Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8P7B

CryoEM structure of METTL6 tRNA SerRS complex in a 1:2:2 stoichiometry

Functional Information from GO Data
ChainGOidnamespacecontents
A0005515molecular_functionprotein binding
A0005634cellular_componentnucleus
A0005737cellular_componentcytoplasm
A0006400biological_processtRNA modification
A0008033biological_processtRNA processing
A0008168molecular_functionmethyltransferase activity
A0008173molecular_functionRNA methyltransferase activity
A0008757molecular_functionS-adenosylmethionine-dependent methyltransferase activity
A0019899molecular_functionenzyme binding
A0030488biological_processtRNA methylation
A0032259biological_processmethylation
A0052735molecular_functiontRNA (cytidine-3-)-methyltransferase activity
B0000049molecular_functiontRNA binding
B0000122biological_processnegative regulation of transcription by RNA polymerase II
B0000978molecular_functionRNA polymerase II cis-regulatory region sequence-specific DNA binding
B0001514biological_processselenocysteine incorporation
B0002181biological_processcytoplasmic translation
B0003677molecular_functionDNA binding
B0004812molecular_functionaminoacyl-tRNA ligase activity
B0004828molecular_functionserine-tRNA ligase activity
B0005515molecular_functionprotein binding
B0005524molecular_functionATP binding
B0005634cellular_componentnucleus
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0006400biological_processtRNA modification
B0006412biological_processtranslation
B0006434biological_processseryl-tRNA aminoacylation
B0016525biological_processnegative regulation of angiogenesis
B0019899molecular_functionenzyme binding
B0042803molecular_functionprotein homodimerization activity
B0060090molecular_functionmolecular adaptor activity
B0070062cellular_componentextracellular exosome
B0098619molecular_functionselenocysteine-tRNA ligase activity
B1904046biological_processnegative regulation of vascular endothelial growth factor production
D0000049molecular_functiontRNA binding
D0000122biological_processnegative regulation of transcription by RNA polymerase II
D0000978molecular_functionRNA polymerase II cis-regulatory region sequence-specific DNA binding
D0001514biological_processselenocysteine incorporation
D0002181biological_processcytoplasmic translation
D0003677molecular_functionDNA binding
D0004812molecular_functionaminoacyl-tRNA ligase activity
D0004828molecular_functionserine-tRNA ligase activity
D0005515molecular_functionprotein binding
D0005524molecular_functionATP binding
D0005634cellular_componentnucleus
D0005737cellular_componentcytoplasm
D0005829cellular_componentcytosol
D0006400biological_processtRNA modification
D0006412biological_processtranslation
D0006434biological_processseryl-tRNA aminoacylation
D0016525biological_processnegative regulation of angiogenesis
D0019899molecular_functionenzyme binding
D0042803molecular_functionprotein homodimerization activity
D0060090molecular_functionmolecular adaptor activity
D0070062cellular_componentextracellular exosome
D0098619molecular_functionselenocysteine-tRNA ligase activity
D1904046biological_processnegative regulation of vascular endothelial growth factor production
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues7
DetailsBINDING: BINDING => ECO:0000269|PubMed:34922197, ECO:0007744|PDB:7F1E
ChainResidueDetails
ATRP45
ATYR49
AGLY87
AASP110
AASP136
ALEU137
AILE157
DASN427

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:34862464, ECO:0007744|PDB:7EZG
ChainResidueDetails
AHIS61
AGLU85
DVAL318
DGLU391

site_idSWS_FT_FI3
Number of Residues2
DetailsSITE: Important for serine binding => ECO:0000269|PubMed:28236339
ChainResidueDetails
BTHR429
DTHR429

site_idSWS_FT_FI4
Number of Residues2
DetailsMOD_RES: N-acetylmethionine => ECO:0007744|PubMed:19413330
ChainResidueDetails
BMET1
DMET1

site_idSWS_FT_FI5
Number of Residues2
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:17525332
ChainResidueDetails
BSER241
DSER241

site_idSWS_FT_FI6
Number of Residues2
DetailsMOD_RES: N6-acetyllysine => ECO:0007744|PubMed:19608861
ChainResidueDetails
BLYS323
DLYS323

224572

PDB entries from 2024-09-04

PDB statisticsPDBj update infoContact PDBjnumon