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8PKO

The ERAD misfolded glycoprotein checkpoint complex from Chaetomium thermophilum (EDEM:PDI heterodimer).

Functional Information from GO Data
ChainGOidnamespacecontents
A0004571molecular_functionmannosyl-oligosaccharide 1,2-alpha-mannosidase activity
A0005509molecular_functioncalcium ion binding
A0005783cellular_componentendoplasmic reticulum
A0005975biological_processcarbohydrate metabolic process
A0006091biological_processgeneration of precursor metabolites and energy
A0006486biological_processprotein glycosylation
A0008218biological_processbioluminescence
A0016020cellular_componentmembrane
A0016787molecular_functionhydrolase activity
A0016798molecular_functionhydrolase activity, acting on glycosyl bonds
A0036503biological_processERAD pathway
A0044322cellular_componentendoplasmic reticulum quality control compartment
A0046872molecular_functionmetal ion binding
A1904380biological_processendoplasmic reticulum mannose trimming
A1904382biological_processmannose trimming involved in glycoprotein ERAD pathway
B0003756molecular_functionprotein disulfide isomerase activity
B0005783cellular_componentendoplasmic reticulum
B0005788cellular_componentendoplasmic reticulum lumen
B0006457biological_processprotein folding
B0010467biological_processgene expression
B0015035molecular_functionprotein-disulfide reductase activity
B0016853molecular_functionisomerase activity
B0034976biological_processresponse to endoplasmic reticulum stress
B0051082molecular_functionunfolded protein binding
Functional Information from PROSITE/UniProt
site_idPS00194
Number of Residues19
DetailsTHIOREDOXIN_1 Thioredoxin family active site. LAeFFapWCGHCKaLapeY
ChainResidueDetails
BLEU42-TYR60
BLEU377-TYR395

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsMOD_RES: (Z)-2,3-didehydrotyrosine => ECO:0000269|PubMed:8448132
ChainResidueDetails
ATYR-117

site_idSWS_FT_FI2
Number of Residues2
DetailsCROSSLNK: 5-imidazolinone (Ser-Gly) => ECO:0000269|PubMed:8448132
ChainResidueDetails
ATHR-118
AGLY-116

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PDB entries from 2025-07-02

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