Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

8FR8

Structure of Mycobacterium smegmatis Rsh bound to a 70S translation initiation complex

This is a non-PDB format compatible entry.

Functional Information from GO Data

Chain	GOid	namespace	contents
0	0003735	molecular_function	structural constituent of ribosome
0	0005840	cellular_component	ribosome
0	0006412	biological_process	translation
0	1990904	cellular_component	ribonucleoprotein complex
1	0003723	molecular_function	RNA binding
1	0003735	molecular_function	structural constituent of ribosome
1	0005840	cellular_component	ribosome
1	0006412	biological_process	translation
1	0019843	molecular_function	rRNA binding
1	1990904	cellular_component	ribonucleoprotein complex
2	0003735	molecular_function	structural constituent of ribosome
2	0005840	cellular_component	ribosome
2	0006412	biological_process	translation
2	0008097	molecular_function	5S rRNA binding
4	0003735	molecular_function	structural constituent of ribosome
4	0005840	cellular_component	ribosome
4	0006412	biological_process	translation
4	0022625	cellular_component	cytosolic large ribosomal subunit
4	1990904	cellular_component	ribonucleoprotein complex
6	0003735	molecular_function	structural constituent of ribosome
6	0005840	cellular_component	ribosome
6	0006412	biological_process	translation
7	0003735	molecular_function	structural constituent of ribosome
7	0005840	cellular_component	ribosome
7	0006412	biological_process	translation
7	0015934	cellular_component	large ribosomal subunit
7	1990904	cellular_component	ribonucleoprotein complex
8	0003735	molecular_function	structural constituent of ribosome
8	0005840	cellular_component	ribosome
8	0006412	biological_process	translation
8	0015934	cellular_component	large ribosomal subunit
8	1990904	cellular_component	ribonucleoprotein complex
9	0003735	molecular_function	structural constituent of ribosome
9	0005840	cellular_component	ribosome
9	0006412	biological_process	translation
9	0015935	cellular_component	small ribosomal subunit
9	0019843	molecular_function	rRNA binding
9	1990904	cellular_component	ribonucleoprotein complex
c	0003735	molecular_function	structural constituent of ribosome
c	0005737	cellular_component	cytoplasm
c	0005840	cellular_component	ribosome
c	0006412	biological_process	translation
c	0022625	cellular_component	cytosolic large ribosomal subunit
c	0043229	cellular_component	intracellular organelle
c	1990904	cellular_component	ribonucleoprotein complex
C	0003735	molecular_function	structural constituent of ribosome
C	0005840	cellular_component	ribosome
C	0006412	biological_process	translation
C	1990904	cellular_component	ribonucleoprotein complex
d	0003723	molecular_function	RNA binding
d	0003735	molecular_function	structural constituent of ribosome
d	0005840	cellular_component	ribosome
d	0006412	biological_process	translation
d	0015935	cellular_component	small ribosomal subunit
D	0003735	molecular_function	structural constituent of ribosome
D	0005737	cellular_component	cytoplasm
D	0005840	cellular_component	ribosome
D	0006412	biological_process	translation
D	0019843	molecular_function	rRNA binding
D	0043229	cellular_component	intracellular organelle
D	1990904	cellular_component	ribonucleoprotein complex
e	0003723	molecular_function	RNA binding
e	0003735	molecular_function	structural constituent of ribosome
e	0005840	cellular_component	ribosome
e	0006412	biological_process	translation
e	0015935	cellular_component	small ribosomal subunit
e	0019843	molecular_function	rRNA binding
e	1990904	cellular_component	ribonucleoprotein complex
f	0003723	molecular_function	RNA binding
f	0003735	molecular_function	structural constituent of ribosome
f	0005840	cellular_component	ribosome
f	0006412	biological_process	translation
f	0015935	cellular_component	small ribosomal subunit
F	0003735	molecular_function	structural constituent of ribosome
F	0005737	cellular_component	cytoplasm
F	0005840	cellular_component	ribosome
F	0006412	biological_process	translation
F	0043229	cellular_component	intracellular organelle
F	1990904	cellular_component	ribonucleoprotein complex
g	0003735	molecular_function	structural constituent of ribosome
g	0005737	cellular_component	cytoplasm
g	0005840	cellular_component	ribosome
g	0006412	biological_process	translation
g	0019843	molecular_function	rRNA binding
g	0043229	cellular_component	intracellular organelle
g	1990904	cellular_component	ribonucleoprotein complex
G	0003676	molecular_function	nucleic acid binding
G	0003723	molecular_function	RNA binding
G	0003735	molecular_function	structural constituent of ribosome
G	0006412	biological_process	translation
h	0000049	molecular_function	tRNA binding
h	0003723	molecular_function	RNA binding
h	0003735	molecular_function	structural constituent of ribosome
h	0005840	cellular_component	ribosome
h	0006412	biological_process	translation
h	0015935	cellular_component	small ribosomal subunit
h	0019843	molecular_function	rRNA binding
h	1990904	cellular_component	ribonucleoprotein complex
H	0003735	molecular_function	structural constituent of ribosome
H	0005840	cellular_component	ribosome
H	0006412	biological_process	translation
H	1990904	cellular_component	ribonucleoprotein complex
i	0003735	molecular_function	structural constituent of ribosome
i	0005737	cellular_component	cytoplasm
i	0005840	cellular_component	ribosome
i	0006412	biological_process	translation
i	0019843	molecular_function	rRNA binding
i	0043229	cellular_component	intracellular organelle
i	1990904	cellular_component	ribonucleoprotein complex
I	0005524	molecular_function	ATP binding
I	0008728	molecular_function	GTP diphosphokinase activity
I	0015969	biological_process	guanosine tetraphosphate metabolic process
I	0015970	biological_process	guanosine tetraphosphate biosynthetic process
I	0016301	molecular_function	kinase activity
j	0000049	molecular_function	tRNA binding
j	0003676	molecular_function	nucleic acid binding
j	0003723	molecular_function	RNA binding
j	0003735	molecular_function	structural constituent of ribosome
j	0005840	cellular_component	ribosome
j	0006412	biological_process	translation
j	0019843	molecular_function	rRNA binding
j	1990904	cellular_component	ribonucleoprotein complex
J	0003735	molecular_function	structural constituent of ribosome
J	0005840	cellular_component	ribosome
J	0006412	biological_process	translation
k	0003735	molecular_function	structural constituent of ribosome
k	0005840	cellular_component	ribosome
k	0006412	biological_process	translation
K	0003723	molecular_function	RNA binding
K	0003735	molecular_function	structural constituent of ribosome
K	0005840	cellular_component	ribosome
K	0006412	biological_process	translation
K	0015934	cellular_component	large ribosomal subunit
K	0016740	molecular_function	transferase activity
K	0019843	molecular_function	rRNA binding
K	1990904	cellular_component	ribonucleoprotein complex
l	0000049	molecular_function	tRNA binding
l	0003723	molecular_function	RNA binding
l	0003735	molecular_function	structural constituent of ribosome
l	0005840	cellular_component	ribosome
l	0006412	biological_process	translation
l	1990904	cellular_component	ribonucleoprotein complex
L	0003735	molecular_function	structural constituent of ribosome
L	0005840	cellular_component	ribosome
L	0006412	biological_process	translation
L	0019843	molecular_function	rRNA binding
L	1990904	cellular_component	ribonucleoprotein complex
m	0003735	molecular_function	structural constituent of ribosome
m	0005840	cellular_component	ribosome
m	0006412	biological_process	translation
M	0003735	molecular_function	structural constituent of ribosome
M	0005840	cellular_component	ribosome
M	0006412	biological_process	translation
M	0019843	molecular_function	rRNA binding
M	1990904	cellular_component	ribonucleoprotein complex
n	0000049	molecular_function	tRNA binding
n	0003735	molecular_function	structural constituent of ribosome
n	0005840	cellular_component	ribosome
n	0006412	biological_process	translation
n	0015935	cellular_component	small ribosomal subunit
n	0019843	molecular_function	rRNA binding
n	1990904	cellular_component	ribonucleoprotein complex
N	0000049	molecular_function	tRNA binding
N	0003735	molecular_function	structural constituent of ribosome
N	0005840	cellular_component	ribosome
N	0006412	biological_process	translation
N	0019843	molecular_function	rRNA binding
N	1990904	cellular_component	ribonucleoprotein complex
o	0003735	molecular_function	structural constituent of ribosome
o	0005840	cellular_component	ribosome
o	0006412	biological_process	translation
o	0019843	molecular_function	rRNA binding
o	0070181	molecular_function	small ribosomal subunit rRNA binding
o	1990904	cellular_component	ribonucleoprotein complex
O	0000049	molecular_function	tRNA binding
O	0003735	molecular_function	structural constituent of ribosome
O	0005840	cellular_component	ribosome
O	0006412	biological_process	translation
O	0019843	molecular_function	rRNA binding
O	1990904	cellular_component	ribonucleoprotein complex
p	0003735	molecular_function	structural constituent of ribosome
p	0005737	cellular_component	cytoplasm
p	0005840	cellular_component	ribosome
p	0006412	biological_process	translation
p	0019843	molecular_function	rRNA binding
p	0043229	cellular_component	intracellular organelle
p	1990904	cellular_component	ribonucleoprotein complex
P	0003735	molecular_function	structural constituent of ribosome
P	0005840	cellular_component	ribosome
P	0006412	biological_process	translation
P	0019843	molecular_function	rRNA binding
P	1990904	cellular_component	ribonucleoprotein complex
q	0003735	molecular_function	structural constituent of ribosome
q	0005840	cellular_component	ribosome
q	0006412	biological_process	translation
Q	0003735	molecular_function	structural constituent of ribosome
Q	0005840	cellular_component	ribosome
Q	0006412	biological_process	translation
Q	0019843	molecular_function	rRNA binding
Q	1990904	cellular_component	ribonucleoprotein complex
r	0003735	molecular_function	structural constituent of ribosome
r	0005840	cellular_component	ribosome
r	0006412	biological_process	translation
r	0019843	molecular_function	rRNA binding
r	1990904	cellular_component	ribonucleoprotein complex
R	0003735	molecular_function	structural constituent of ribosome
R	0006412	biological_process	translation
R	0015934	cellular_component	large ribosomal subunit
S	0003735	molecular_function	structural constituent of ribosome
S	0005840	cellular_component	ribosome
S	0006412	biological_process	translation
S	0019843	molecular_function	rRNA binding
S	0070180	molecular_function	large ribosomal subunit rRNA binding
S	1990904	cellular_component	ribonucleoprotein complex
t	0003723	molecular_function	RNA binding
t	0003735	molecular_function	structural constituent of ribosome
t	0005829	cellular_component	cytosol
t	0005840	cellular_component	ribosome
t	0006412	biological_process	translation
t	0015935	cellular_component	small ribosomal subunit
t	0019843	molecular_function	rRNA binding
t	0070181	molecular_function	small ribosomal subunit rRNA binding
t	1990904	cellular_component	ribonucleoprotein complex
T	0003735	molecular_function	structural constituent of ribosome
T	0005737	cellular_component	cytoplasm
T	0005840	cellular_component	ribosome
T	0006412	biological_process	translation
T	0043229	cellular_component	intracellular organelle
T	1990904	cellular_component	ribonucleoprotein complex
u	0003735	molecular_function	structural constituent of ribosome
u	0005840	cellular_component	ribosome
u	0006412	biological_process	translation
u	0015935	cellular_component	small ribosomal subunit
U	0003735	molecular_function	structural constituent of ribosome
U	0005840	cellular_component	ribosome
U	0006412	biological_process	translation
U	0015934	cellular_component	large ribosomal subunit
U	0019843	molecular_function	rRNA binding
U	1990904	cellular_component	ribonucleoprotein complex
V	0003735	molecular_function	structural constituent of ribosome
V	0005840	cellular_component	ribosome
V	0006412	biological_process	translation
V	0015934	cellular_component	large ribosomal subunit
V	0019843	molecular_function	rRNA binding
V	1990904	cellular_component	ribonucleoprotein complex
W	0000027	biological_process	ribosomal large subunit assembly
W	0003735	molecular_function	structural constituent of ribosome
W	0005840	cellular_component	ribosome
W	0006412	biological_process	translation
W	0019843	molecular_function	rRNA binding
W	1990904	cellular_component	ribonucleoprotein complex
x	0003735	molecular_function	structural constituent of ribosome
x	0005840	cellular_component	ribosome
x	0006412	biological_process	translation
x	1990904	cellular_component	ribonucleoprotein complex
X	0003723	molecular_function	RNA binding
X	0003735	molecular_function	structural constituent of ribosome
X	0005737	cellular_component	cytoplasm
X	0005840	cellular_component	ribosome
X	0006412	biological_process	translation
X	0019843	molecular_function	rRNA binding
X	0043229	cellular_component	intracellular organelle
X	1990904	cellular_component	ribonucleoprotein complex
y	0003735	molecular_function	structural constituent of ribosome
y	0005840	cellular_component	ribosome
y	0006412	biological_process	translation
y	1990904	cellular_component	ribonucleoprotein complex
Y	0003735	molecular_function	structural constituent of ribosome
Y	0005840	cellular_component	ribosome
Y	0006412	biological_process	translation
Y	0015934	cellular_component	large ribosomal subunit
Z	0003735	molecular_function	structural constituent of ribosome
Z	0005840	cellular_component	ribosome
Z	0006412	biological_process	translation
Z	0019843	molecular_function	rRNA binding
Z	0022625	cellular_component	cytosolic large ribosomal subunit
Z	1990904	cellular_component	ribonucleoprotein complex

Functional Information from PROSITE/UniProt

site_id	PS00049
Number of Residues	27
Details	RIBOSOMAL_L14 Ribosomal protein L14 signature. AVVVrtvkerrra.DGsyikFdeNaaVI

Chain	Residue	Details
U	ALA60-ILE86

site_id	PS00050
Number of Residues	16
Details	RIBOSOMAL_L23 Ribosomal protein L23 signature. KRAIVKLAagskpidL

Chain	Residue	Details
Z	LYS80-LEU95

site_id	PS00052
Number of Residues	27
Details	RIBOSOMAL_S7 Ribosomal protein S7 signature. SqLvtqLVnkvlleGKKslaerIVygA

Chain	Residue	Details
h	SER20-ALA46

site_id	PS00053
Number of Residues	18
Details	RIBOSOMAL_S8 Ribosomal protein S8 signature. GvaIISTSsGLLtdrqAA

Chain	Residue	Details
i	GLY102-ALA119

site_id	PS00054
Number of Residues	23
Details	RIBOSOMAL_S11 Ribosomal protein S11 signature. IrSLqaA.GLeVgtisDvTPqPHN

Chain	Residue	Details
m	ILE106-ASN128

site_id	PS00055
Number of Residues	8
Details	RIBOSOMAL_S12 Ribosomal protein S12 signature. KkPNSAlR

Chain	Residue	Details
n	LYS43-ARG50

site_id	PS00056
Number of Residues	13
Details	RIBOSOMAL_S17 Ribosomal protein S17 signature. GDrVsLmEtRPLS

Chain	Residue	Details
r	GLY71-SER83

site_id	PS00057
Number of Residues	24
Details	RIBOSOMAL_S18 Ribosomal protein S18 signature. IDYkd.VavLrtFLSEr.GKIrsrHV

Chain	Residue	Details
o	ILE32-VAL55

site_id	PS00211
Number of Residues	15
Details	ABC_TRANSPORTER_1 ABC transporters family signature. IAVGEARKLGIPVIA

Chain	Residue	Details
u	ILE171-ALA185

site_id	PS00216
Number of Residues	18
Details	SUGAR_TRANSPORT_1 Sugar transport proteins signature 1. TVDKVDIWGRRrlayeiA

Chain	Residue	Details
g	THR36-ALA53

site_id	PS00323
Number of Residues	25
Details	RIBOSOMAL_S19 Ribosomal protein S19 signature. DGRkhvpvfVteamVGhkLGEFapT

Chain	Residue	Details
d	ASP53-THR77

site_id	PS00359
Number of Residues	15
Details	RIBOSOMAL_L11 Ribosomal protein L11 signature. KiIaGTarSMGiTV.E

Chain	Residue	Details
S	LYS128-GLU142

site_id	PS00360
Number of Residues	19
Details	RIBOSOMAL_S9 Ribosomal protein S9 signature. GGGpsGQagAlrlAiARAL

Chain	Residue	Details
k	GLY89-LEU107

site_id	PS00361
Number of Residues	16
Details	RIBOSOMAL_S10 Ribosomal protein S10 signature. VtrtGAsvvGPVpLPT

Chain	Residue	Details
l	VAL29-THR44

site_id	PS00362
Number of Residues	31
Details	RIBOSOMAL_S15 Ribosomal protein S15 signature. LteHLkvhKhDhhSrrgLllLvgrrrrLlkY

Chain	Residue	Details
p	LEU39-TYR69

site_id	PS00464
Number of Residues	25
Details	RIBOSOMAL_L22 Ribosomal protein L22 signature. KriRpRAqGRafrirkrtSHITViV

Chain	Residue	Details
Y	LYS90-VAL114

site_id	PS00467
Number of Residues	12
Details	RIBOSOMAL_L2 Ribosomal protein L2 signature. PtvRGVVmNPvD

Chain	Residue	Details
K	PRO219-ASP230

site_id	PS00474
Number of Residues	24
Details	RIBOSOMAL_L3 Ribosomal protein L3 signature. FsdgayvDvtGtSkGKGfaGtmkR

Chain	Residue	Details
L	PHE106-ARG129

site_id	PS00475
Number of Residues	31
Details	RIBOSOMAL_L15 Ribosomal protein L15 signature. KVLGdGkLtvk..VdVtankFSgsAreaItaaG

Chain	Residue	Details
V	LYS111-GLY141

site_id	PS00525
Number of Residues	9
Details	RIBOSOMAL_L6_1 Ribosomal protein L6 signature 1. PDpYKGKGV

Chain	Residue	Details
P	PRO155-VAL163

site_id	PS00548
Number of Residues	35
Details	RIBOSOMAL_S3 Ribosomal protein S3 signature. SRsefyreGrVplHt..LradIDyglyeakTtfGriG

Chain	Residue	Details
G	SER163-GLY197

site_id	PS00579
Number of Residues	15
Details	RIBOSOMAL_L29 Ribosomal protein L29 signature. NNRRLRtVRQEIARV

Chain	Residue	Details
6	ASN43-VAL57

site_id	PS00582
Number of Residues	20
Details	RIBOSOMAL_L33 Ribosomal protein L33 signature. YvTrKNrrndPdrIVlrKYD

Chain	Residue	Details
c	TYR21-ASP40

site_id	PS00585
Number of Residues	33
Details	RIBOSOMAL_S5 Ribosomal protein S5 signature. GRrfsFtAlvIVGDgk.GmVGvGygkak.EVpa.AI

Chain	Residue	Details
f	GLY53-ILE85

site_id	PS00586
Number of Residues	12
Details	RIBOSOMAL_L16_1 Ribosomal protein L16 signature 1. KRgGKVWINIFP

Chain	Residue	Details
N	LYS59-PRO70

site_id	PS00632
Number of Residues	25
Details	RIBOSOMAL_S4 Ribosomal protein S4 signature. LEsRLdnvVYRaglArTrrmARqLV

Chain	Residue	Details
e	LEU89-VAL113

site_id	PS00634
Number of Residues	33
Details	RIBOSOMAL_L30 Ribosomal protein L30 signature. SLrtLgLkKirQsVvrednaqtrgLIntVhhLV

Chain	Residue	Details
7	SER22-VAL54

site_id	PS00646
Number of Residues	14
Details	RIBOSOMAL_S13_1 Ribosomal protein S13 signature. QGlRHrrGlpVRGQ

Chain	Residue	Details
j	GLN88-GLN101

site_id	PS00651
Number of Residues	28
Details	RIBOSOMAL_L9 Ribosomal protein L9 signature. GaaGdtveVkdGYgrNYLlprglAivaS

Chain	Residue	Details
Q	GLY13-SER40

site_id	PS00701
Number of Residues	12
Details	RIBOSOMAL_L16_2 Ribosomal protein L16 signature 2. RMGsGKGspewW

Chain	Residue	Details
N	ARG82-TRP93

site_id	PS00732
Number of Residues	10
Details	RIBOSOMAL_S16 Ribosomal protein S16 signature. VkIKLTRLGK

Chain	Residue	Details
q	VAL3-LYS12

site_id	PS00784
Number of Residues	20
Details	RIBOSOMAL_L34 Ribosomal protein L34 signature. KRTFQpnnrrRarvh.GFrlR

Chain	Residue	Details
0	LYS5-ARG24

site_id	PS00828
Number of Residues	26
Details	RIBOSOMAL_L36 Ribosomal protein L36 signature. CdkCrvIrRhgrVmViCsdp.RHkQrQ

Chain	Residue	Details
F	CYS11-GLN36

site_id	PS00831
Number of Residues	15
Details	RIBOSOMAL_L27 Ribosomal protein L27 signature. GeILvRQRGthfhpG

Chain	Residue	Details
4	GLY34-GLY48

site_id	PS00936
Number of Residues	27
Details	RIBOSOMAL_L35 Ribosomal protein L35 signature. KTHsGAsKRFrrtgtgkivrqkanr.RH

Chain	Residue	Details
x	LYS5-HIS31

site_id	PS00937
Number of Residues	17
Details	RIBOSOMAL_L20 Ribosomal protein L20 signature. KgefRkLWISRINaaaR

Chain	Residue	Details
W	LYS54-ARG70

site_id	PS00962
Number of Residues	12
Details	RIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. MkQLLDSGAHFG

Chain	Residue	Details
u	MET6-GLY17

site_id	PS01015
Number of Residues	16
Details	RIBOSOMAL_L19 Ribosomal protein L19 signature. VlTrGDVR.RAKLYYLR

Chain	Residue	Details
C	VAL85-ARG100

site_id	PS01048
Number of Residues	10
Details	RIBOSOMAL_S6 Ribosomal protein S6 signature. GrRRLAYeIA

Chain	Residue	Details
g	GLY44-ALA53

site_id	PS01108
Number of Residues	18
Details	RIBOSOMAL_L24 Ribosomal protein L24 signature. GDtVlVIsGkdKGak.GkV

Chain	Residue	Details
1	GLY6-VAL23

site_id	PS01109
Number of Residues	35
Details	RIBOSOMAL_L10 Ribosomal protein L10 signature. KatAvadIAeqfkastatVvtEyrGLTVaNLaeLR

Chain	Residue	Details
R	LYS6-ARG40

site_id	PS01143
Number of Residues	22
Details	RIBOSOMAL_L31 Ribosomal protein L31 signature. DVtsdsHPFWTgsarhidsa....GQ

Chain	Residue	Details
H	ASP52-GLN84

site_id	PS01167
Number of Residues	23
Details	RIBOSOMAL_L17 Ribosomal protein L17 signature. IkTTepKaRalrpyaEkLIThAK

Chain	Residue	Details
J	ILE34-LYS56

site_id	PS01169
Number of Residues	23
Details	RIBOSOMAL_L21 Ribosomal protein L21 signature. IrihKfknKTgyhkrqGHRQqlT

Chain	Residue	Details
X	ILE73-THR95

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	2
Details	CROSSLNK: Isoglutamyl lysine isopeptide (Lys-Gln) (interchain with Q-Cter in protein Pup) => ECO:0000269\|PubMed:20094657

Chain	Residue	Details
r	LYS96

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		Validation report (PDF)