Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

8JIV

Atomic structure of wheat ribosome reveals unique features of the plant ribosomes

This is a non-PDB format compatible entry.

Functional Information from GO Data

Chain	GOid	namespace	contents
Ca	0003735	molecular_function	structural constituent of ribosome
Ca	0005840	cellular_component	ribosome
Ca	0006412	biological_process	translation
Ca	0015934	cellular_component	large ribosomal subunit
Ca	0022625	cellular_component	cytosolic large ribosomal subunit
Ca	1990904	cellular_component	ribonucleoprotein complex
CA	0002181	biological_process	cytoplasmic translation
CA	0003723	molecular_function	RNA binding
CA	0003735	molecular_function	structural constituent of ribosome
CA	0005840	cellular_component	ribosome
CA	0006412	biological_process	translation
CA	0015934	cellular_component	large ribosomal subunit
CA	0022625	cellular_component	cytosolic large ribosomal subunit
CA	0046872	molecular_function	metal ion binding
CA	1990904	cellular_component	ribonucleoprotein complex
Cb	0002181	biological_process	cytoplasmic translation
Cb	0003735	molecular_function	structural constituent of ribosome
Cb	0005840	cellular_component	ribosome
Cb	0006412	biological_process	translation
Cb	0022625	cellular_component	cytosolic large ribosomal subunit
Cb	0046872	molecular_function	metal ion binding
Cb	1990904	cellular_component	ribonucleoprotein complex
CB	0003723	molecular_function	RNA binding
CB	0003735	molecular_function	structural constituent of ribosome
CB	0005840	cellular_component	ribosome
CB	0006412	biological_process	translation
CB	0022625	cellular_component	cytosolic large ribosomal subunit
CB	0046872	molecular_function	metal ion binding
CB	1990904	cellular_component	ribonucleoprotein complex
Cc	0003723	molecular_function	RNA binding
Cc	0003735	molecular_function	structural constituent of ribosome
Cc	0005840	cellular_component	ribosome
Cc	0022625	cellular_component	cytosolic large ribosomal subunit
Cc	1990904	cellular_component	ribonucleoprotein complex
CC	0003735	molecular_function	structural constituent of ribosome
CC	0005840	cellular_component	ribosome
CC	0006412	biological_process	translation
Cd	0002181	biological_process	cytoplasmic translation
Cd	0003735	molecular_function	structural constituent of ribosome
Cd	0005840	cellular_component	ribosome
Cd	0006412	biological_process	translation
Cd	0022625	cellular_component	cytosolic large ribosomal subunit
Cd	1990904	cellular_component	ribonucleoprotein complex
CD	0000027	biological_process	ribosomal large subunit assembly
CD	0003735	molecular_function	structural constituent of ribosome
CD	0005737	cellular_component	cytoplasm
CD	0005840	cellular_component	ribosome
CD	0006412	biological_process	translation
CD	0008097	molecular_function	5S rRNA binding
CD	0009955	biological_process	adaxial/abaxial pattern specification
CD	0009965	biological_process	leaf morphogenesis
CD	0022625	cellular_component	cytosolic large ribosomal subunit
CD	0022626	cellular_component	cytosolic ribosome
CD	0051301	biological_process	cell division
CD	1990904	cellular_component	ribonucleoprotein complex
Ce	0003735	molecular_function	structural constituent of ribosome
Ce	0005840	cellular_component	ribosome
Ce	0006412	biological_process	translation
Ce	0022625	cellular_component	cytosolic large ribosomal subunit
Ce	0046872	molecular_function	metal ion binding
Ce	1990904	cellular_component	ribonucleoprotein complex
CE	0003735	molecular_function	structural constituent of ribosome
CE	0005840	cellular_component	ribosome
CE	0006412	biological_process	translation
CE	1990904	cellular_component	ribonucleoprotein complex
Cf	0003735	molecular_function	structural constituent of ribosome
Cf	0005840	cellular_component	ribosome
Cf	0006412	biological_process	translation
CF	0000463	biological_process	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
CF	0003723	molecular_function	RNA binding
CF	0003735	molecular_function	structural constituent of ribosome
CF	0005840	cellular_component	ribosome
CF	0022625	cellular_component	cytosolic large ribosomal subunit
CF	1990904	cellular_component	ribonucleoprotein complex
Cg	0003735	molecular_function	structural constituent of ribosome
Cg	0005840	cellular_component	ribosome
Cg	0006412	biological_process	translation
Cg	0022625	cellular_component	cytosolic large ribosomal subunit
Cg	0042254	biological_process	ribosome biogenesis
Cg	0046872	molecular_function	metal ion binding
Cg	1990904	cellular_component	ribonucleoprotein complex
CG	0000470	biological_process	maturation of LSU-rRNA
CG	0003723	molecular_function	RNA binding
CG	0005840	cellular_component	ribosome
CG	0022625	cellular_component	cytosolic large ribosomal subunit
CG	0042254	biological_process	ribosome biogenesis
CG	1990904	cellular_component	ribonucleoprotein complex
Ch	0000463	biological_process	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Ch	0003729	molecular_function	mRNA binding
Ch	0003735	molecular_function	structural constituent of ribosome
Ch	0005840	cellular_component	ribosome
Ch	0006412	biological_process	translation
Ch	0022625	cellular_component	cytosolic large ribosomal subunit
Ch	1990904	cellular_component	ribonucleoprotein complex
CH	0003735	molecular_function	structural constituent of ribosome
CH	0005840	cellular_component	ribosome
CH	0006412	biological_process	translation
CH	0019843	molecular_function	rRNA binding
CH	1990904	cellular_component	ribonucleoprotein complex
Ci	0002181	biological_process	cytoplasmic translation
Ci	0003735	molecular_function	structural constituent of ribosome
Ci	0005840	cellular_component	ribosome
Ci	0006412	biological_process	translation
Ci	0022625	cellular_component	cytosolic large ribosomal subunit
Ci	1990904	cellular_component	ribonucleoprotein complex
CI	0003735	molecular_function	structural constituent of ribosome
CI	0005840	cellular_component	ribosome
CI	0006412	biological_process	translation
CI	0010224	biological_process	response to UV-B
CI	0022625	cellular_component	cytosolic large ribosomal subunit
CI	0046872	molecular_function	metal ion binding
CI	1990904	cellular_component	ribonucleoprotein complex
Cj	0003723	molecular_function	RNA binding
Cj	0003735	molecular_function	structural constituent of ribosome
Cj	0005840	cellular_component	ribosome
Cj	0006412	biological_process	translation
Cj	0008270	molecular_function	zinc ion binding
Cj	0019843	molecular_function	rRNA binding
Cj	0022625	cellular_component	cytosolic large ribosomal subunit
Cj	0046872	molecular_function	metal ion binding
Cj	1990904	cellular_component	ribonucleoprotein complex
CJ	0003723	molecular_function	RNA binding
CJ	0003735	molecular_function	structural constituent of ribosome
CJ	0005840	cellular_component	ribosome
CJ	0006412	biological_process	translation
CJ	0022625	cellular_component	cytosolic large ribosomal subunit
CJ	1990904	cellular_component	ribonucleoprotein complex
Ck	0003735	molecular_function	structural constituent of ribosome
Ck	0005840	cellular_component	ribosome
Ck	0006412	biological_process	translation
Ck	0022618	biological_process	protein-RNA complex assembly
Ck	0022625	cellular_component	cytosolic large ribosomal subunit
Ck	1990904	cellular_component	ribonucleoprotein complex
Cl	0002181	biological_process	cytoplasmic translation
Cl	0003735	molecular_function	structural constituent of ribosome
Cl	0005840	cellular_component	ribosome
Cl	0006412	biological_process	translation
Cl	0022625	cellular_component	cytosolic large ribosomal subunit
Cl	1990904	cellular_component	ribonucleoprotein complex
CL	0003723	molecular_function	RNA binding
CL	0003735	molecular_function	structural constituent of ribosome
CL	0005840	cellular_component	ribosome
CL	0006412	biological_process	translation
CL	0022625	cellular_component	cytosolic large ribosomal subunit
CL	1990904	cellular_component	ribonucleoprotein complex
Cm	0003729	molecular_function	mRNA binding
Cm	0003735	molecular_function	structural constituent of ribosome
Cm	0005634	cellular_component	nucleus
Cm	0005737	cellular_component	cytoplasm
Cm	0005840	cellular_component	ribosome
Cm	0006412	biological_process	translation
Cm	0046872	molecular_function	metal ion binding
Cm	1990904	cellular_component	ribonucleoprotein complex
CM	0003723	molecular_function	RNA binding
CM	0003729	molecular_function	mRNA binding
CM	0003735	molecular_function	structural constituent of ribosome
CM	0005840	cellular_component	ribosome
CM	0006412	biological_process	translation
CM	0022625	cellular_component	cytosolic large ribosomal subunit
CM	0042273	biological_process	ribosomal large subunit biogenesis
CM	1990904	cellular_component	ribonucleoprotein complex
CN	0002181	biological_process	cytoplasmic translation
CN	0003723	molecular_function	RNA binding
CN	0003735	molecular_function	structural constituent of ribosome
CN	0005840	cellular_component	ribosome
CN	0006412	biological_process	translation
CN	0022625	cellular_component	cytosolic large ribosomal subunit
CN	0046872	molecular_function	metal ion binding
CN	1990904	cellular_component	ribonucleoprotein complex
Co	0003735	molecular_function	structural constituent of ribosome
Co	0005840	cellular_component	ribosome
Co	0006412	biological_process	translation
CO	0003729	molecular_function	mRNA binding
CO	0003735	molecular_function	structural constituent of ribosome
CO	0005840	cellular_component	ribosome
CO	0006412	biological_process	translation
CO	0015934	cellular_component	large ribosomal subunit
CO	0017148	biological_process	negative regulation of translation
CO	0022625	cellular_component	cytosolic large ribosomal subunit
CO	1990904	cellular_component	ribonucleoprotein complex
Cp	0003735	molecular_function	structural constituent of ribosome
Cp	0005840	cellular_component	ribosome
Cp	0006412	biological_process	translation
Cp	0008270	molecular_function	zinc ion binding
Cp	0046872	molecular_function	metal ion binding
Cp	1990904	cellular_component	ribonucleoprotein complex
CP	0002181	biological_process	cytoplasmic translation
CP	0003735	molecular_function	structural constituent of ribosome
CP	0005840	cellular_component	ribosome
CP	0006412	biological_process	translation
CP	0015934	cellular_component	large ribosomal subunit
CP	0022625	cellular_component	cytosolic large ribosomal subunit
CP	0046872	molecular_function	metal ion binding
CP	1990904	cellular_component	ribonucleoprotein complex
CQ	0003723	molecular_function	RNA binding
CQ	0003735	molecular_function	structural constituent of ribosome
CQ	0005840	cellular_component	ribosome
CQ	0006412	biological_process	translation
CQ	0022625	cellular_component	cytosolic large ribosomal subunit
CQ	1990904	cellular_component	ribonucleoprotein complex
Cr	0003735	molecular_function	structural constituent of ribosome
Cr	0005840	cellular_component	ribosome
Cr	0006412	biological_process	translation
CR	0003723	molecular_function	RNA binding
CR	0003735	molecular_function	structural constituent of ribosome
CR	0005840	cellular_component	ribosome
CR	0006412	biological_process	translation
CR	0022625	cellular_component	cytosolic large ribosomal subunit
CR	0046872	molecular_function	metal ion binding
CR	1990904	cellular_component	ribonucleoprotein complex
CS	0002181	biological_process	cytoplasmic translation
CS	0003735	molecular_function	structural constituent of ribosome
CS	0005840	cellular_component	ribosome
CS	0006412	biological_process	translation
CS	0022625	cellular_component	cytosolic large ribosomal subunit
CS	1990904	cellular_component	ribonucleoprotein complex
CT	0003735	molecular_function	structural constituent of ribosome
CT	0005840	cellular_component	ribosome
CT	0006412	biological_process	translation
CT	0046872	molecular_function	metal ion binding
CT	1990904	cellular_component	ribonucleoprotein complex
CU	0002181	biological_process	cytoplasmic translation
CU	0003723	molecular_function	RNA binding
CU	0003735	molecular_function	structural constituent of ribosome
CU	0005840	cellular_component	ribosome
CU	0006412	biological_process	translation
CU	1990904	cellular_component	ribonucleoprotein complex
CV	0003735	molecular_function	structural constituent of ribosome
CV	0005840	cellular_component	ribosome
CV	0006412	biological_process	translation
CV	0022625	cellular_component	cytosolic large ribosomal subunit
CV	0046872	molecular_function	metal ion binding
CV	0070180	molecular_function	large ribosomal subunit rRNA binding
CV	1990904	cellular_component	ribonucleoprotein complex
CW	0002181	biological_process	cytoplasmic translation
CW	0003729	molecular_function	mRNA binding
CW	0003735	molecular_function	structural constituent of ribosome
CW	0005840	cellular_component	ribosome
CW	0022625	cellular_component	cytosolic large ribosomal subunit
CW	1990904	cellular_component	ribonucleoprotein complex
CX	0003723	molecular_function	RNA binding
CX	0003735	molecular_function	structural constituent of ribosome
CX	0005840	cellular_component	ribosome
CX	0006412	biological_process	translation
CX	0009644	biological_process	response to high light intensity
CX	0019843	molecular_function	rRNA binding
CX	1990904	cellular_component	ribonucleoprotein complex
CY	0003723	molecular_function	RNA binding
CY	0003735	molecular_function	structural constituent of ribosome
CY	0005840	cellular_component	ribosome
CY	0006412	biological_process	translation
CY	0015934	cellular_component	large ribosomal subunit
CZ	0003735	molecular_function	structural constituent of ribosome
CZ	0005840	cellular_component	ribosome
CZ	0006412	biological_process	translation
CZ	0022625	cellular_component	cytosolic large ribosomal subunit
CZ	1990904	cellular_component	ribonucleoprotein complex

Functional Information from PROSITE/UniProt

site_id	PS00049
Number of Residues	27
Details	RIBOSOMAL_L14 Ribosomal protein L14 signature. AVIVrqrkpwrrk.DGvfmyFedNagVI

Chain	Residue	Details
CV	ALA79-ILE105

site_id	PS00050
Number of Residues	16
Details	RIBOSOMAL_L23 Ribosomal protein L23 signature. KKAYVKLTpdydaldV

Chain	Residue	Details
CX	LYS130-VAL145

site_id	PS00051
Number of Residues	17
Details	RIBOSOMAL_L39E Ribosomal protein L39e signature. RTdntIryNakrRHWRR

Chain	Residue	Details
Cl	ARG30-ARG46

site_id	PS00299
Number of Residues	26
Details	UBIQUITIN_1 Ubiquitin domain signature. KakIqDkegIPpdqQrLIFaGkqleD

Chain	Residue	Details
Cm	LYS-49-ASP-24

site_id	PS00358
Number of Residues	17
Details	RIBOSOMAL_L5 Ribosomal protein L5 signature. LeqLSGQspVfSkARyT

Chain	Residue	Details
CJ	LEU39-THR55

site_id	PS00464
Number of Residues	25
Details	RIBOSOMAL_L22 Ribosomal protein L22 signature. RrrTyRAhGRinpymsnpCHIELiL

Chain	Residue	Details
CP	ARG127-LEU151

site_id	PS00467
Number of Residues	12
Details	RIBOSOMAL_L2 Ribosomal protein L2 signature. PkvRGVAmNPvE

Chain	Residue	Details
CA	PRO197-GLU208

site_id	PS00474
Number of Residues	24
Details	RIBOSOMAL_L3 Ribosomal protein L3 signature. FqkdemvDiiGvTkGKGyeGvvtR

Chain	Residue	Details
CB	PHE212-ARG235

site_id	PS00475
Number of Residues	32
Details	RIBOSOMAL_L15 Ribosomal protein L15 signature. KVLGkGmLpekp.IvVkaklISkiAekkIkaaG

Chain	Residue	Details
Ca	LYS107-GLY138

site_id	PS00526
Number of Residues	20
Details	RIBOSOMAL_L19E Ribosomal protein L19e signature. QKRLaSsvlkCGkgkVWLDP

Chain	Residue	Details
CR	GLN7-PRO26

site_id	PS00634
Number of Residues	33
Details	RIBOSOMAL_L30 Ribosomal protein L30 signature. ILqlLrLrQifNgVflkvnkatinMLrrVepYV

Chain	Residue	Details
CF	ILE104-VAL136

site_id	PS00700
Number of Residues	22
Details	RIBOSOMAL_L6_2 Ribosomal protein L6 signature 2. QkchVknKdiRkFlDGIYVsdK

Chain	Residue	Details
CH	GLN162-LYS183

site_id	PS00709
Number of Residues	25
Details	RIBOSOMAL_L30E_1 Ribosomal protein L30e signature 1. SgkytlGyKtvLKtlRsSkgKlIIL

Chain	Residue	Details
Cc	SER24-LEU48

site_id	PS00783
Number of Residues	24
Details	RIBOSOMAL_L13 Ribosomal protein L13 signature. IRGMIPhktarGEaalarLkAYeG

Chain	Residue	Details
CO	ILE89-GLY112

site_id	PS00939
Number of Residues	27
Details	RIBOSOMAL_L1E Ribosomal protein L1e signature. NvhlRrvAVaSALaATSvpslvlaRGH

Chain	Residue	Details
CC	ASN120-HIS146

site_id	PS00993
Number of Residues	21
Details	RIBOSOMAL_L30E_2 Ribosomal protein L30e signature 2. DLGTacGKyyrvccLsIlDpG

Chain	Residue	Details
Cc	ASP80-GLY100

site_id	PS01073
Number of Residues	18
Details	RIBOSOMAL_L24E Ribosomal protein L24e signature. FsGqkIyPGkGirFiRsD

Chain	Residue	Details
CW	PHE10-ASP27

site_id	PS01077
Number of Residues	20
Details	RIBOSOMAL_L37E Ribosomal protein L37e signature. GTgSfGkRrnkt.HtlCiRCG

Chain	Residue	Details
Cj	GLY4-GLY23

site_id	PS01082
Number of Residues	18
Details	RIBOSOMAL_L7AE Ribosomal protein L7Ae signature. CrkmeVPYciVkGKsrLG

Chain	Residue	Details
CG	CYS166-GLY183

site_id	PS01104
Number of Residues	15
Details	RIBOSOMAL_L13E Ribosomal protein L13e signature. RaGRGFTLeELksaG

Chain	Residue	Details
CL	ARG70-GLY84

site_id	PS01105
Number of Residues	22
Details	RIBOSOMAL_L35AE Ribosomal protein L35Ae signature. GKVtRpHGnsGvVrAkFrsnLP

Chain	Residue	Details
Cf	GLY73-PRO94

site_id	PS01106
Number of Residues	18
Details	RIBOSOMAL_L18E Ribosomal protein L18e signature. KrLfmSKtnRPpLSMrRL

Chain	Residue	Details
CQ	LYS50-LEU67

site_id	PS01107
Number of Residues	12
Details	RIBOSOMAL_L27E Ribosomal protein L27e signature. GKNrWFFtkLRF

Chain	Residue	Details
CZ	GLY125-PHE136

site_id	PS01108
Number of Residues	18
Details	RIBOSOMAL_L24 Ribosomal protein L24 signature. DDeVqVVrGtyKGre.GkV

Chain	Residue	Details
CY	ASP52-VAL69

site_id	PS01145
Number of Residues	14
Details	RIBOSOMAL_L34E Ribosomal protein L34e signature. TkSnQtrvvKTPGG

Chain	Residue	Details
Cg	THR15-GLY28

site_id	PS01170
Number of Residues	19
Details	RIBOSOMAL_L6E Ribosomal protein L6e signature. NgvPIRRvnqaYVIATSt.K

Chain	Residue	Details
CE	ASN113-LYS131

site_id	PS01171
Number of Residues	26
Details	RIBOSOMAL_L21E Ribosomal protein L21e signature. GEhVdvkvngavhk.GmpHkfYhGrTG

Chain	Residue	Details
CT	GLY37-GLY62

site_id	PS01172
Number of Residues	12
Details	RIBOSOMAL_L44E Ribosomal protein L44e signature. KtTKKivLKlqC

Chain	Residue	Details
Co	LYS63-CYS74

site_id	PS01190
Number of Residues	11
Details	RIBOSOMAL_L36E Ribosomal protein L36e signature. PYEKRiTELLK

Chain	Residue	Details
Ci	PRO55-LYS65

site_id	PS01194
Number of Residues	24
Details	RIBOSOMAL_L15E Ribosomal protein L15e signature. DRARrLGFkAkqGYVVYRiRVrRG

Chain	Residue	Details
CN	ASP46-GLY69

site_id	PS01257
Number of Residues	22
Details	RIBOSOMAL_L10E Ribosomal protein L10e signature. ADRlqtGMRgAFGKPlGtcARV

Chain	Residue	Details
CI	ALA108-VAL129

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		Validation report (PDF)