| Chain | GOid | namespace | contents |
| A | 0000045 | biological_process | autophagosome assembly |
| A | 0000082 | biological_process | G1/S transition of mitotic cell cycle |
| A | 0005515 | molecular_function | protein binding |
| A | 0005634 | cellular_component | nucleus |
| A | 0005654 | cellular_component | nucleoplasm |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0005829 | cellular_component | cytosol |
| A | 0005886 | cellular_component | plasma membrane |
| A | 0006511 | biological_process | ubiquitin-dependent protein catabolic process |
| A | 0006513 | biological_process | protein monoubiquitination |
| A | 0006915 | biological_process | apoptotic process |
| A | 0007040 | biological_process | lysosome organization |
| A | 0008283 | biological_process | cell population proliferation |
| A | 0009887 | biological_process | animal organ morphogenesis |
| A | 0010507 | biological_process | negative regulation of autophagy |
| A | 0010508 | biological_process | positive regulation of autophagy |
| A | 0016567 | biological_process | protein ubiquitination |
| A | 0019005 | cellular_component | SCF ubiquitin ligase complex |
| A | 0030674 | molecular_function | protein-macromolecule adaptor activity |
| A | 0031146 | biological_process | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process |
| A | 0031461 | cellular_component | cullin-RING ubiquitin ligase complex |
| A | 0031625 | molecular_function | ubiquitin protein ligase binding |
| A | 0031669 | biological_process | cellular response to nutrient levels |
| A | 0034599 | biological_process | cellular response to oxidative stress |
| A | 0038202 | biological_process | TORC1 signaling |
| A | 0043123 | biological_process | positive regulation of canonical NF-kappaB signal transduction |
| A | 0043124 | biological_process | negative regulation of canonical NF-kappaB signal transduction |
| A | 0043161 | biological_process | proteasome-mediated ubiquitin-dependent protein catabolic process |
| A | 0070936 | biological_process | protein K48-linked ubiquitination |
| A | 0097193 | biological_process | intrinsic apoptotic signaling pathway |
| A | 0140374 | biological_process | antiviral innate immune response |
| A | 0160072 | molecular_function | ubiquitin ligase complex scaffold activity |
| A | 1904037 | biological_process | positive regulation of epithelial cell apoptotic process |
| A | 1904262 | biological_process | negative regulation of TORC1 signaling |
| A | 1990452 | cellular_component | Parkin-FBXW7-Cul1 ubiquitin ligase complex |
| B | 0000045 | biological_process | autophagosome assembly |
| B | 0000082 | biological_process | G1/S transition of mitotic cell cycle |
| B | 0000165 | biological_process | MAPK cascade |
| B | 0000209 | biological_process | protein polyubiquitination |
| B | 0000423 | biological_process | mitophagy |
| B | 0001837 | biological_process | epithelial to mesenchymal transition |
| B | 0004842 | molecular_function | ubiquitin-protein transferase activity |
| B | 0005515 | molecular_function | protein binding |
| B | 0005634 | cellular_component | nucleus |
| B | 0005654 | cellular_component | nucleoplasm |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0005829 | cellular_component | cytosol |
| B | 0006281 | biological_process | DNA repair |
| B | 0006283 | biological_process | transcription-coupled nucleotide-excision repair |
| B | 0006366 | biological_process | transcription by RNA polymerase II |
| B | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| B | 0006511 | biological_process | ubiquitin-dependent protein catabolic process |
| B | 0006513 | biological_process | protein monoubiquitination |
| B | 0006915 | biological_process | apoptotic process |
| B | 0006974 | biological_process | DNA damage response |
| B | 0006979 | biological_process | response to oxidative stress |
| B | 0007040 | biological_process | lysosome organization |
| B | 0007283 | biological_process | spermatogenesis |
| B | 0007346 | biological_process | regulation of mitotic cell cycle |
| B | 0008270 | molecular_function | zinc ion binding |
| B | 0008286 | biological_process | insulin receptor signaling pathway |
| B | 0010507 | biological_process | negative regulation of autophagy |
| B | 0010508 | biological_process | positive regulation of autophagy |
| B | 0016567 | biological_process | protein ubiquitination |
| B | 0016740 | molecular_function | transferase activity |
| B | 0019005 | cellular_component | SCF ubiquitin ligase complex |
| B | 0019221 | biological_process | cytokine-mediated signaling pathway |
| B | 0019788 | molecular_function | NEDD8 transferase activity |
| B | 0030163 | biological_process | protein catabolic process |
| B | 0030330 | biological_process | DNA damage response, signal transduction by p53 class mediator |
| B | 0030891 | cellular_component | VCB complex |
| B | 0031146 | biological_process | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process |
| B | 0031461 | cellular_component | cullin-RING ubiquitin ligase complex |
| B | 0031462 | cellular_component | Cul2-RING ubiquitin ligase complex |
| B | 0031463 | cellular_component | Cul3-RING ubiquitin ligase complex |
| B | 0031464 | cellular_component | Cul4A-RING E3 ubiquitin ligase complex |
| B | 0031465 | cellular_component | Cul4B-RING E3 ubiquitin ligase complex |
| B | 0031466 | cellular_component | Cul5-RING ubiquitin ligase complex |
| B | 0031467 | cellular_component | Cul7-RING ubiquitin ligase complex |
| B | 0031625 | molecular_function | ubiquitin protein ligase binding |
| B | 0031669 | biological_process | cellular response to nutrient levels |
| B | 0032435 | biological_process | negative regulation of proteasomal ubiquitin-dependent protein catabolic process |
| B | 0032436 | biological_process | positive regulation of proteasomal ubiquitin-dependent protein catabolic process |
| B | 0032480 | biological_process | negative regulation of type I interferon production |
| B | 0032481 | biological_process | positive regulation of type I interferon production |
| B | 0032869 | biological_process | cellular response to insulin stimulus |
| B | 0034198 | biological_process | cellular response to amino acid starvation |
| B | 0034450 | molecular_function | ubiquitin-ubiquitin ligase activity |
| B | 0034599 | biological_process | cellular response to oxidative stress |
| B | 0034644 | biological_process | cellular response to UV |
| B | 0035279 | biological_process | miRNA-mediated gene silencing by mRNA destabilization |
| B | 0038066 | biological_process | p38MAPK cascade |
| B | 0038202 | biological_process | TORC1 signaling |
| B | 0042110 | biological_process | T cell activation |
| B | 0042770 | biological_process | signal transduction in response to DNA damage |
| B | 0043123 | biological_process | positive regulation of canonical NF-kappaB signal transduction |
| B | 0043124 | biological_process | negative regulation of canonical NF-kappaB signal transduction |
| B | 0043161 | biological_process | proteasome-mediated ubiquitin-dependent protein catabolic process |
| B | 0043687 | biological_process | post-translational protein modification |
| B | 0044877 | molecular_function | protein-containing complex binding |
| B | 0045116 | biological_process | protein neddylation |
| B | 0045727 | biological_process | positive regulation of translation |
| B | 0045732 | biological_process | positive regulation of protein catabolic process |
| B | 0045944 | biological_process | positive regulation of transcription by RNA polymerase II |
| B | 0046627 | biological_process | negative regulation of insulin receptor signaling pathway |
| B | 0046872 | molecular_function | metal ion binding |
| B | 0060090 | molecular_function | molecular adaptor activity |
| B | 0060337 | biological_process | type I interferon-mediated signaling pathway |
| B | 0061629 | molecular_function | RNA polymerase II-specific DNA-binding transcription factor binding |
| B | 0061630 | molecular_function | ubiquitin protein ligase activity |
| B | 0061663 | molecular_function | NEDD8 ligase activity |
| B | 0062197 | biological_process | cellular response to chemical stress |
| B | 0070294 | biological_process | renal sodium ion absorption |
| B | 0070936 | biological_process | protein K48-linked ubiquitination |
| B | 0071230 | biological_process | cellular response to amino acid stimulus |
| B | 0080008 | cellular_component | Cul4-RING E3 ubiquitin ligase complex |
| B | 0090090 | biological_process | negative regulation of canonical Wnt signaling pathway |
| B | 0090734 | cellular_component | site of DNA damage |
| B | 0097510 | biological_process | base-excision repair, AP site formation via deaminated base removal |
| B | 0097602 | molecular_function | cullin family protein binding |
| B | 0140627 | biological_process | ubiquitin-dependent protein catabolic process via the C-end degron rule pathway |
| B | 0160240 | biological_process | RNA polymerase II transcription initiation surveillance |
| B | 1900076 | biological_process | regulation of cellular response to insulin stimulus |
| B | 1901525 | biological_process | negative regulation of mitophagy |
| B | 1901797 | biological_process | negative regulation of signal transduction by p53 class mediator |
| B | 1902499 | biological_process | positive regulation of protein autoubiquitination |
| B | 1902883 | biological_process | negative regulation of response to oxidative stress |
| B | 1904037 | biological_process | positive regulation of epithelial cell apoptotic process |
| B | 1904262 | biological_process | negative regulation of TORC1 signaling |
| B | 1904263 | biological_process | positive regulation of TORC1 signaling |
| B | 2000059 | biological_process | negative regulation of ubiquitin-dependent protein catabolic process |
| C | 0000151 | cellular_component | ubiquitin ligase complex |
| C | 0005515 | molecular_function | protein binding |
| C | 0005576 | cellular_component | extracellular region |
| C | 0005634 | cellular_component | nucleus |
| C | 0005654 | cellular_component | nucleoplasm |
| C | 0005737 | cellular_component | cytoplasm |
| C | 0005794 | cellular_component | Golgi apparatus |
| C | 0005829 | cellular_component | cytosol |
| C | 0010265 | biological_process | SCF complex assembly |
| C | 0016020 | cellular_component | membrane |
| C | 0016567 | biological_process | protein ubiquitination |
| C | 0017025 | molecular_function | TBP-class protein binding |
| C | 0030154 | biological_process | cell differentiation |
| C | 0031461 | cellular_component | cullin-RING ubiquitin ligase complex |
| C | 0034774 | cellular_component | secretory granule lumen |
| C | 0043086 | biological_process | negative regulation of catalytic activity |
| C | 0045893 | biological_process | positive regulation of DNA-templated transcription |
| C | 0045899 | biological_process | positive regulation of RNA polymerase II transcription preinitiation complex assembly |
| C | 0070062 | cellular_component | extracellular exosome |
| C | 1904813 | cellular_component | ficolin-1-rich granule lumen |
| F | 0000151 | cellular_component | ubiquitin ligase complex |
| F | 0005515 | molecular_function | protein binding |
| F | 0005634 | cellular_component | nucleus |
| F | 0005654 | cellular_component | nucleoplasm |
| F | 0005737 | cellular_component | cytoplasm |
| F | 0005829 | cellular_component | cytosol |
| F | 0031396 | biological_process | regulation of protein ubiquitination |
| F | 0031624 | molecular_function | ubiquitin conjugating enzyme binding |
| F | 0032182 | molecular_function | ubiquitin-like protein binding |
| F | 0045116 | biological_process | protein neddylation |
| F | 0097602 | molecular_function | cullin family protein binding |
| F | 2000434 | biological_process | regulation of protein neddylation |
| F | 2000436 | biological_process | positive regulation of protein neddylation |
