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8IFN

MERS-CoV spike trimer in complex with nanobody VHH-T148

Functional Information from GO Data
ChainGOidnamespacecontents
B0016020cellular_componentmembrane
B0019031cellular_componentviral envelope
B0019064biological_processfusion of virus membrane with host plasma membrane
B0039654biological_processfusion of virus membrane with host endosome membrane
B0046813biological_processreceptor-mediated virion attachment to host cell
B0055036cellular_componentvirion membrane
B0075509biological_processendocytosis involved in viral entry into host cell
C0016020cellular_componentmembrane
C0019031cellular_componentviral envelope
C0019064biological_processfusion of virus membrane with host plasma membrane
C0039654biological_processfusion of virus membrane with host endosome membrane
C0046813biological_processreceptor-mediated virion attachment to host cell
C0055036cellular_componentvirion membrane
C0075509biological_processendocytosis involved in viral entry into host cell
E0016020cellular_componentmembrane
E0019031cellular_componentviral envelope
E0019064biological_processfusion of virus membrane with host plasma membrane
E0039654biological_processfusion of virus membrane with host endosome membrane
E0046813biological_processreceptor-mediated virion attachment to host cell
E0055036cellular_componentvirion membrane
E0075509biological_processendocytosis involved in viral entry into host cell
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues60
DetailsTRANSMEM: Helical => ECO:0000255|HAMAP-Rule:MF_04099
ChainResidueDetails
BGLY1306-VAL1326
CGLY1306-VAL1326
EGLY1306-VAL1326

site_idSWS_FT_FI2
Number of Residues3
DetailsSITE: Cleavage; by host => ECO:0000250
ChainResidueDetails
BGLY751
CGLY751
EGLY751

site_idSWS_FT_FI3
Number of Residues3
DetailsSITE: Cleavage => ECO:0000255|HAMAP-Rule:MF_04099
ChainResidueDetails
BARG887
CARG887
EARG887

site_idSWS_FT_FI4
Number of Residues69
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04099
ChainResidueDetails
BASN66
BASN487
BASN592
BASN619
BASN719
BASN774
BASN785
BASN870
BASN1176
BASN1213
BASN1225
BASN104
BASN1241
BASN1256
BASN1277
BASN1288
CASN66
CASN104
CASN125
CASN155
CASN166
CASN222
BASN125
CASN236
CASN244
CASN410
CASN487
CASN592
CASN619
CASN719
CASN774
CASN785
CASN870
BASN155
CASN1176
CASN1213
CASN1225
CASN1241
CASN1256
CASN1277
CASN1288
EASN66
EASN104
EASN125
BASN166
EASN155
EASN166
EASN222
EASN236
EASN244
EASN410
EASN487
EASN592
EASN619
EASN719
BASN222
EASN774
EASN785
EASN870
EASN1176
EASN1213
EASN1225
EASN1241
EASN1256
EASN1277
EASN1288
BASN236
BASN244
BASN410

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PDB entries from 2024-09-04

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