8IFN
MERS-CoV spike trimer in complex with nanobody VHH-T148
Functional Information from GO Data
Chain | GOid | namespace | contents |
B | 0016020 | cellular_component | membrane |
B | 0019031 | cellular_component | viral envelope |
B | 0019064 | biological_process | fusion of virus membrane with host plasma membrane |
B | 0039654 | biological_process | fusion of virus membrane with host endosome membrane |
B | 0046813 | biological_process | receptor-mediated virion attachment to host cell |
B | 0055036 | cellular_component | virion membrane |
B | 0075509 | biological_process | endocytosis involved in viral entry into host cell |
C | 0016020 | cellular_component | membrane |
C | 0019031 | cellular_component | viral envelope |
C | 0019064 | biological_process | fusion of virus membrane with host plasma membrane |
C | 0039654 | biological_process | fusion of virus membrane with host endosome membrane |
C | 0046813 | biological_process | receptor-mediated virion attachment to host cell |
C | 0055036 | cellular_component | virion membrane |
C | 0075509 | biological_process | endocytosis involved in viral entry into host cell |
E | 0016020 | cellular_component | membrane |
E | 0019031 | cellular_component | viral envelope |
E | 0019064 | biological_process | fusion of virus membrane with host plasma membrane |
E | 0039654 | biological_process | fusion of virus membrane with host endosome membrane |
E | 0046813 | biological_process | receptor-mediated virion attachment to host cell |
E | 0055036 | cellular_component | virion membrane |
E | 0075509 | biological_process | endocytosis involved in viral entry into host cell |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 60 |
Details | TRANSMEM: Helical => ECO:0000255|HAMAP-Rule:MF_04099 |
Chain | Residue | Details |
B | GLY1306-VAL1326 | |
C | GLY1306-VAL1326 | |
E | GLY1306-VAL1326 |
site_id | SWS_FT_FI2 |
Number of Residues | 3 |
Details | SITE: Cleavage; by host => ECO:0000250 |
Chain | Residue | Details |
B | GLY751 | |
C | GLY751 | |
E | GLY751 |
site_id | SWS_FT_FI3 |
Number of Residues | 3 |
Details | SITE: Cleavage => ECO:0000255|HAMAP-Rule:MF_04099 |
Chain | Residue | Details |
B | ARG887 | |
C | ARG887 | |
E | ARG887 |
site_id | SWS_FT_FI4 |
Number of Residues | 69 |
Details | CARBOHYD: N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04099 |
Chain | Residue | Details |
B | ASN66 | |
B | ASN487 | |
B | ASN592 | |
B | ASN619 | |
B | ASN719 | |
B | ASN774 | |
B | ASN785 | |
B | ASN870 | |
B | ASN1176 | |
B | ASN1213 | |
B | ASN1225 | |
B | ASN104 | |
B | ASN1241 | |
B | ASN1256 | |
B | ASN1277 | |
B | ASN1288 | |
C | ASN66 | |
C | ASN104 | |
C | ASN125 | |
C | ASN155 | |
C | ASN166 | |
C | ASN222 | |
B | ASN125 | |
C | ASN236 | |
C | ASN244 | |
C | ASN410 | |
C | ASN487 | |
C | ASN592 | |
C | ASN619 | |
C | ASN719 | |
C | ASN774 | |
C | ASN785 | |
C | ASN870 | |
B | ASN155 | |
C | ASN1176 | |
C | ASN1213 | |
C | ASN1225 | |
C | ASN1241 | |
C | ASN1256 | |
C | ASN1277 | |
C | ASN1288 | |
E | ASN66 | |
E | ASN104 | |
E | ASN125 | |
B | ASN166 | |
E | ASN155 | |
E | ASN166 | |
E | ASN222 | |
E | ASN236 | |
E | ASN244 | |
E | ASN410 | |
E | ASN487 | |
E | ASN592 | |
E | ASN619 | |
E | ASN719 | |
B | ASN222 | |
E | ASN774 | |
E | ASN785 | |
E | ASN870 | |
E | ASN1176 | |
E | ASN1213 | |
E | ASN1225 | |
E | ASN1241 | |
E | ASN1256 | |
E | ASN1277 | |
E | ASN1288 | |
B | ASN236 | |
B | ASN244 | |
B | ASN410 |