componentcytoplasm
z0005829cellular_componentcytosol
z0005840cellular_componentribosome
z0006412biological_processtranslation
z0009314biological_processresponse to radiation
z0022625cellular_componentcytosolic large ribosomal subunit
z1990904cellular_componentribonucleoprotein complex
Functional Information from PROSITE/UniProt
site_idPS00049
Number of Residues27
DetailsRIBOSOMAL_L14 Ribosomal protein L14 signature. AVVVrtkkgvrrp.DGsvirFdgNacVL
ChainResidueDetails
jALA60-LEU86

site_idPS00050
Number of Residues16
DetailsRIBOSOMAL_L23 Ribosomal protein L23 signature. KKAYVTLKegqnldfV
ChainResidueDetails
sLYS81-VAL96

site_idPS00052
Number of Residues27
DetailsRIBOSOMAL_S7 Ribosomal protein S7 signature. SeLlakFVnilmvdGKKstaesIVysA
ChainResidueDetails
GSER20-ALA46

site_idPS00053
Number of Residues18
DetailsRIBOSOMAL_S8 Ribosomal protein S8 signature. GiaVVSTSkGVMtdraAR
ChainResidueDetails
HGLY100-ARG117

site_idPS00054
Number of Residues23
DetailsRIBOSOMAL_S11 Ribosomal protein S11 signature. IrALnaA.GFrItnitDvTPiPHD
ChainResidueDetails
KILE97-ASP119

site_idPS00055
Number of Residues8
DetailsRIBOSOMAL_S12 Ribosomal protein S12 signature. KkPNSAlR
ChainResidueDetails
LLYS43-ARG50

site_idPS00056
Number of Residues13
DetailsRIBOSOMAL_S17 Ribosomal protein S17 signature. GDvVeIrEcRPLS
ChainResidueDetails
QGLY56-SER68

site_idPS00057
Number of Residues24
DetailsRIBOSOMAL_S18 Ribosomal protein S18 signature. IDYkd.IatLknYITEs.GKIvpsRI
ChainResidueDetails
RILE21-ILE44

site_idPS00061
Number of Residues29
DetailsADH_SHORT Short-chain dehydrogenases/reductases family signature. PdhkhavialTsiYGVGKTRSkAILaAAG
ChainResidueDetails
MPRO10-GLY38

site_idPS00323
Number of Residues25
DetailsRIBOSOMAL_S19 Ribosomal protein S19 signature. NGRqhvpvfVtdemVGhkLGEFapT
ChainResidueDetails
SASN53-THR77

site_idPS00358
Number of Residues17
DetailsRIBOSOMAL_L5 Ribosomal protein L5 signature. LaaISGQkpLiTkARkS
ChainResidueDetails
fLEU57-SER73

site_idPS00360
Number of Residues19
DetailsRIBOSOMAL_S9 Ribosomal protein S9 signature. GGGisGQagAirhGiTRAL
ChainResidueDetails
IGLY69-LEU87

site_idPS00361
Number of Residues16
DetailsRIBOSOMAL_S10 Ribosomal protein S10 signature. AkrtGAqvrGPIpLPT
ChainResidueDetails
JALA29-THR44

site_idPS00362
Number of Residues31
DetailsRIBOSOMAL_S15 Ribosomal protein S15 signature. LqgHFaehKkDhhSrrgLlrMvsqrrkLldY
ChainResidueDetails
OLEU39-TYR69

site_idPS00430
Number of Residues66
DetailsTONB_DEPENDENT_REC_1 TonB-dependent receptor (TBDR) proteins signature 1. mireerllkvlraphvsekastameksntivlkvakdatkaeikaavqklfevevevv.........................................................NTLVVKGK
ChainResidueDetails
sMET1-LYS66

site_idPS00467
Number of Residues12
DetailsRIBOSOMAL_L2 Ribosomal protein L2 signature. PtvRGTAmNPvD
ChainResidueDetails
cPRO218-ASP229

site_idPS00474
Number of Residues24
DetailsRIBOSOMAL_L3 Ribosomal protein L3 signature. FadvkkvDvtGtSkGKGfaGtvkR
ChainResidueDetails
dPHE101-ARG124

site_idPS00475
Number of Residues31
DetailsRIBOSOMAL_L15 Ribosomal protein L15 signature. KVILaGeVttp..VtVrglrVTkgAraaIeaaG
ChainResidueDetails
kLYS109-GLY139

site_idPS00525
Number of Residues9
DetailsRIBOSOMAL_L6_1 Ribosomal protein L6 signature 1. PEpYKGKGV
ChainResidueDetails
gPRO154-VAL162

site_idPS00527
Number of Residues23
DetailsRIBOSOMAL_S14 Ribosomal protein S14 signature. R.CrqtgrphgflrkFGLSRiKVR
ChainResidueDetails
NARG63-ARG85

site_idPS00548
Number of Residues35
DetailsRIBOSOMAL_S3 Ribosomal protein S3 signature. ARtewyreGrVplHt..LradIDyntseahTtyGviG
ChainResidueDetails
CALA163-GLY197

site_idPS00579
Number of Residues15
DetailsRIBOSOMAL_L29 Ribosomal protein L29 signature. QSHLLKqVRRDVARV
ChainResidueDetails
xGLN39-VAL53

site_idPS00582
Number of Residues20
DetailsRIBOSOMAL_L33 Ribosomal protein L33 signature. YtTtKNkrtkPekLElkKFD
ChainResidueDetails
0TYR21-ASP40

site_idPS00585
Number of Residues33
DetailsRIBOSOMAL_S5 Ribosomal protein S5 signature. GRifsFtAltVVGDgn.GrVGfGygkar.EVpa.AI
ChainResidueDetails
EGLY28-ILE60

site_idPS00586
Number of Residues12
DetailsRIBOSOMAL_L16_1 Ribosomal protein L16 signature 1. KRqGKIWIRVFP
ChainResidueDetails
lLYS58-PRO69

site_idPS00632
Number of Residues25
DetailsRIBOSOMAL_S4 Ribosomal protein S4 signature. LEgRLdnvVYRmgfGaTraeARqLV
ChainResidueDetails
DLEU94-VAL118

site_idPS00634
Number of Residues33
DetailsRIBOSOMAL_L30 Ribosomal protein L30 signature. TLlgLgLrRigHtVeredtpairgMInaVsfMV
ChainResidueDetails
yTHR23-VAL55

site_idPS00646
Number of Residues14
DetailsRIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGlRHrrGlpVRGQ
ChainResidueDetails
MARG87-GLN100

site_idPS00701
Number of Residues12
DetailsRIBOSOMAL_L16_2 Ribosomal protein L16 signature 2. RMGkGKGnveyW
ChainResidueDetails
lARG81-TRP92

site_idPS00732
Number of Residues10
DetailsRIBOSOMAL_S16 Ribosomal protein S16 signature. VtIRLARHGA
ChainResidueDetails
PVAL2-ALA11

site_idPS00783
Number of Residues23
DetailsRIBOSOMAL_L13 Ribosomal protein L13 signature. VKGMLPkgpl.GRamfrkLkVYaG
ChainResidueDetails
iVAL105-GLY127

site_idPS00784
Number of Residues20
DetailsRIBOSOMAL_L34 Ribosomal protein L34 signature. KRTFQpsvlkRnrsh.GFraR
ChainResidueDetails
1LYS2-ARG21

site_idPS00828
Number of Residues27
DetailsRIBOSOMAL_L36 Ribosomal protein L36 signature. CrnCkiVkRdgvIrViCsaepKHkQrQ
ChainResidueDetails
3CYS11-GLN37

site_idPS00831
Number of Residues15
DetailsRIBOSOMAL_L27 Ribosomal protein L27 signature. GsIIvRQRGtkfhaG
ChainResidueDetails
vGLY34-GLY48

site_idPS00936
Number of Residues27
DetailsRIBOSOMAL_L35 Ribosomal protein L35 signature. KTVrGAaKRFkktgkggfkhkhanl.RH
ChainResidueDetails
2LYS5-HIS31

site_idPS00937
Number of Residues17
DetailsRIBOSOMAL_L20 Ribosomal protein L20 signature. KrqfRqLWIARINaaaR
ChainResidueDetails
pLYS54-ARG70

site_idPS00962
Number of Residues12
DetailsRIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. MrDMLKAGVHFG
ChainResidueDetails
BMET6-GLY17

site_idPS00963
Number of Residues25
DetailsRIBOSOMAL_S2_2 Ribosomal protein S2 signature 2. PdaLFViDadhEhiaIkEannlGIP
ChainResidueDetails
BPRO158-PRO182

site_idPS01015
Number of Residues16
DetailsRIBOSOMAL_L19 Ribosomal protein L19 signature. VkRrGAVR.KAKLYYLR
ChainResidueDetails
oVAL86-ARG101

site_idPS01048
Number of Residues10
DetailsRIBOSOMAL_S6 Ribosomal protein S6 signature. GrRQLAYpIN
ChainResidueDetails
FGLY43-ASN52

site_idPS01108
Number of Residues18
DetailsRIBOSOMAL_L24 Ribosomal protein L24 signature. DDeViVLtGkdKGkr.GkV
ChainResidueDetails
tASP8-VAL25

site_idPS01143
Number of Residues22
DetailsRIBOSOMAL_L31 Ribosomal protein L31 signature. DVcskcHPFFTgkqrdvatg....GR
ChainResidueDetails
4ASP35-ARG56

site_idPS01167
Number of Residues23
DetailsRIBOSOMAL_L17 Ribosomal protein L17 signature. IkTTlpKaKelrrvvEpLITlAK
ChainResidueDetails
mILE34-LYS56

site_idPS01169
Number of Residues23
DetailsRIBOSOMAL_L21 Ribosomal protein L21 signature. VkivKfrrRKhyrkqqGHRQwfT
ChainResidueDetails
qVAL72-THR94

site_idPS01181
Number of Residues13
DetailsRIBOSOMAL_S21 Ribosomal protein S21 signature. DvALRRFKRsceK
ChainResidueDetails
UASP13-LYS25

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsMOD_RES: N6-succinyllysine => ECO:0000269|PubMed:21151122
ChainResidueDetails
BLYS115

site_idSWS_FT_FI2
Number of Residues1
DetailsMOD_RES: N6-acetyllysine => ECO:0000269|PubMed:18723842
ChainResidueDetails
4LYS8

227561

PDB entries from 2024-11-20

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